def build_matlab():
global release
amalgamate(core_files + ['src/coco_c_runtime.c'], 'build/matlab/coco.c', release)
copy_file('src/coco.h', 'build/matlab/coco.h')
write_file(hg_revision(), "build/matlab/REVISION")
write_file(hg_version(), "build/matlab/VERSION")
run('build/matlab', ['matlab', '-nodisplay', '-nosplash', '-r', 'setup, exit'])
def build_matlab():
global release
amalgamate(core_files + ['code-experiments/src/coco_runtime_r.c'], 'code-experiments/build/matlab/coco.c', release)
copy_file('code-experiments/src/coco.h', 'code-experiments/build/matlab/coco.h')
write_file(git_revision(), "code-experiments/build/matlab/REVISION")
write_file(git_version(), "code-experiments/build/matlab/VERSION")
run('code-experiments/build/matlab', ['octave', '-nodisplay', '-nosplash', '-r', 'setup, exit'])
def run_c():
""" Builds and runs the example experiment in C """
build_c()
try:
run('code-experiments/build/c', ['./example_experiment'])
except subprocess.CalledProcessError:
sys.exit(-1)
def test_octave():
""" Builds and runs the test in Octave, which is equal to the example experiment """
build_octave()
try:
run('code-experiments/build/matlab', ['octave', '--no-gui', 'exampleexperiment.m'])
except subprocess.CalledProcessError:
sys.exit(-1)
def run_c_unit_tests():
""" Runs unit tests in C """
try:
run('code-experiments/test/unit-test', ['./unit_test'],
verbose=_verbosity)
except subprocess.CalledProcessError:
sys.exit(-1)
def leak_check():
build_c_integration_tests()
os.environ['CFLAGS'] = '-g -Os'
valgrind_cmd = ['valgrind', '--error-exitcode=1', '--track-origins=yes',
'--leak-check=full', '--show-reachable=yes',
'./test_coco', 'bbob2009_testcases.txt']
run('code-experiments/test/integration-test', valgrind_cmd)
def run_octave():
# remove the mex files for a clean compilation first
print('CLEAN\tmex files from code-experiments/build/matlab/')
for filename in glob.glob('code-experiments/build/matlab/*.mex*'):
os.remove(filename)
# Copy octave-coco.bat to the Octave folder under Windows to allow
# calling Octave from command line without messing up the system.
# Note that 'win32' stands for both Windows 32-bit and 64-bit.
if 'win32' in sys.platform:
print('SEARCH\tfor Octave folder from C:\\ (can take some time)')
lookfor = 'octave.bat'
for root, dirs, files in os.walk('C:\\'):
if lookfor in files:
break
copy_file('code-experiments/build/matlab/octave_coco.bat.in', join(root, 'octave_coco.bat'))
# amalgamate, copy, and build
build_octave()
if 'win32' in sys.platform:
run('code-experiments/build/matlab',
['octave_coco.bat', '--no-gui', 'exampleexperiment.m'], verbose=_verbosity)
else:
run('code-experiments/build/matlab',
['octave', '--no-gui', 'exampleexperiment.m'], verbose=_verbosity)
def run_c_example_tests():
""" Runs an example experiment test in C """
try:
run('code-experiments/test/example-test', ['./example_experiment'],
verbose=_verbosity)
except subprocess.CalledProcessError:
sys.exit(-1)
def run_java():
""" Builds and runs the example experiment in Java """
build_java()
try:
run('code-experiments/build/java', ['java', '-Djava.library.path=.', 'ExampleExperiment'], verbose=verbosity)
except subprocess.CalledProcessError:
sys.exit(-1)
def run_c():
""" Builds and runs the example experiment in C """
build_c()
try:
run('code-experiments/build/c', ['./example_experiment'], verbose=_verbosity)
except subprocess.CalledProcessError:
sys.exit(-1)
def build_matlab_sms():
global release
join = os.path.join
source_folder = join('code-experiments', 'build', 'matlab')
