def test_report_subject():
"""Generating a report for one subject should only return one subject's
description (i.e., one pattern with a count of one).
"""
report = BIDSReport(testlayout())
descriptions = report.generate(subject='01')
assert sum(descriptions.values()) == 1
def test_report_session():
"""Generating a report for one session should mean that no other sessions
appear in any of the unique descriptions.
"""
report = BIDSReport(testlayout())
descriptions = report.generate(session='01')
assert 'session 02' not in ' '.join(descriptions.keys())
def test_report_session(testlayout):
"""Generating a report for one session should mean that no other sessions
appear in any of the unique descriptions.
"""
report = BIDSReport(testlayout)
descriptions = report.generate(session="01")
assert "session 02" not in " ".join(descriptions.keys())
def test_report_gen():
"""Report generation should return a counter of unique descriptions in the
dataset.
"""
report = BIDSReport(testlayout())
descriptions = report.generate()
assert isinstance(descriptions, Counter)
def test_report_session(testlayout):
"""Generating a report for one session should mean that no other sessions
appear in any of the unique descriptions.
"""
report = BIDSReport(testlayout)
descriptions = report.generate(session='01')
assert 'session 02' not in ' '.join(descriptions.keys())
def test_report_subject(testlayout):
"""Generating a report for one subject should only return one subject's
description (i.e., one pattern with a count of one).
"""
report = BIDSReport(testlayout)
descriptions = report.generate(subject='01')
assert sum(descriptions.values()) == 1
def test_report_gen(testlayout):
"""Report generation should return a counter of unique descriptions in the
dataset.
"""
report = BIDSReport(testlayout)
descriptions = report.generate()
assert isinstance(descriptions, Counter)
def test_report_file_config():
"""Report initialization should take in a config file and use that if provided.
"""
config_file = abspath(
join(get_test_data_path(), '../../reports/config/converters.json'))
report = BIDSReport(testlayout(), config=config_file)
descriptions = report.generate()
assert isinstance(descriptions, Counter)
def test_report_file_config(testlayout):
"""Report initialization should take in a config file and use that if
provided.
"""
config_file = abspath(join(get_test_data_path(),
'../../reports/config/converters.json'))
report = BIDSReport(testlayout, config=config_file)
descriptions = report.generate()
assert isinstance(descriptions, Counter)
def test_report_dict_config():
"""Report initialization should take in a config dict and use that if provided.
"""
config_file = abspath(
join(get_test_data_path(), '../../reports/config/converters.json'))
with open(config_file, 'r') as fobj:
config = json.load(fobj)
report = BIDSReport(testlayout(), config=config)
descriptions = report.generate()
assert isinstance(descriptions, Counter)
def test_report_dict_config(testlayout):
"""Report initialization should take in a config dict and use that if
provided.
"""
config_file = abspath(join(get_test_data_path(),
'../../reports/config/converters.json'))
with open(config_file, 'r') as fobj:
config = json.load(fobj)
report = BIDSReport(testlayout, config=config)
descriptions = report.generate()
assert isinstance(descriptions, Counter)
