def __init__(self):
self.current_generation_ = 0
self.best_scores_per_runs_ = [] # used by tests
total_registers = (Config.RESTRICTIONS['genotype_options']['output_registers']
+ Config.USER['advanced_training_parameters']['extra_registers'])
Config.RESTRICTIONS['genotype_options']['total_registers'] = total_registers
self._initialize_seeds()
self.environment_ = self._initialize_environment()
self.selection_ = Selection(self.environment_)
self.run_infos_ = []
def run(self):
print "\n### Starting pSBB"
# initialize the environment and the selection algorithm
self.environment = self._initialize_environment()
self.selection = Selection(self.environment)
overall_info = ""
overall_info += "\n### CONFIG: "+str(Config.USER)+"\n"
overall_info += "\n### RESTRICTIONS: "+str(Config.RESTRICTIONS)+"\n"
overall_info += self.environment.metrics()
overall_info += "\nSeeds per run: "+str(self.seeds_per_run_)
overall_info += "\nDiversities: "+str(Config.RESTRICTIONS['used_diversities'])
print overall_info
run_infos = []
for run_id in range(Config.USER['training_parameters']['runs_total']):
start_time = time.time()
run_info = RunInfo(run_id+1, self.seeds_per_run_[run_id])
print "\nStarting run: "+str(run_info.run_id)
self._set_seed(run_info.seed)
# randomly initialize populations
self.current_generation_ = 0
teams_population, programs_population = self._initialize_populations()
self.environment.reset()
while not self._stop_criterion():
self.current_generation_ += 1
if self.current_generation_ == 1 or self.current_generation_ % Config.USER['training_parameters']['validate_after_each_generation'] == 0:
validation = True
else:
validation = False
# selection
teams_population, programs_population, pareto_front = self.selection.run(self.current_generation_, teams_population, programs_population, validation)
# final pruning
if self._stop_criterion():
older_teams = [team for team in teams_population if team.generation != self.current_generation_]
for team in older_teams:
team.prune_total()
# validation
if not validation:
print ".",
sys.stdout.flush()
self._store_per_generation_metrics(run_info, teams_population)
else:
best_team = self.environment.validate(self.current_generation_, teams_population)
self._store_per_generation_metrics(run_info, teams_population)
self._print_and_store_per_validation_metrics(run_info, best_team, teams_population, programs_population)
self._store_per_run_metrics(run_info, best_team, teams_population, pareto_front)
run_info.elapsed_time = round_value((time.time() - start_time)/60.0)
print("\nFinished run "+str(run_info.run_id)+", elapsed time: "+str(run_info.elapsed_time)+" mins")
run_infos.append(run_info)
sys.stdout.flush()
# finalize execution (get final metrics, print to output, print to file)
overall_info += self._generate_overall_metrics_output(run_infos)
print overall_info
sys.stdout.flush()
if Config.RESTRICTIONS['write_output_files']:
self.filepath_ = self._create_folder()
self._write_output_files(run_infos, overall_info)
self._save_teams_data_per_generation(run_infos)
class SBB:
"""
The main algorithm of SBB.