destination_folder = join('code-experiments', 'examples',
'bbob-biobj-matlab-smsemoa')
# amalgamate and copy files
amalgamate(core_files + ['code-experiments/src/coco_runtime_c.c'],
join(destination_folder, 'coco.c'), release)
copy_file('code-experiments/src/coco.h', 'code-experiments/examples/bbob-biobj-matlab-smsemoa/coco.h')
write_file(git_revision(), join(destination_folder, "REVISION"))
write_file(git_version(), join(destination_folder, "VERSION"))
files = ['cocoEvaluateFunction.c',
'cocoObserver.c',
'cocoObserverFree.c',
'cocoProblemGetDimension.c',
'cocoProblemGetEvaluations.c',
'cocoProblemGetId.c',
'cocoProblemGetLargestValuesOfInterest.c',
'cocoProblemGetName.c',
'cocoProblemGetNumberOfObjectives.c',
'cocoProblemGetSmallestValuesOfInterest.c',
'cocoProblemIsValid.c',
'cocoSuite.c',
'cocoSuiteFree.c',
'cocoSuiteGetNextProblem.c']
for file in files:
copy_file(join(source_folder, file),
join(destination_folder, file))
# compile
run('code-experiments/examples/bbob-biobj-matlab-smsemoa', ['matlab', '-nodisplay', '-nosplash', '-r', 'setup, exit'])
def leak_check():
""" Performs a leak check in C """
build_c()
build_c_integration_tests()
os.environ['CFLAGS'] = '-g -Os'
valgrind_cmd = ['valgrind', '--error-exitcode=1', '--track-origins=yes',
'--leak-check=full', '--show-reachable=yes',
'--gen-suppressions=yes',
'./test_bbob-largescale', 'leak_check']
run('code-experiments/test/integration-test', valgrind_cmd, verbose=_verbosity)
valgrind_cmd = ['valgrind', '--error-exitcode=1', '--track-origins=yes',
'--leak-check=full', '--show-reachable=yes',
'--gen-suppressions=yes',
'./test_bbob-mixint', 'leak_check']
run('code-experiments/test/integration-test', valgrind_cmd, verbose=_verbosity)
valgrind_cmd = ['valgrind', '--error-exitcode=1', '--track-origins=yes',
'--leak-check=full', '--show-reachable=yes',
'--gen-suppressions=yes',
'./test_coco', 'bbob2009_testcases.txt']
run('code-experiments/test/integration-test', valgrind_cmd, verbose=_verbosity)
valgrind_cmd = ['valgrind', '--error-exitcode=1', '--track-origins=yes',
'--leak-check=full', '--show-reachable=yes',
'--gen-suppressions=yes',
'./test_biobj', 'leak_check']
run('code-experiments/test/integration-test', valgrind_cmd, verbose=_verbosity)
valgrind_cmd = ['valgrind', '--error-exitcode=1', '--track-origins=yes',
'--leak-check=full', '--show-reachable=yes',
'--gen-suppressions=yes',
'./test_bbob-constrained', 'leak_check']
run('code-experiments/test/integration-test', valgrind_cmd, verbose=_verbosity)
def build_python():
_prep_python()
## Force distutils to use Cython
# os.environ['USE_CYTHON'] = 'true'
# python('code-experiments/build/python', ['setup.py', 'sdist'])
# python(join('code-experiments', 'build', 'python'), ['setup.py', 'install', '--user'])
run(join('code-experiments', 'build', 'python'), ['python', 'setup.py', 'install', '--user'])
def test_java():
""" Builds and runs the test in Java, which is equal to the example experiment """
build_java()
try:
run('code-experiments/build/java', ['java', '-Djava.library.path=.', 'ExampleExperiment'])
except subprocess.CalledProcessError:
sys.exit(-1)
def test_java():
""" Builds and runs the test in Java, which is equal to the example experiment """
build_java()
try:
run('code-experiments/build/java', ['java', '-Djava.library.path=.', 'ExampleExperiment'], verbose=verbosity)
except subprocess.CalledProcessError:
sys.exit(-1)
def run_octave_sms():
""" Builds and runs the SMS-EMOA in Octave
Note: does not work yet with all Windows/Octave versions.
