def test_set_stack_group_fills_scale(default_kwargs):
"""Test that a stack group's scale is populated with a default when not explicitly given"""
new_stack_group = 5
kwargs = dict(default_kwargs)
del kwargs["stack_group_id"]
catmaid_url = CatmaidUrl(**default_kwargs)
catmaid_url.set_stack_group(new_stack_group)
assert "sg={}&sgs={}".format(new_stack_group, SCALE) in str(catmaid_url)
def test_different_tool_ignores_active(default_kwargs):
"""Test that tool-specific arguments are ignored when using a different tool"""
kwargs = dict(default_kwargs)
kwargs["tool"] = "not_tracingtool"
url_str = str(CatmaidUrl(**kwargs))
assert "active" not in url_str
def test_ignores_unfilled_coords(default_kwargs):
"""Test that if any of the 3 coords are missing, all are ignored, and a warning is raised"""
kwargs = dict(default_kwargs)
del kwargs["x"]
with pytest.warns(UserWarning, match="ignoring"):
url_str = str(CatmaidUrl(**kwargs))
for dim in "xyz":
assert dim + "p" not in url_str
def test_from_catmaid(catmaid_mock, default_kwargs, default_url):
"""Test that a CatmaidUrl object instantiated from a CatmaidClient-like object is the same as using args"""
kwargs = dict(default_kwargs)
del kwargs["base_url"]
del kwargs["project_id"]
catmaid_url = CatmaidUrl.from_catmaid(catmaid_mock, **kwargs)
assert str(catmaid_url) == str(default_url)
def test_instantiate(default_url):
"""Test that the object can be instantiated"""
catmaid_url = CatmaidUrl(
BASE_URL,
PROJECT_ID,
STACK_GROUP_ID,
STACK_ID,
SCALE,
X,
Y,
Z,
TOOL,
ACTIVE_SKELETON_ID,
ACTIVE_NODE_ID,
)
assert str(catmaid_url) == str(default_url)
def default_url(default_kwargs):
return CatmaidUrl(**default_kwargs)
def test_from_url(default_url):
"""Test that a CatmaidUrl object instantiated using from_str is the same as using the args"""
from_str = CatmaidUrl.from_url(str(default_url))
assert str(default_url) == str(from_str)