def __init__(self, context, request):
SE.__init__(self, context, request)
if IAliquot.providedBy(context):
self.icon = self.portal_url + \
"/++resource++bika.sanbi.images/aliquot_big.png"
elif IBiospecimen.providedBy(context):
self.icon = self.portal_url + \
"/++resource++bika.sanbi.images/biospecimen_big.png"
self.allow_edit = True
def __init__(self, context):
self.context = context
self.sort = 10
self.random = 4
if IAliquot.providedBy(context):
self.hidden_fields = ['Kit', 'SubjectID',
'Barcode', 'Sampling Date',
'ScheduledSamplingSampler',
'PreparationWorkflow',
'SamplePoint', 'Sampler']
if IBiospecimen.providedBy(context):
self.hidden_fields = ['Sampling Date',
'LinkedSample',
'ScheduledSamplingSampler',
'PreparationWorkflow',
'SamplePoint', 'Sampler']
def folderitems(self, full_objects=False):
items = BikaListingView.folderitems(self)
bsc = getToolByName(self.context, 'bika_setup_catalog')
brains = bsc(portal_type='SampleType', inactive_state='active')
aliquot_types = [
{
'ResultValue': brain.UID,
'ResultText': brain.title
}
for brain in brains
]
ret = []
for x, item in enumerate(items):
if not items[x].has_key('obj'):
continue
obj = items[x]['obj']
if not IAliquot.providedBy(obj):
continue
items[x]['replace']['Biospecimen'] = \
"<a href='%s'>%s</a>" % (obj.getField('LinkedSample').get(obj).absolute_url(),
obj.getField('LinkedSample').get(obj).Title())
items[x]['AliquotType'] = obj.getSampleType() and obj.getSampleType().Title() or ''
items[x]['Volume'] = items[x]['Volume'] = obj.getField('Volume').get(obj)
items[x]['Unit'] = VOLUME_UNITS[0]['ResultText']
items[x]['replace']['Title'] = "<a href='%s'>%s</a>" % \
(items[x]['url'], items[x]['Title'])
if self.context.portal_type == 'Aliquots':
items[x]['replace']['Project'] = \
'<a href="%s">%s</a>' % (obj.aq_parent.absolute_url(),
obj.aq_parent.Title())
if self.allow_edit and isActive(self.context) and \
getSecurityManager().checkPermission("Modify portal content", obj) and \
items[x]['review_state'] == "sample_due":
items[x]['allow_edit'] = ['AliquotType', 'Volume', 'Unit']
items[x]['choices']['AliquotType'] = aliquot_types
items[x]['choices']['Unit'] = VOLUME_UNITS
ret.append(item)
return ret
def folderitems(self, full_objects=False):
items = BikaListingView.folderitems(self)
bsc = getToolByName(self.context, 'bika_setup_catalog')
brains = bsc(portal_type='SampleType', inactive_state='active')
aliquot_types = [{
'ResultValue': brain.UID,
'ResultText': brain.title
} for brain in brains]
ret = []
for x, item in enumerate(items):
if not items[x].has_key('obj'):
continue
obj = items[x]['obj']
if not IAliquot.providedBy(obj):
continue
items[x]['replace']['Biospecimen'] = \
"<a href='%s'>%s</a>" % (obj.getField('LinkedSample').get(obj).absolute_url(),
obj.getField('LinkedSample').get(obj).Title())
items[x]['AliquotType'] = obj.getSampleType(
) and obj.getSampleType().Title() or ''
items[x]['Volume'] = items[x]['Volume'] = obj.getField(
'Volume').get(obj)
items[x]['Unit'] = VOLUME_UNITS[0]['ResultText']
items[x]['replace']['Title'] = "<a href='%s'>%s</a>" % \
(items[x]['url'], items[x]['Title'])
if self.context.portal_type == 'Aliquots':
items[x]['replace']['Project'] = \
'<a href="%s">%s</a>' % (obj.aq_parent.absolute_url(),
obj.aq_parent.Title())
if self.allow_edit and isActive(self.context) and \
getSecurityManager().checkPermission("Modify portal content", obj) and \
items[x]['review_state'] == "sample_due":
items[x]['allow_edit'] = ['AliquotType', 'Volume', 'Unit']
items[x]['choices']['AliquotType'] = aliquot_types
items[x]['choices']['Unit'] = VOLUME_UNITS
ret.append(item)
return ret