"""
print(
'CLEAN\tmex files from code-experiments/examples/bbob-biobj-matlab-smsemoa/'
)
destination_folder = 'code-experiments/examples/bbob-biobj-matlab-smsemoa'
# remove the mex files for a clean compilation first
for filename in glob.glob(join(destination_folder, '*.mex*')):
os.remove(filename)
# amalgamate, copy, and build
build_octave_sms()
wait_for_compilation_to_finish(join(destination_folder, 'paretofront'))
# run after compilation finished
if 'win32' in sys.platform:
run(destination_folder,
['octave_coco.bat', '-nogui', 'run_smsemoa_on_bbob_biobj.m'],
verbose=_verbosity)
else:
run(destination_folder,
['octave', '-nogui', 'run_smsemoa_on_bbob_biobj.m'],
verbose=_verbosity)
def build_python():
_prep_python()
## Force distutils to use Cython
# os.environ['USE_CYTHON'] = 'true'
# python('code-experiments/build/python', ['setup.py', 'sdist'])
# python(join('code-experiments', 'build', 'python'), ['setup.py', 'install', '--user'])
run(join('code-experiments', 'build', 'python'),
['python', 'setup.py', 'install', '--user'])
def test_c():
build_c()
try:
make("build/c", "clean")
make("build/c", "all")
run('build/c', ['./coco_test', 'bbob2009_testcases.txt'])
except subprocess.CalledProcessError:
sys.exit(-1)
def run_octave():
# remove the mex files for a clean compilation first
print('CLEAN\t mex files from code-experiments/build/matlab/')
for filename in glob.glob('code-experiments/build/matlab/*.mex*'):
os.remove(filename)
# amalgamate, copy, and build
build_octave()
run('code-experiments/build/matlab', ['octave', '--no-gui', 'exampleexperiment.m'])
def run_matlab_sms():
# remove the mex files for a clean compilation first
for filename in glob.glob('code-experiments/examples/bbob-biobj-matlab-smsemoa/*.mex*') :
os.remove( filename )
# amalgamate, copy, and build
build_matlab_sms()
wait_for_compilation_to_finish('./code-experiments/examples/bbob-biobj-matlab-smsemoa/paretofront')
# run after compilation finished
run('code-experiments/examples/bbob-biobj-matlab-smsemoa', ['matlab', '-nodisplay', '-nosplash', '-r', 'run_smsemoa_on_bbob_biobj, exit'])
def run_matlab():
# remove the mex files for a clean compilation first
for filename in glob.glob('code-experiments/build/matlab/*.mex*') :
os.remove( filename )
# amalgamate, copy, and build
build_matlab()
wait_for_compilation_to_finish('./code-experiments/build/matlab/cocoProblemIsValid')
# run after compilation finished
run('code-experiments/build/matlab', ['matlab', '-nodisplay', '-nosplash', '-r', 'exampleexperiment, exit'])
def run_java():
""" Builds and runs the example experiment in Java """
build_java()
try:
run('code-experiments/build/java',
['java', '-classpath', '.', '-Djava.library.path=.', 'ExampleExperiment'],
verbose=_verbosity)
except subprocess.CalledProcessError:
sys.exit(-1)
def build_matlab():
"""Builds MATLAB example in build/matlab/ but not the one in examples/."""
global release
amalgamate(core_files + ['code-experiments/src/coco_runtime_matlab.c'], 'code-experiments/build/matlab/coco.c', release)
copy_file('code-experiments/src/coco.h', 'code-experiments/build/matlab/coco.h')
write_file(git_revision(), "code-experiments/build/matlab/REVISION")
write_file(git_version(), "code-experiments/build/matlab/VERSION")
run('code-experiments/build/matlab', ['matlab', '-nodisplay', '-nosplash', '-r', 'setup, exit'])
def build_octave():
"""Builds example in build/matlab/ with GNU Octave but not the one in examples/."""