"""
def __init__(self):
self.current_generation_ = 0
self.best_scores_per_runs_ = [] # used by tests
if isinstance(Config.USER['advanced_training_parameters']['seed'], list):
self.seeds_per_run_ = Config.USER['advanced_training_parameters']['seed']
else:
if not Config.USER['advanced_training_parameters']['seed']:
Config.USER['advanced_training_parameters']['seed'] = random.randint(0, Config.RESTRICTIONS['max_seed'])
random.seed(Config.USER['advanced_training_parameters']['seed'])
self.seeds_per_run_ = []
for index in range(Config.USER['training_parameters']['runs_total']):
self.seeds_per_run_.append(random.randint(0, Config.RESTRICTIONS['max_seed']))
Config.RESTRICTIONS['used_diversities'] = list(set(Config.USER['advanced_training_parameters']['diversity']['use_and_show'] + Config.USER['advanced_training_parameters']['diversity']['only_show']))
Config.RESTRICTIONS['genotype_options']['total_registers'] = Config.RESTRICTIONS['genotype_options']['output_registers'] + Config.USER['advanced_training_parameters']['extra_registers']
def run(self):
print "\n### Starting pSBB"
# initialize the environment and the selection algorithm
self.environment = self._initialize_environment()
self.selection = Selection(self.environment)
overall_info = ""
overall_info += "\n### CONFIG: "+str(Config.USER)+"\n"
overall_info += "\n### RESTRICTIONS: "+str(Config.RESTRICTIONS)+"\n"
overall_info += self.environment.metrics()
overall_info += "\nSeeds per run: "+str(self.seeds_per_run_)
overall_info += "\nDiversities: "+str(Config.RESTRICTIONS['used_diversities'])
print overall_info
run_infos = []
for run_id in range(Config.USER['training_parameters']['runs_total']):
start_time = time.time()
run_info = RunInfo(run_id+1, self.seeds_per_run_[run_id])
print "\nStarting run: "+str(run_info.run_id)
self._set_seed(run_info.seed)
# randomly initialize populations
self.current_generation_ = 0
teams_population, programs_population = self._initialize_populations()
self.environment.reset()
while not self._stop_criterion():
self.current_generation_ += 1
if self.current_generation_ == 1 or self.current_generation_ % Config.USER['training_parameters']['validate_after_each_generation'] == 0:
validation = True
else:
validation = False
# selection
teams_population, programs_population, pareto_front = self.selection.run(self.current_generation_, teams_population, programs_population, validation)
# final pruning
if self._stop_criterion():
older_teams = [team for team in teams_population if team.generation != self.current_generation_]
for team in older_teams:
team.prune_total()
# validation
if not validation:
print ".",
sys.stdout.flush()
self._store_per_generation_metrics(run_info, teams_population)
else:
best_team = self.environment.validate(self.current_generation_, teams_population)
self._store_per_generation_metrics(run_info, teams_population)
self._print_and_store_per_validation_metrics(run_info, best_team, teams_population, programs_population)
self._store_per_run_metrics(run_info, best_team, teams_population, pareto_front)
run_info.elapsed_time = round_value((time.time() - start_time)/60.0)
print("\nFinished run "+str(run_info.run_id)+", elapsed time: "+str(run_info.elapsed_time)+" mins")
run_infos.append(run_info)
sys.stdout.flush()
# finalize execution (get final metrics, print to output, print to file)
overall_info += self._generate_overall_metrics_output(run_infos)
print overall_info
sys.stdout.flush()
if Config.RESTRICTIONS['write_output_files']:
self.filepath_ = self._create_folder()
self._write_output_files(run_infos, overall_info)
self._save_teams_data_per_generation(run_infos)
def _initialize_environment(self):
return ClassificationEnvironment()
def _set_seed(self, seed):
random.seed(seed)
numpy.random.seed(seed)
def _create_folder(self):
if not os.path.exists("outputs/"):
os.makedirs("outputs/")
localtime = time.localtime()
pretty_localtime = str(localtime.tm_year)+"-"+str(localtime.tm_mon)+"-"+str(localtime.tm_mday)+"-"+str(localtime.tm_hour)+str(localtime.tm_min)+str(localtime.tm_sec)
filename = Config.USER['dataset']
filepath = "outputs/"+str(filename)+"_"+pretty_localtime+"/"
os.makedirs(filepath)
return filepath
def _initialize_populations(self):
"""
Initialize a population of teams with ['team_size']['min'] unique random programs with distinct actions.
Then randomly add already created programs to the teams.
"""
if Config.USER['training_parameters']['team_size']['min'] > Config.RESTRICTIONS['total_actions']:
raise ValueError("The team minimum size is lower than the total number of actions, it is not possible to initialize a distinct set of actions per team!")
