def _setup(self):
log.debug("Running GalaxyReportsService _setup")
reports_option_manager = DirectoryGalaxyOptionManager(self.app,
conf_dir=self.conf_dir,
conf_file_name='reports_wsgi.ini')
reports_option_manager.setup()
file_path = os.path.join(self.app.path_resolver.galaxy_data, "files")
misc.make_dir(file_path, owner='galaxy')
new_file_path = os.path.join(self.app.path_resolver.galaxy_data, "tmp")
main_props = {
'database_connection': "postgres://galaxy@localhost:{0}/galaxy"
.format(self.app.path_resolver.psql_db_port),
'filter-with': 'proxy-prefix',
'file_path': file_path,
'new_file_path': new_file_path
}
proxy_props = {
'use': 'egg:PasteDeploy#prefix',
'prefix': '/reports',
}
reports_option_manager.set_properties(main_props, section='app:main',
description='app_main_props')
reports_option_manager.set_properties(proxy_props,
section='filter:proxy-prefix',
description='proxy_prefix_props')
def _setup(self):
log.debug("Running GalaxyReportsService _setup")
reports_option_manager = DirectoryGalaxyOptionManager(
self.app,
conf_dir=self.conf_dir,
conf_file_name='reports_wsgi.ini')
reports_option_manager.setup()
file_path = os.path.join(self.app.path_resolver.galaxy_data, "files")
misc.make_dir(file_path, owner='galaxy')
new_file_path = os.path.join(self.app.path_resolver.galaxy_data, "tmp")
main_props = {
'database_connection':
"postgres://galaxy@localhost:{0}/galaxy".format(
self.app.path_resolver.psql_db_port),
'filter-with':
'proxy-prefix',
'file_path':
file_path,
'new_file_path':
new_file_path
}
proxy_props = {
'use': 'egg:PasteDeploy#prefix',
'prefix': '/reports',
}
reports_option_manager.set_properties(main_props,
section='app:main',
description='app_main_props')
reports_option_manager.set_properties(proxy_props,
section='filter:proxy-prefix',
description='proxy_prefix_props')
def _setup(self):
log.debug("Running GalaxyReportsService _setup")
reports_option_manager = DirectoryGalaxyOptionManager(self.app,
conf_dir=self.conf_dir, conf_file_name='reports_wsgi.ini')
reports_option_manager.setup()
main_props = {
# Place dummy database_connection for run_reports.sh's --sync-config option to replace
'database_connection': 'dummy',
'filter-with': 'proxy-prefix',
}
proxy_props = {
'use': 'egg:PasteDeploy#prefix',
'prefix': '/reports',
}
reports_option_manager.set_properties(main_props, section='app:main',
description='app_main_props')
reports_option_manager.set_properties(proxy_props, section='filter:proxy-prefix',
description='proxy_prefix_props')
def _setup(self):
log.debug("Running GalaxyReportsService _setup")
reports_option_manager = DirectoryGalaxyOptionManager(
self.app, conf_dir=self.conf_dir, conf_file_name='reports.ini')
reports_option_manager.setup()
file_path = os.path.join(self.app.path_resolver.galaxy_data, "files")
misc.make_dir(file_path, owner='galaxy')
new_file_path = os.path.join(self.app.path_resolver.galaxy_data, "tmp")
main_props = {
'database_connection':
"postgres://galaxy@localhost:{0}/galaxy".format(
self.app.path_resolver.psql_db_port),
'filter-with':
'proxy-prefix',
'file_path':
file_path,
'new_file_path':
new_file_path,
'paste.app_factory':
'galaxy.webapps.reports.buildapp:app_factory',
'use_new_layout':
'true'
}
proxy_props = {
'use': 'egg:PasteDeploy#prefix',
'prefix': '/reports',
}
server_props = {
'use': "egg:Paste#http",
'port': 9001,
'host': '127.0.0.1',
'use_threadpool': 'true',
'threadpool_workers': 10
}
reports_option_manager.set_properties(server_props,
section='server:main',
description='server_main_props')
reports_option_manager.set_properties(main_props,
section='app:main',
description='app_main_props')
reports_option_manager.set_properties(proxy_props,
section='filter:proxy-prefix',
description='proxy_prefix_props')
def _setup(self):
log.debug("Running GalaxyReportsService _setup")
reports_option_manager = DirectoryGalaxyOptionManager(self.app,
conf_dir=self.conf_dir,
conf_file_name='reports.ini')
reports_option_manager.setup()
file_path = os.path.join(self.app.path_resolver.galaxy_data, "files")
misc.make_dir(file_path, owner='galaxy')
new_file_path = os.path.join(self.app.path_resolver.galaxy_data, "tmp")
main_props = {
'database_connection': "postgres://galaxy@localhost:{0}/galaxy"
.format(self.app.path_resolver.psql_db_port),
'filter-with': 'proxy-prefix',
'file_path': file_path,
'new_file_path': new_file_path,
'paste.app_factory': 'galaxy.webapps.reports.buildapp:app_factory',
'use_new_layout': 'true'
}
proxy_props = {
'use': 'egg:PasteDeploy#prefix',
'prefix': '/reports',
}
server_props = {
'use': "egg:Paste#http",
'port': 9001,
'host': '127.0.0.1',
'use_threadpool': 'true',
'threadpool_workers': 10
}
reports_option_manager.set_properties(server_props, section='server:main',
description='server_main_props')
reports_option_manager.set_properties(main_props, section='app:main',
description='app_main_props')
reports_option_manager.set_properties(proxy_props,
section='filter:proxy-prefix',
description='proxy_prefix_props')