global release
amalgamate(core_files + ['code-experiments/src/coco_runtime_c.c'], 'code-experiments/build/matlab/coco.c', release)
copy_file('code-experiments/src/coco.h', 'code-experiments/build/matlab/coco.h')
write_file(git_revision(), "code-experiments/build/matlab/REVISION")
write_file(git_version(), "code-experiments/build/matlab/VERSION")
run('code-experiments/build/matlab', ['octave', '--no-gui', 'setup.m'])
def leak_check():
build_c()
os.environ['CFLAGS'] = '-g -Os'
make("build/c", "clean")
make("build/c", "all")
valgrind_cmd = ['valgrind', '--error-exitcode=1', '--track-origins=yes',
'--leak-check=full', '--show-reachable=yes',
'./coco_test', 'bbob2009_testcases.txt']
run('build/c', valgrind_cmd)
def build_r():
global release
copy_tree('build/r/skel', 'build/r/pkg')
amalgamate(core_files + ['src/coco_r_runtime.c'], 'build/r/pkg/src/coco.c',
release)
copy_file('src/coco.h', 'build/r/pkg/src/coco.h')
expand_file('build/r/pkg/DESCRIPTION.in', 'build/r/pkg/DESCRIPTION',
{'COCO_VERSION': hg_version()}) # FIXME: it seems that this doesn't work, because it writes '0.0.789' instead of 0.0.789
rscript('build/r/', ['tools/roxygenize'])
run('build/r', ['R', 'CMD', 'build', 'pkg'])
def test_octave():
""" Builds and runs the test in Octave, which is equal to the example experiment """
build_octave()
try:
if ('win32' in sys.platform):
run('code-experiments/build/matlab', ['octave_coco.bat', '--no-gui', 'exampleexperiment.m'],
verbose=verbosity)
else:
run('code-experiments/build/matlab', ['octave', '--no-gui', 'exampleexperiment.m'], verbose=verbosity)
except subprocess.CalledProcessError:
sys.exit(-1)
def run_matlab():
""" Builds and runs the example experiment in build/matlab/ in MATLAB """
print('CLEAN\tmex files from code-experiments/build/matlab/')
# remove the mex files for a clean compilation first
for filename in glob.glob('code-experiments/build/matlab/*.mex*'):
os.remove(filename)
# amalgamate, copy, and build
build_matlab()
wait_for_compilation_to_finish('./code-experiments/build/matlab/cocoCall')
# run after compilation finished
run('code-experiments/build/matlab', ['matlab', '-nodisplay', '-nosplash', '-r', 'exampleexperiment, exit'])
def run_python(test=True):
""" Builds and installs the Python module `cocoex` and runs the
`example_experiment.py` as a simple test case. """
build_python()
try:
if test:
run(os.path.join('code-experiments', 'build', 'python'), ['python', 'coco_test.py'])
run(os.path.join('code-experiments', 'build', 'python'),
['python', 'example_experiment.py'])
except subprocess.CalledProcessError:
sys.exit(-1)
def test_octave():
""" Builds and runs the test in Octave, which is equal to the example experiment """
build_octave()
try:
if ('win32' in sys.platform):
run('code-experiments/build/matlab', ['octave_coco.bat', '--no-gui', 'exampleexperiment.m'],
verbose=verbosity)
else:
run('code-experiments/build/matlab', ['octave', '--no-gui', 'exampleexperiment.m'], verbose=verbosity)
except subprocess.CalledProcessError:
sys.exit(-1)
def build_matlab():
"""Builds MATLAB example in build/matlab/ but not the one in examples/."""
global release
amalgamate(core_files + ['code-experiments/src/coco_runtime_matlab.c'], 'code-experiments/build/matlab/coco.c',
release, {"COCO_VERSION": git_version(pep440=True)})
expand_file('code-experiments/src/coco.h', 'code-experiments/build/matlab/coco.h',
{'COCO_VERSION': git_version(pep440=True)})
write_file(git_revision(), "code-experiments/build/matlab/REVISION")
write_file(git_version(), "code-experiments/build/matlab/VERSION")
run('code-experiments/build/matlab', ['matlab', '-nodisplay', '-nosplash', '-r', 'setup, exit'], verbose=verbosity)
def build_matlab():
"""Builds MATLAB example in build/matlab/ but not the one in examples/."""