# randomly initialize teams with the minimum size
reset_teams_ids()
reset_programs_ids()
teams_population = []
programs_population = []
for t in range(Config.USER['training_parameters']['populations']['teams']):
available_actions = range(Config.RESTRICTIONS['total_actions'])
programs = []
for index in range(Config.USER['training_parameters']['team_size']['min']):
program = self._initialize_random_program(available_actions)
available_actions.remove(program.action)
programs.append(program)
team = Team(self.current_generation_, programs)
teams_population.append(team)
programs_population += programs
# randomly add more already created programs to the teams
if Config.USER['advanced_training_parameters']['run_initialization_step2']:
programs_range = Config.USER['training_parameters']['team_size']['max'] - Config.USER['training_parameters']['team_size']['min']
for team in teams_population:
programs_to_add = random.randrange(0, programs_range+1)
for index in range(programs_to_add):
candidates = []
for count in range(5):
program = random.choice(programs_population)
if program not in team.programs:
candidates.append(program)
references = [len(p.teams_) for p in candidates]
selected_program = candidates[references.index(max(references))]
team._add_program(selected_program)
return teams_population, programs_population
def _initialize_random_program(self, available_actions):
instructions = []
total_instructions = random.randrange(Config.USER['training_parameters']['program_size']['min'], Config.USER['training_parameters']['program_size']['max']+1)
for i in range(total_instructions):
instructions.append(Instruction())
action = random.choice(available_actions)
program = Program(self.current_generation_, instructions, action)
return program
def _stop_criterion(self):
if self.current_generation_ == Config.USER['training_parameters']['generations_total']:
return True
return False
def _print_and_store_per_validation_metrics(self, run_info, best_team, teams_population, programs_population):
print "\n\n>>>>> Generation: "+str(self.current_generation_)+", run: "+str(run_info.run_id)
run_info.train_score_per_validation.append(best_team.fitness_)
run_info.test_score_per_validation.append(best_team.score_testset_)
run_info.recall_per_validation.append(best_team.extra_metrics_['recall_per_action'])
print("\n### Best Team Metrics: "+best_team.metrics()+"\n")
older_teams = [team for team in teams_population if team.generation != self.current_generation_]
fitness_score_mean = round_value(numpy.mean([team.fitness_ for team in older_teams]))
validation_score_mean = round_value(numpy.mean([team.score_testset_ for team in older_teams]))
run_info.global_mean_validation_score_per_validation.append(validation_score_mean)
print
for key in best_team.diversity_:
run_info.global_diversity_per_validation[key].append(run_info.global_diversity_per_generation[key][-1])
print str(key)+": "+str(best_team.diversity_[key])+" (global: "+str(run_info.global_diversity_per_generation[key][-1])+")"
print "\n### Global Metrics:"
run_info.global_mean_fitness_score_per_validation.append(fitness_score_mean)
run_info.global_max_fitness_score_per_validation.append(round_value(max([team.fitness_ for team in older_teams])))
print "\nfitness (global): "+str(fitness_score_mean)
actions_distribution = Counter([p.action for p in programs_population])
print "\nactions distribution: "+str(actions_distribution)
actions_distribution_array = []
for action in range(Config.RESTRICTIONS['total_actions']):
if action in actions_distribution:
actions_distribution_array.append(actions_distribution[action])
else:
actions_distribution_array.append(0)
run_info.actions_distribution_per_validation.append(actions_distribution_array)
inputs_distribution_per_instruction = Counter()
inputs_distribution_per_team = Counter()
for team in older_teams:
inputs_distribution_per_instruction.update(team.inputs_distribution())
inputs_distribution_per_team.update(list(team.inputs_distribution()))
inputs_distribution_per_instruction_array = []
inputs_distribution_per_team_array = []
for value in range(Config.RESTRICTIONS['total_inputs']):
if value in inputs_distribution_per_instruction:
inputs_distribution_per_instruction_array.append(inputs_distribution_per_instruction[value])
else:
inputs_distribution_per_instruction_array.append(0)
if value in inputs_distribution_per_team:
inputs_distribution_per_team_array.append(inputs_distribution_per_team[value])
else:
inputs_distribution_per_team_array.append(0)
print "inputs distribution (global, per instruction): "+str(inputs_distribution_per_instruction_array)
