def __init__(self):
'''
Constructor
'''
dataBaseName = configParser.get("Database", "name")
dataBaseUri = configParser.get("Database", "uri")
instrumentName = configParser.get("General", "instrument_name")
self.db = globals()[dataBaseName](dataBaseUri,instrumentName)
def __init__(self):
'''
Constructor
@param launcherNameToUse : Parameters of the launcher
'''
classLauncher = globals()[configParser.get("Launcher", "name")]
executable = configParser.get("Launcher", "executable")
if executable is not None and len(executable.strip())>0:
classLauncherInitParams = ast.literal_eval(executable)
self.launcher = classLauncher(classLauncherInitParams)
else:
self.launcher = classLauncher()
def _buildInputParams(self):
'''
Necessary input params for Lamp and Mantid
Some redundancy is introduced as scripts read different formats
'''
params = {}
params["instrument"] = configParser.get("General", "instrument_name")
if self.validator.jsonContent.has_key("params") :
queryParams = self.validator.jsonContent["params"]
if queryParams.has_key("numors"): # list of numors:
listOfNumorsText = queryParams["numors"]
# TODO : We have to handle this for numor ranges
listOfNumors = listOfNumorsText.split(',')
db = storage.getDBConnection()
listOfFiles = db.getListOfFiles(listOfNumors)
if len(listOfFiles) <= 0:
raise Exception("The numors %s don't exist in the DB"%listOfNumors)
elif len(listOfFiles) > 1:
params["data_files_full_path"]=listOfFiles
params["data_files"] = []
for i in listOfFiles:
b = os.path.basename(i)
params["data_files"].append(b)
else:
params["data_file_full_path"]=listOfFiles[0]
params["data_file"] = os.path.basename(listOfFiles[0])
# Assuming all files in the same folder
params["working_path"] = os.path.dirname(listOfFiles[0])
logger.debug(pprint.pformat(params))
return params
def __init__(self,databaseNamePrefix='reduction'):
'''
Constructor
'''
self.client = MongoClient() # localhost
databasename = databaseNamePrefix + configParser.get("General", "instrument_name")
self.db = self.client[databasename]
logger.debug("Using database: %s."%databasename)
def setUp(self):
# For the tests to pass
self.instrumentNameOriginal = configParser.get("General", "instrument_name")
configParser.set("General", "instrument_name", self.instrumentName)
import config.config
from config.config import configParser
import sys
sys.path.append(configParser.get('Mantid','bin_folder'))
from mantid.simpleapi import *
### Usefull functions
def workspaceToDic(ws):
res = {}
# res["type"] = "1d"
#
# res["y_axis"] = ws.extractY().shape[1]
# res["y_axis_data"] = ws.extractY()[0]
#
# res["x_axis_size"] = ws.extractX().shape[1]
# res["x_axis_data"] = ws.extractX()[0]
#
# xAxis = ws.getAxis(0)
# xAxisUnit = xAxis.getUnit()
# res["x_axis_label"] = xAxisUnit.name()
# res["x_axis_unit"] = xAxisUnit.label()
#
# yAxis = ws.getAxis(1)
# yAxisUnit = yAxis.getUnit()
# res["y_axis_label"] = yAxisUnit.name()
# res["y_axis_unit"] = yAxisUnit.label()
def __init__(self):
'''
Constructor
'''
functionsFilename = configParser.get("General", "functions_specs_file")
self._functionsDic = self._importJsonFromFile(functionsFilename)
def __init__(self):
'''
Constructor
'''
self._functionsFilename = configParser.get("General", "functions_specs_file")
self._instrumentName = configParser.get("General", "instrument_name")