global release
amalgamate(core_files + ['code-experiments/src/coco_runtime_matlab.c'], 'code-experiments/build/matlab/coco.c',
release, {"COCO_VERSION": git_version(pep440=True)})
expand_file('code-experiments/src/coco.h', 'code-experiments/build/matlab/coco.h',
{'COCO_VERSION': git_version(pep440=True)})
write_file(git_revision(), "code-experiments/build/matlab/REVISION")
write_file(git_version(), "code-experiments/build/matlab/VERSION")
run('code-experiments/build/matlab', ['matlab', '-nodisplay', '-nosplash', '-r', 'setup, exit'], verbose=verbosity)
def run_matlab_sms():
""" Builds and runs the SMS-EMOA in MATLAB """
print('CLEAN\tmex files from code-experiments/examples/bbob-biobj-matlab-smsemoa/')
# remove the mex files for a clean compilation first
for filename in glob.glob('code-experiments/examples/bbob-biobj-matlab-smsemoa/*.mex*'):
os.remove(filename)
# amalgamate, copy, and build
build_matlab_sms()
wait_for_compilation_to_finish('./code-experiments/examples/bbob-biobj-matlab-smsemoa/paretofront')
# run after compilation finished
run('code-experiments/examples/bbob-biobj-matlab-smsemoa',
['matlab', '-nodisplay', '-nosplash', '-r', 'run_smsemoa_on_bbob_biobj, exit'], verbose=verbosity)
def run_python(test=True):
""" Builds and installs the Python module `cocoex` and runs the
`example_experiment.py` as a simple test case. """
build_python()
try:
if test:
run(os.path.join('code-experiments', 'build', 'python'),
['python', 'coco_test.py'])
run(os.path.join('code-experiments', 'build', 'python'),
['python', 'example_experiment.py'])
except subprocess.CalledProcessError:
sys.exit(-1)
def run_matlab():
""" Builds and runs the example experiment in build/matlab/ in MATLAB """
print('CLEAN\tmex files from code-experiments/build/matlab/')
# remove the mex files for a clean compilation first
for filename in glob.glob('code-experiments/build/matlab/*.mex*'):
os.remove(filename)
# amalgamate, copy, and build
build_matlab()
wait_for_compilation_to_finish('./code-experiments/build/matlab/cocoCall')
# run after compilation finished
run('code-experiments/build/matlab', ['matlab', '-nodisplay', '-nosplash', '-r', 'exampleexperiment, exit'],
verbose=verbosity)
def run_matlab_sms():
""" Builds and runs the SMS-EMOA in MATLAB """
print('CLEAN\tmex files from code-experiments/examples/bbob-biobj-matlab-smsemoa/')
# remove the mex files for a clean compilation first
for filename in glob.glob('code-experiments/examples/bbob-biobj-matlab-smsemoa/*.mex*'):
os.remove(filename)
# amalgamate, copy, and build
build_matlab_sms()
wait_for_compilation_to_finish('./code-experiments/examples/bbob-biobj-matlab-smsemoa/paretofront')
# run after compilation finished
run('code-experiments/examples/bbob-biobj-matlab-smsemoa',
['matlab', '-nodisplay', '-nosplash', '-r', 'run_smsemoa_on_bbob_biobj, exit'], verbose=verbosity)
def run_python(test=False):
""" Builds and installs the Python module `cocoex` and runs the
`example_experiment.py` as a simple test case. If `test` is True,
it runs, in addition, the tests in `coco_test.py`."""
build_python()
try:
if test:
run(os.path.join('code-experiments', 'build', 'python'), ['python', 'coco_test.py'])
python(os.path.join('code-experiments', 'build', 'python'),
['example_experiment.py'])
except subprocess.CalledProcessError:
sys.exit(-1)
def leak_check():
""" Performs a leak check in C """
build_c()
build_c_integration_tests()
os.environ['CFLAGS'] = '-g -Os'
valgrind_cmd = ['valgrind', '--error-exitcode=1', '--track-origins=yes',
'--leak-check=full', '--show-reachable=yes',
'./test_coco', 'bbob2009_testcases.txt']
run('code-experiments/test/integration-test', valgrind_cmd, verbose=verbosity)
valgrind_cmd = ['valgrind', '--error-exitcode=1', '--track-origins=yes',
'--leak-check=full', '--show-reachable=yes',
'./test_biobj', 'leak_check']
run('code-experiments/test/integration-test', valgrind_cmd, verbose=verbosity)
def _prep_python():
global release
amalgamate(core_files + ['code-experiments/src/coco_runtime_c.c'], 'code-experiments/build/python/cython/coco.c',
release)
copy_file('code-experiments/src/coco.h', 'code-experiments/build/python/cython/coco.h')
copy_file('code-experiments/src/best_values_hyp.txt', 'code-experiments/build/python/best_values_hyp.txt')