print "inputs distribution (global, per team): "+str(inputs_distribution_per_team_array)
run_info.inputs_distribution_per_instruction_per_validation.append(inputs_distribution_per_instruction_array)
run_info.inputs_distribution_per_team_per_validation.append(inputs_distribution_per_team_array)
print
print "Global Fitness (last 10 gen.): "+str(run_info.global_mean_fitness_per_generation[-10:])
if len(Config.RESTRICTIONS['used_diversities']) > 0:
print "Global Diversity (last 10 gen.):"
for diversity in Config.RESTRICTIONS['used_diversities']:
print "- "+str(diversity)+": "+str(run_info.global_diversity_per_generation[diversity][-10:])
if len(Config.RESTRICTIONS['used_diversities']) > 1:
print "Diversity Type (last 10 gen.): "+str(run_info.novelty_type_per_generation[-10:])
avg_team_size = round_value(numpy.mean([len(team.programs) for team in older_teams]))
avg_program_with_intros_size = round_value(numpy.mean(flatten([[len(program.instructions) for program in team.programs] for team in older_teams])))
avg_program_without_intros_size = round_value(numpy.mean(flatten([[len(program.instructions_without_introns_) for program in team.programs] for team in older_teams])))
run_info.mean_team_size_per_validation.append(avg_team_size)
run_info.mean_program_size_with_introns_per_validation.append(avg_program_with_intros_size)
run_info.mean_program_size_without_introns_per_validation.append(avg_program_without_intros_size)
print "\nMean Team Sizes: "+str(run_info.mean_team_size_per_validation[-10:])
print "Mean Program Sizes (with introns): "+str(run_info.mean_program_size_with_introns_per_validation[-10:])
print "Mean Program Sizes (without introns): "+str(run_info.mean_program_size_without_introns_per_validation[-10:])
print "\n<<<<< Generation: "+str(self.current_generation_)+", run: "+str(run_info.run_id)
def _store_per_generation_metrics(self, run_info, teams_population):
older_teams = [team for team in teams_population if team.generation != self.current_generation_]
generation_info = []
for team in older_teams:
team_info = []
team_info.append(round_value(team.fitness_, round_decimals_to = 3))
team_info.append(round_value(team.score_testset_, round_decimals_to = 3))
for diversity in Config.RESTRICTIONS['used_diversities']:
if diversity in team.diversity_:
value = round_value(team.diversity_[diversity], round_decimals_to = 3)
else:
value = 0.0
team_info.append(value)
generation_info.append(team_info)
run_info.info_per_team_per_generation.append(generation_info)
mean_fitness = round_value(numpy.mean([team.fitness_ for team in older_teams]), 3)
run_info.global_mean_fitness_per_generation.append(mean_fitness)
run_info.global_max_fitness_per_generation.append(round_value(max([team.fitness_ for team in older_teams])))
for diversity in Config.RESTRICTIONS['used_diversities']:
run_info.global_diversity_per_generation[diversity].append(round_value(numpy.mean([t.diversity_[diversity] for t in older_teams]), 3))
if len(Config.RESTRICTIONS['used_diversities']) > 1 and self.selection.previous_diversity_:
run_info.global_fitness_per_diversity_per_generation[self.selection.previous_diversity_].append(mean_fitness)
run_info.novelty_type_per_generation.append(Config.RESTRICTIONS['used_diversities'].index(self.selection.previous_diversity_))
def _store_per_run_metrics(self, run_info, best_team, teams_population, pareto_front):
run_info.best_team = best_team
for team in teams_population:
if team.generation != self.current_generation_:
run_info.teams_in_last_generation.append(team)
run_info.pareto_front_in_last_generation = pareto_front
def _generate_overall_metrics_output(self, run_infos):
msg = "\n\n\n#################### OVERALL RESULTS ####################"
msg += "\n\n\n##### BEST TEAM METRICS"
score_per_run = []
for run in run_infos:
score_per_run.append(round_value(run.best_team.score_testset_))
self.best_scores_per_runs_ = score_per_run
msg += "\n\nBest Team Validation Score per Run: "+str(score_per_run)
msg += "\nmean: "+str(round_value(numpy.mean(score_per_run)))
msg += "\nstd. deviation: "+str(round_value(numpy.std(score_per_run)))
scores = [run.best_team.score_testset_ for run in run_infos]
best_run = run_infos[scores.index(max(scores))]
msg += "\nbest run: "+str(best_run.run_id)
score_means, score_stds = self._process_scores([run.train_score_per_validation for run in run_infos])
msg += "\n\nBest Team Train Score per Validation across Runs:"
msg += "\nmean: "+str(score_means)
msg += "\nstd. deviation: "+str(score_stds)
score_means, score_stds = self._process_scores([run.test_score_per_validation for run in run_infos])
msg += "\n\nBest Team Validation Score per Validation across Runs:"
