def __init__(self, *args, **kw):
super(SegmentationDialog, self).__init__(*args, **kw)
loadUI(splitext(__file__)[0]+'.ui', self)
self.setWindowFlags(Qt.Tool)
self.norm.setText("Intesity Norm. ")
self._setupPrimaryMasks()
# row count (rowCount from gridlayout is not reliable!)
self._rcount = 1
self.pchannel.currentIndexChanged[str].connect(self.onChannelChanged)
self.loadBtn.clicked.connect(self.onLoadBtn)
self.saveBtn.clicked.connect(self.onSaveBtn)
self.zsliceMethod.addItems(ZProject.names())
self.zsliceMethod.currentIndexChanged.connect(
self.onZSliceMethodChanged)
self.zslice.valueChanged.connect(self.emitImageUpdate)
self.pmask.currentIndexChanged.connect(self.emitParamsChanged)
self.pmask.currentIndexChanged.connect(self.pmaskShow)
def __init__(self, *args, **kw):
super(ImportDialog, self).__init__(*args, **kw)
loadUI(splitext(__file__)[0] + ".ui", self)
self.zsliceMethod.addItems(ZProject.names())
self.zsliceMethod.currentIndexChanged.connect(self.onZSliceMethodChanged)
self.pool = None
self._pool_running = False
for name, scn in FileScanner.iterclasses():
self.structType.addItem(scn.icon(), name)
self.structType.setIconSize(QtCore.QSize(48, 24))
self._files = None
self._regex = None
self.progressBar.hide()
self.segdlg = SegmentationDialog(self)
self.segdlg.hide()
self.zslice.valueChanged.connect(self.segdlg.setZSlice)
self.segdlg.zslice.valueChanged.connect(self.zslice.setValue)
self.zsliceMethod.currentIndexChanged.connect(self.segdlg.zsliceMethod.setCurrentIndex)
self.segdlg.zsliceMethod.currentIndexChanged.connect(self.zsliceMethod.setCurrentIndex)
self.viewer.setSizePolicy(QtWidgets.QSizePolicy.MinimumExpanding, QtWidgets.QSizePolicy.MinimumExpanding)
self.cbar = ChannelBar(self, self.viewer)
self.cbox.addWidget(self.cbar)
self.cbar.newPixmap.connect(self.viewer.showPixmap, Qt.DirectConnection)
self.cbar.newContourImage.connect(self.viewer.contourImage)
self.cbar.colorsChanged.connect(self.segdlg.updateRowColors)
self.dataFileBtn.clicked.connect(self.onOpenOutFile)
self.imageDirBtn.clicked.connect(self.onOpenImageDir)
self.startBtn.clicked.connect(self.raw2hdf)
self.closeBtn.clicked.connect(self.close)
self.closeBtn.clicked.connect(self.cbar.clear)
self.segmentationBtn.clicked.connect(self.onSegmentationBtn)
self.slider.newValue.connect(self.showObjects)
self.slider.valueChanged.connect(self.showImage)
self.slider.sliderReleased.connect(self.showObjects)
self.slider.sliderPressed.connect(self.cbar.clearContours)
self.contoursCb.stateChanged.connect(self.onContours)
self.showBBoxes.stateChanged.connect(self.onBBoxes)
self.showBBoxes.stateChanged.connect(self.showObjects)
self.segdlg.paramsChanged.connect(self.showObjects)
self.segdlg.refreshBtn.clicked.connect(self.showObjects)
self.segdlg.imageUpdate.connect(self.showImage)
self.segdlg.activateChannels.connect(self.cbar.activateChannels)
self.segdlg.changeColor.connect(self.cbar.setColor)
self.nextBtn.clicked.connect(self.onNextBtn)
self.prevBtn.clicked.connect(self.onPrevBtn)
self.reloadBtn.clicked.connect(self.onReloadBtn)
self.setProgressRange.connect(self.progressBar.setRange)
self.setProgress.connect(self.progressBar.setValue, Qt.DirectConnection)