copy_file('code-experiments/src/bbob2009_testcases.txt', 'code-experiments/build/python/bbob2009_testcases.txt')
expand_file('code-experiments/build/python/README.in', 'code-experiments/build/python/README',
{'COCO_VERSION': git_version()}) # hg_version()})
expand_file('code-experiments/build/python/setup.py.in', 'code-experiments/build/python/setup.py',
{'COCO_VERSION': git_version()}) # hg_version()})
if 'darwin' in sys.platform:
run('code-experiments/build/python/cython', ['cython', 'interface.pyx'])
def build_matlab_sms():
"""Builds the SMS-EMOA in MATLAB """
global release
join = os.path.join
destination_folder = 'code-experiments/examples/bbob-biobj-matlab-smsemoa'
# amalgamate and copy files
amalgamate(core_files + ['code-experiments/src/coco_runtime_matlab.c'],
join(destination_folder, 'coco.c'), release)
copy_file('code-experiments/src/coco.h', join(destination_folder, 'coco.h'))
write_file(git_revision(), join(destination_folder, "REVISION"))
write_file(git_version(), join(destination_folder, "VERSION"))
copy_file('code-experiments/build/matlab/cocoCall.c', join(destination_folder, 'cocoCall.c'))
# compile
run(destination_folder, ['matlab', '-nodisplay', '-nosplash', '-r', 'setup, exit'])
def run_c_integration_tests():
""" Runs integration tests in C """
try:
run('code-experiments/test/integration-test',
['./test_coco', 'bbob2009_testcases.txt'], verbose=_verbosity)
run('code-experiments/test/integration-test',
['./test_coco', 'bbob2009_testcases2.txt'], verbose=_verbosity)
run('code-experiments/test/integration-test',
['./test_instance_extraction'], verbose=_verbosity)
run('code-experiments/test/integration-test',
['./test_biobj'], verbose=_verbosity)
run('code-experiments/test/integration-test',
['./test_bbob-constrained'], verbose=_verbosity)
except subprocess.CalledProcessError:
sys.exit(-1)
def build_octave():
"""Builds example in build/matlab/ with GNU Octave."""
global release
amalgamate(core_files + ['code-experiments/src/coco_runtime_c.c'],
'code-experiments/build/matlab/coco.c', release)
copy_file('code-experiments/src/coco.h', 'code-experiments/build/matlab/coco.h')
write_file(git_revision(), "code-experiments/build/matlab/REVISION")
write_file(git_version(), "code-experiments/build/matlab/VERSION")
# make sure that under Windows, run_octave has been run at least once
# before to provide the necessary octave_coco.bat file
if ('win32' in sys.platform):
run('code-experiments/build/matlab', ['octave_coco.bat', '--no-gui', 'setup.m'])
else:
run('code-experiments/build/matlab', ['octave', '--no-gui', 'setup.m'])
def run_c_integration_tests():
""" Runs integration tests in C """
try:
run('code-experiments/test/integration-test', ['./test_coco', 'bbob2009_testcases.txt'])
run('code-experiments/test/integration-test', ['./test_coco', 'bbob2009_testcases2.txt'])
run('code-experiments/test/integration-test', ['./test_instance_extraction'])
run('code-experiments/test/integration-test', ['./test_biobj'])
except subprocess.CalledProcessError:
sys.exit(-1)
def build_octave_sms():
"""Builds the SMS-EMOA in Octave """
global release
join = os.path.join
destination_folder = 'code-experiments/examples/bbob-biobj-matlab-smsemoa'
# amalgamate and copy files
amalgamate(core_files + ['code-experiments/src/coco_runtime_c.c'],
join(destination_folder, 'coco.c'), release)
copy_file('code-experiments/src/coco.h', join(destination_folder, 'coco.h'))
write_file(git_revision(), join(destination_folder, "REVISION"))
write_file(git_version(), join(destination_folder, "VERSION"))
copy_file('code-experiments/build/matlab/cocoCall.c', join(destination_folder, 'cocoCall.c'))
# compile
if ('win32' in sys.platform):
run(destination_folder, ['octave_coco.bat', '--no-gui', 'setup.m'])
else:
run(destination_folder, ['octave', '--no-gui', 'setup.m'])
def build_matlab_sms():
global release
join = os.path.join
source_folder = join('code-experiments', 'build', 'matlab')
destination_folder = join('code-experiments', 'examples',
'bbob-biobj-matlab-smsemoa')
# amalgamate and copy files
amalgamate(core_files + ['code-experiments/src/coco_runtime_c.c'],
join(destination_folder, 'coco.c'), release)