msg += "\nmean: "+str(score_means)
msg += "\nstd. deviation: "+str(score_stds)
msg += "\n\n\n##### GLOBAL METRICS"
final_scores = [run.global_mean_validation_score_per_validation[-1] for run in run_infos]
msg += "\n\nGlobal Validation Score per Run: "+str(final_scores)
msg += "\nmean: "+str(round_value(numpy.mean(final_scores)))
msg += "\nstd. deviation: "+str(round_value(numpy.std(final_scores)))
best_run = run_infos[final_scores.index(max(final_scores))]
msg += "\nbest run: "+str(best_run.run_id)
score_means, score_stds = self._process_scores([run.global_mean_fitness_score_per_validation for run in run_infos])
msg += "\n\nGlobal Train Score per Validation across Runs:"
msg += "\nmean: "+str(score_means)
msg += "\nstd. deviation: "+str(score_stds)
score_means, score_stds = self._process_scores([run.global_mean_validation_score_per_validation for run in run_infos])
msg += "\n\nGlobal Validation Score per Validation across Runs:"
msg += "\nmean: "+str(score_means)
msg += "\nstd. deviation: "+str(score_stds)
for key in Config.RESTRICTIONS['used_diversities']:
score_means, score_stds = self._process_scores([run.global_diversity_per_validation[key] for run in run_infos])
msg += "\n\nMean Diversity per Validation across Runs ("+str(key)+"):"
msg += "\nmean: "+str(score_means)
msg += "\nstd. deviation: "+str(score_stds)
elapseds_per_run = [run.elapsed_time for run in run_infos]
msg += "\n\nFinished execution, total elapsed time: "+str(round_value(sum(elapseds_per_run)))+" mins "
msg += "(mean: "+str(round_value(numpy.mean(elapseds_per_run)))+", std: "+str(round_value(numpy.std(elapseds_per_run)))+")"
return msg
def _process_scores(self, score_per_generation_per_run):
score_means = []
score_stds = []
for index in range(len(score_per_generation_per_run[0])):
column = [row[index] for row in score_per_generation_per_run]
score_means.append(round_value(numpy.mean(column)))
score_stds.append(round_value(numpy.std(column)))
return score_means, score_stds
def _write_output_files(self, run_infos, overall_info):
with open(self.filepath_+"metrics_overall.txt", "w") as text_file:
text_file.write(overall_info)
for run in run_infos:
path = self.filepath_+"run"+str(run.run_id)+"/"
os.makedirs(path)
with open(path+"metrics.txt", "w") as text_file:
text_file.write(str(run))
with open(path+"best_team.txt", "w") as text_file:
text_file.write(str(run.best_team))
with open(path+"best_team.json", "w") as text_file:
text_file.write(run.best_team.json())
self._save_teams(run.teams_in_last_generation, path+"last_generation_teams/")
self._save_teams(run.pareto_front_in_last_generation, path+"pareto_front/")
print "\n### Files saved at "+self.filepath_+"\n"
def _save_teams_data_per_generation(self, run_infos):
for run_info in run_infos:
path = self.filepath_+"run"+str(run_info.run_id)+"/metrics_per_generation/"
os.makedirs(path)
for generation_index, generation_info in enumerate(run_info.info_per_team_per_generation):
filename = str(generation_index+1)+".gen"
with open(path+filename, "w") as text_file:
for team_info in generation_info:
text_file.write(" ".join([str(info) for info in team_info])+"\n")
def _save_teams(self, teams, path):
if len(teams) > 0:
os.makedirs(path)
json_path = path+"json/"
os.makedirs(json_path)
for team in teams:
with open(path+team.__repr__()+".txt", "w") as text_file:
text_file.write(str(team))
with open(json_path+team.__repr__()+".json", "w") as text_file:
text_file.write(team.json())
class SBB:
"""
The main algorithm of SBB:
1. initialize the environment
2. for each run
1. initialize the populations
2. while current_generation < final_generation
1. selection
1. evaluate
2. keep the best teams / remove the others
3. generate children via mutation
"""
def __init__(self):
self.current_generation_ = 0
self.best_scores_per_runs_ = [] # used by tests
total_registers = (Config.RESTRICTIONS['genotype_options']['output_registers']
+ Config.USER['advanced_training_parameters']['extra_registers'])
Config.RESTRICTIONS['genotype_options']['total_registers'] = total_registers
self._initialize_seeds()
self.environment_ = self._initialize_environment()
self.selection_ = Selection(self.environment_)
self.run_infos_ = []
def _initialize_seeds(self):
if isinstance(Config.USER['advanced_training_parameters']['seed'], list):
self.seeds_per_run_ = Config.USER['advanced_training_parameters']['seed']
else:
if not Config.USER['advanced_training_parameters']['seed']:
Config.USER['advanced_training_parameters']['seed'] = random.randint(0,
Config.RESTRICTIONS['max_seed'])
random.seed(Config.USER['advanced_training_parameters']['seed'])
