def alive(event, context):
"""
tells us if the db server is alive
"""
try:
connect(True)
return success()
except Exception as e:
return server_error(e, status_code=http.HTTPStatus.SERVICE_UNAVAILABLE)
import http
import sys
import urllib.parse
import simplejson as json
from loguru import logger
from cis import database, headers
from cis.database import connect
conn = database.connect()
# initialize the loguru logger
logger.add(sys.stdout,
format="{time} {level} {message}",
filter="compounds",
level="INFO",
backtrace=True,
diagnose=True)
TARGET_TYPE = ['confirmed', 'unconfirmed', 'istd']
MAX_QUERY_LIMIT = 150
column_dict = {
'tgt_id': {
'name': 'id',
'idx': 1
},
'name': {
'name': 'name',
'idx': 2
def conn(requireMocking):
c = database.connect()
return c