copy_file('code-experiments/src/coco.h', 'code-experiments/examples/bbob-biobj-matlab-smsemoa/coco.h')
write_file(git_revision(), join(destination_folder, "REVISION"))
write_file(git_version(), join(destination_folder, "VERSION"))
for file in matlab_octave_wrapper_files:
copy_file(join(source_folder, file),
join(destination_folder, file))
# compile
run('code-experiments/examples/bbob-biobj-matlab-smsemoa', ['matlab', '-nodisplay', '-nosplash', '-r', 'setup, exit'])
def build_matlab_sms():
"""Builds the SMS-EMOA in MATLAB """
global RELEASE
destination_folder = 'code-experiments/examples/bbob-biobj-matlab-smsemoa'
# amalgamate and copy files
amalgamate(CORE_FILES + ['code-experiments/src/coco_runtime_matlab.c'],
join(destination_folder, 'coco.c'), RELEASE,
{"COCO_VERSION": git_version(pep440=True)})
expand_file('code-experiments/src/coco.h', join(destination_folder, 'coco.h'),
{'COCO_VERSION': git_version(pep440=True)})
for f in MATLAB_FILES:
copy_file(join('code-experiments/build/matlab/', f), join(destination_folder, f))
write_file(git_revision(), join(destination_folder, "REVISION"))
write_file(git_version(), join(destination_folder, "VERSION"))
copy_file('code-experiments/build/matlab/cocoCall.c', join(destination_folder, 'cocoCall.c'))
# compile
run(destination_folder, ['matlab', '-nodisplay', '-nosplash', '-r', 'setup, exit'])
def build_octave():
"""Builds example in build/matlab/ with GNU Octave."""
global release
amalgamate(core_files + ['code-experiments/src/coco_runtime_c.c'],
'code-experiments/build/matlab/coco.c', release,
{"COCO_VERSION": git_version(pep440=True)})
expand_file('code-experiments/src/coco.h', 'code-experiments/build/matlab/coco.h',
{'COCO_VERSION': git_version(pep440=True)})
write_file(git_revision(), "code-experiments/build/matlab/REVISION")
write_file(git_version(), "code-experiments/build/matlab/VERSION")
# make sure that under Windows, run_octave has been run at least once
# before to provide the necessary octave_coco.bat file
if ('win32' in sys.platform):
run('code-experiments/build/matlab', ['octave_coco.bat', '--no-gui', 'setup.m'], verbose=verbosity)
else:
run('code-experiments/build/matlab', ['octave', '--no-gui', 'setup.m'], verbose=verbosity)
def build_octave_sms():
"""Builds the SMS-EMOA in Octave """
global RELEASE
destination_folder = 'code-experiments/examples/bbob-biobj-matlab-smsemoa'
# amalgamate and copy files
amalgamate(CORE_FILES + ['code-experiments/src/coco_runtime_c.c'],
join(destination_folder, 'coco.c'), RELEASE,
{"COCO_VERSION": git_version(pep440=True)})
expand_file('code-experiments/src/coco.h', join(destination_folder, 'coco.h'),
{'COCO_VERSION': git_version(pep440=True)})
for f in MATLAB_FILES:
copy_file(join('code-experiments/build/matlab/', f), join(destination_folder, f))
write_file(git_revision(), join(destination_folder, "REVISION"))
write_file(git_version(), join(destination_folder, "VERSION"))
copy_file('code-experiments/build/matlab/cocoCall.c', join(destination_folder, 'cocoCall.c'))
# compile
if 'win32' in sys.platform:
run(destination_folder, ['octave_coco.bat', '--no-gui', 'setup.m'])
else:
run(destination_folder, ['octave', '--no-gui', 'setup.m'])
def run_c_example_tests():
try:
run('code-experiments/test/example-test', ['./example_bbob2009'])
run('code-experiments/test/example-test', ['./example_biobj'])
run('code-experiments/test/example-test', ['./example_toy'])
except subprocess.CalledProcessError:
sys.exit(-1)
def uninstall_postprocessing():
run('.', ['pip', 'uninstall', 'cocopp', '-y'], verbose=_verbosity)
def build_java():
""" Builds the example experiment in Java """
global RELEASE
amalgamate(CORE_FILES + ['code-experiments/src/coco_runtime_c.c'],
'code-experiments/build/java/coco.c', RELEASE,
{"COCO_VERSION": git_version(pep440=True)})
expand_file('code-experiments/src/coco.h', 'code-experiments/build/java/coco.h',
{'COCO_VERSION': git_version(pep440=True)})
write_file(git_revision(), "code-experiments/build/java/REVISION")
write_file(git_version(), "code-experiments/build/java/VERSION")
run('code-experiments/build/java', ['javac', 'CocoJNI.java'], verbose=_verbosity)
run('code-experiments/build/java', ['javah', 'CocoJNI'], verbose=_verbosity)