self.seeds_per_run_ = []
for index in range(Config.USER['training_parameters']['runs_total']):
self.seeds_per_run_.append(random.randint(0, Config.RESTRICTIONS['max_seed']))
def run(self):
print "\n### Starting pSBB"
initial_info = self._generate_initial_message_output()
print initial_info
for run_id in range(Config.USER['training_parameters']['runs_total']):
run_info = RunInfo(run_id+1, self.environment_, self.seeds_per_run_[run_id])
print "\nStarting run: "+str(run_info.run_id)
self._set_seed(run_info.seed)
if Config.USER['advanced_training_parameters']['second_layer']['enabled']:
self._initialize_actions(run_info)
self.current_generation_ = 0
teams_population, programs_population = self._initialize_populations()
self.environment_.reset()
while not self._stop_criterion():
self.current_generation_ += 1
validation = False
if self._is_validation():
validation = True
teams_population, programs_population, pareto_front = self.selection_.run(
self.current_generation_, teams_population, programs_population)
if self._stop_criterion():
older_teams = [team for team in teams_population if team.generation != self.current_generation_]
for team in older_teams:
team.prune_total()
self.environment_.metrics_.store_per_generation_metrics(run_info, teams_population,
self.current_generation_, self.selection_.previous_diversity_)
if not validation:
print ".",
sys.stdout.flush()
else:
best_team = self.environment_.validate(self.current_generation_, teams_population)
self.environment_.metrics_.store_per_validation_metrics(run_info, best_team,
teams_population, programs_population, self.current_generation_)
print "\n\n>>>>> Generation: "+str(self.current_generation_)+", run: "+str(run_info.run_id)
self.environment_.metrics_.print_per_validation_metrics(run_info, best_team)
print "\n<<<<< Generation: "+str(self.current_generation_)+", run: "+str(run_info.run_id)
self.environment_.metrics_.store_per_run_metrics(run_info, best_team, teams_population, pareto_front,
self.current_generation_)
run_info.end()
print("\nFinished run "+str(run_info.run_id)+", elapsed time: "+str(run_info.elapsed_time_)+" mins")
self.run_infos_.append(run_info)
sys.stdout.flush()
# finalize execution (get final metrics, print to output, print to file)
msg = self.environment_.metrics_.generate_overall_metrics_output(self.run_infos_)
elapseds_per_run = [run.elapsed_time_ for run in self.run_infos_]
msg += "\n\nFinished execution, total elapsed time: "+str(round_value(sum(elapseds_per_run)))+" mins "
msg += "(mean: "+str(round_value(numpy.mean(elapseds_per_run)))+", std: "+str(round_value(numpy.std(elapseds_per_run)))+")"
initial_info += msg
self.best_scores_per_runs_ = [round_value(run.best_team_.score_champion_) for run in self.run_infos_]
print initial_info
sys.stdout.flush()
if Config.RESTRICTIONS['write_output_files']:
self._write_output_files(initial_info)
def _initialize_environment(self):
environment = None
if Config.USER['task'] == 'classification':
environment = ClassificationEnvironment()
if Config.USER['task'] == 'reinforcement':
if Config.USER['reinforcement_parameters']['environment'] == 'tictactoe':
environment = TictactoeEnvironment()
if Config.USER['reinforcement_parameters']['environment'] == 'poker':
environment = PokerEnvironment()
if Config.USER['reinforcement_parameters']['environment'] == 'sockets':
environment = ReinforcementEnvironmentWithSockets()
if environment is None:
raise ValueError("No environment exists for "+str(Config.USER['task']))
return environment
def _generate_initial_message_output(self):
initial_info = ""
initial_info += "\n### CONFIG: "+str(Config.USER)+"\n"
initial_info += "\n### RESTRICTIONS: "+str(Config.RESTRICTIONS)+"\n"
initial_info += self.environment_.metrics_.quick_metrics()
initial_info += "\nSeeds per run: "+str(self.seeds_per_run_)
initial_info += "\nDiversities: "+str(Config.USER['advanced_training_parameters']['diversity']['metrics'])
return initial_info
def _set_seed(self, seed):
random.seed(seed)
numpy.random.seed(seed)
def _initialize_actions(self, run_info):
path = str(Config.USER['advanced_training_parameters']['second_layer']['path']).replace("[run_id]",
str(run_info.run_id))
if not os.path.exists(path):
raise ValueError("Path for second layer actions doesn't exist: "+str(path))
initialize_actions_for_second_layer(path, self.environment_)
total_team_actions = len(Config.RESTRICTIONS['second_layer']['action_mapping'])
Config.RESTRICTIONS['total_actions'] = total_team_actions
def _initialize_populations(self):
"""
Initialize a population of teams with ['team_size']['min'] unique random programs with distinct actions.
Then randomly add already created programs to the teams.
"""
if Config.USER['training_parameters']['team_size']['min'] > Config.RESTRICTIONS['total_actions']:
raise ValueError("The team minimum size is lower than the total number of actions, "
"it is not possible to initialize a distinct set of actions per team!")
reset_teams_ids()
reset_programs_ids()
teams_population = []
programs_population = []
for t in range(Config.USER['training_parameters']['populations']['teams']):
available_actions = range(Config.RESTRICTIONS['total_actions'])
programs = []
for index in range(Config.USER['training_parameters']['team_size']['min']):
program = self._initialize_random_program(available_actions)
available_actions.remove(program.action)
programs.append(program)
team = Team(self.current_generation_, programs, self.environment_)
teams_population.append(team)
programs_population += programs
return teams_population, programs_population
def _initialize_random_program(self, available_actions):
instructions = []
total_instructions = random.randrange(Config.USER['training_parameters']['program_size']['min'],
Config.USER['training_parameters']['program_size']['max']+1)
for i in range(total_instructions):
instructions.append(Instruction())
action = random.choice(available_actions)
program = Program(self.current_generation_, instructions, action)
return program
def _stop_criterion(self):
if self.current_generation_ == Config.USER['training_parameters']['generations_total']:
return True
return False
def _is_validation(self):
if self.current_generation_ == 1:
return True
mult = self.current_generation_ % Config.USER['training_parameters']['validate_after_each_generation']
if mult == 0:
return True
return False
def _write_output_files(self, initial_info):
self.filepath_ = self._create_folder()
with open(self.filepath_+"metrics_overall.txt", "w") as text_file:
text_file.write(initial_info)
for run in self.run_infos_:
path = self.filepath_+"run"+str(run.run_id)+"/"
os.makedirs(path)
with open(path+"metrics.txt", "w") as text_file:
text_file.write(str(run))
with open(path+"best_team.txt", "w") as text_file:
text_file.write(str(run.best_team_))
with open(path+"best_team.json", "w") as text_file:
text_file.write(run.best_team_.json())
self._save_teams(run.teams_in_last_generation_, path+"last_generation_teams/")
self._save_teams(run.pareto_front_in_last_generation_, path+"last_pareto_front/")
self._save_teams(run.hall_of_fame_in_last_generation_, path+"last_hall_of_fame/")
os.makedirs(path+"second_layer_files/")
for key in run.second_layer_files_.keys():
self._save_teams_in_actions_file(run.second_layer_files_[key], path+"second_layer_files/"+key+"_")
print "\n### Files saved at "+self.filepath_+"\n"
def _create_folder(self):
if not os.path.exists(Config.RESTRICTIONS['output_folder']):
os.makedirs(Config.RESTRICTIONS['output_folder'])
localtime = time.localtime()
hours = "%02d%02d%02d" % (localtime.tm_hour,localtime.tm_min,localtime.tm_sec,)
pretty_localtime = str(localtime.tm_year)+"-"+str(localtime.tm_mon)+"-"+str(localtime.tm_mday)+"-"+hours
if Config.USER['task'] == 'classification':
filename = Config.USER['classification_parameters']['dataset']
else:
filename = Config.USER['reinforcement_parameters']['environment']
filepath = Config.RESTRICTIONS['output_folder']+str(filename)+"_"+pretty_localtime+"/"
os.makedirs(filepath)
return filepath
def _save_teams(self, teams, path):
if len(teams) > 0:
os.makedirs(path)
json_path = path+"json/"
os.makedirs(json_path)
for team in teams:
with open(path+team.__repr__()+".txt", "w") as text_file:
text_file.write(str(team))
with open(json_path+team.__repr__()+".json", "w") as text_file:
text_file.write(team.json())
def _save_teams_in_actions_file(self, teams, path):
if len(teams) > 0:
actions = {}
for index, team in enumerate(teams):
actions[index] = team.dict()
with open(path+"actions.json", "w") as text_file:
text_file.write(json.dumps(actions))