# Finds the path to the headers jni.h and jni_md.h (platform-dependent)
# and compiles the CocoJNI library (compiler-dependent). So far, only
# the following cases are covered:
# 1. Windows with Cygwin (both 64-bit)
# Note that 'win32' stands for both Windows 32-bit and 64-bit.
# Since platform 'cygwin' does not work as expected, we need to look for it in the PATH.
if ('win32' in sys.platform) and ('cygwin' in os.environ['PATH']):
jdkpath = check_output(['where', 'javac'], stderr=STDOUT,
env=os.environ, universal_newlines=True)
jdkpath1 = jdkpath.split("bin")[0] + 'include'
jdkpath2 = jdkpath1 + '\\win32'
if '64' in platform.machine():
run('code-experiments/build/java', ['x86_64-w64-mingw32-gcc', '-I', jdkpath1, '-I',
jdkpath2, '-shared', '-o', 'CocoJNI.dll',
'CocoJNI.c'], verbose=_verbosity)
# 2. Windows with Cygwin (both 32-bit)
elif '32' in platform.machine() or 'x86' in platform.machine():
run('code-experiments/build/java', ['i686-w64-mingw32-gcc', '-Wl,--kill-at', '-I',
jdkpath1, '-I', jdkpath2, '-shared', '-o',
'CocoJNI.dll', 'CocoJNI.c'], verbose=_verbosity)
# 3. Windows without Cygwin
elif ('win32' in sys.platform) and ('cygwin' not in os.environ['PATH']):
jdkpath = check_output(['where', 'javac'], stderr=STDOUT,
env=os.environ, universal_newlines=True)
jdkpath1 = jdkpath.split("bin")[0] + 'include'
jdkpath2 = jdkpath1 + '\\win32'
run('code-experiments/build/java',
['gcc', '-Wl,--kill-at', '-I', jdkpath1, '-I', jdkpath2,
'-shared', '-o', 'CocoJNI.dll', 'CocoJNI.c'],
verbose=_verbosity)
# 4. Linux
elif 'linux' in sys.platform:
jdkpath = check_output(['locate', 'jni.h'], stderr=STDOUT,
env=os.environ, universal_newlines=True)
jdkpath1 = jdkpath.split("jni.h")[0]
jdkpath2 = jdkpath1 + '/linux'
run('code-experiments/build/java',
['gcc', '-I', jdkpath1, '-I', jdkpath2, '-c', 'CocoJNI.c'],
verbose=_verbosity)
run('code-experiments/build/java',
['gcc', '-I', jdkpath1, '-I', jdkpath2, '-o',
'libCocoJNI.so', '-fPIC', '-shared', 'CocoJNI.c'],
verbose=_verbosity)
# 5. Mac
elif 'darwin' in sys.platform:
jdkversion = check_output(['javac', '-version'], stderr=STDOUT,
env=os.environ, universal_newlines=True)
jdkversion = jdkversion.split()[1]
jdkpath = '/System/Library/Frameworks/JavaVM.framework/Headers'
jdkpath1 = ('/Library/Java/JavaVirtualMachines/jdk' +
jdkversion + '.jdk/Contents/Home/include')
jdkpath2 = jdkpath1 + '/darwin'
run('code-experiments/build/java',
['gcc', '-I', jdkpath, '-I', jdkpath1, '-I', jdkpath2, '-c', 'CocoJNI.c'],
verbose=_verbosity)
run('code-experiments/build/java',
['gcc', '-dynamiclib', '-o', 'libCocoJNI.jnilib', 'CocoJNI.o'],
verbose=_verbosity)
run('code-experiments/build/java', ['javac', 'Problem.java'], verbose=_verbosity)
run('code-experiments/build/java', ['javac', 'Benchmark.java'], verbose=_verbosity)
run('code-experiments/build/java', ['javac', 'Observer.java'], verbose=_verbosity)
run('code-experiments/build/java', ['javac', 'Suite.java'], verbose=_verbosity)
run('code-experiments/build/java', ['javac', 'ExampleExperiment.java'], verbose=_verbosity)
