def __init__(self, seqParams, exprtParams):
#connect and define servers we'll be using
self.cxn = labrad.connect()
self.cxnlab = labrad.connect(
'192.168.169.49') #connection to labwide network
self.dv = self.cxn.data_vault
self.rf = self.cxn.trap_drive
self.pulser = self.cxn.pulser
self.pmt = self.cxn.normalpmtflow
self.seqP = Bunch(**seqParams)
self.expP = Bunch(**exprtParams)
self.xtal = Crystallizer(self.pulser, self.pmt, self.rf)
self.Binner = None
def __init__(self, seqParams, exprtParams):
#connect and define servers we'll be using
self.cxn = labrad.connect()
self.cxnlab = labrad.connect('192.168.169.49') #connection to labwide network
self.dv = self.cxn.data_vault
self.rf = self.cxn.trap_drive
self.pulser = self.cxn.pulser
self.pmt = self.cxn.normalpmtflow
self.seqP = Bunch(**seqParams)
self.expP = Bunch(**exprtParams)
self.xtal = Crystallizer(self.pulser, self.pmt, self.rf)
self.Binner = None
class IonSwap():
''''
This experiment examines the probability of ions swapping places during heating.
After all cooling lights are switched off, the crystal is heated with far blue light for a variable time. Readout is meant to be done with a near resonant light.
Typically vary:
axial_heat
heating delay
Features:
729nm used to tag one of the ions to detect position swapping. 854nm used to rebrigthen all the ions.
866 is switched off together with 397 to prevent cooling when it's not intended
automatic crystallization routine to reduce necessary time to crystallize the ions
'''
experimentName = 'IonSwap'
def __init__(self, seqParams, exprtParams):
#connect and define servers we'll be using
self.cxn = labrad.connect()
self.cxnlab = labrad.connect('192.168.169.49') #connection to labwide network
self.dv = self.cxn.data_vault
self.rf = self.cxn.trap_drive
self.pulser = self.cxn.pulser
self.pmt = self.cxn.normalpmtflow
self.seqP = Bunch(**seqParams)
self.expP = Bunch(**exprtParams)
self.xtal = Crystallizer(self.pulser, self.pmt, self.rf)
self.Binner = None
def initialize(self):
#get initialize count for crystallization
self.xtal.get_initial_rate()
#directory name and initial variables
self.dirappend = time.strftime("%Y%b%d_%H%M_%S",time.localtime())
self.topdirectory = time.strftime("%Y%b%d",time.localtime())
self.setupLogic()
#get the count rate for the crystal at the same parameters as crystallization
self.pulser.select_dds_channel('110DP')
self.pulser.frequency(self.seqP.xtal_freq_397)
self.pulser.amplitude(self.seqP.xtal_ampl_397)
self.pulser.select_dds_channel('866DP')
self.pulser.amplitude(self.seqP.xtal_ampl_866)
self.programPulser()
#data processing setup
self.Binner = Binner(self.seqP.recordTime, self.expP.binTime)
self.Splicer = Splicer(self.seqP.startReadout, self.seqP.endReadout)
def setupCamera(self):
# tell the camera to start waiting for data
# height, width, iterations, numAnalyzedImages
self.cxn.andor_ion_count.collect_data((self.expP.vend - self.expP.vstart + 1), (self.expP.hend - self.expP.hstart + 1), self.expP.iterations, self.expP.numAnalyzedImages)
def setupLogic(self):
self.pulser.switch_auto('axial', True) #axial needs to be inverted, so that high TTL corresponds to light ON
self.pulser.switch_auto('110DP', False) #high TTL corresponds to light OFF
self.pulser.switch_auto('866DP', False) #high TTL corresponds to light OFF
self.pulser.switch_manual('crystallization', False)
def programPulser(self):
seq = IonSwapBackground(self.pulser)
self.pulser.new_sequence()
seq.setVariables(**self.seqP.toDict())
seq.defineSequence()
self.pulser.program_sequence()
self.seqP['recordTime'] = seq.parameters.recordTime
self.seqP['startReadout'] = seq.parameters.startReadout
self.seqP['endReadout'] = seq.parameters.endReadout
def run(self):
sP = self.seqP
xP = self.expP
initpower = self.rf.amplitude()
self.rf.amplitude(xP.rf_power)
time.sleep(xP.rf_settling_time)
self.setupCamera()
self.initialize()
self.sequence()
self.finalize()
self.rf.amplitude(initpower)
print 'DONE {}'.format(self.dirappend)
def sequence(self):
sP = self.seqP
xP = self.expP
#saving timetags
self.dv.cd(['','Experiments', self.experimentName, self.topdirectory, self.dirappend], True)
self.dv.new('timetags',[('Time', 'sec')],[('PMT counts','Arb','Arb')] )
#do iterations
for iteration in range(xP.iterations):
print 'recording trace {0} out of {1}'.format(iteration+1, xP.iterations)
self.pulser.reset_timetags()
self.pulser.start_single()
self.pulser.wait_sequence_done()
self.pulser.stop_sequence()
timetags = self.pulser.get_timetags().asarray
iters = iteration * numpy.ones_like(timetags)
self.dv.add(numpy.vstack((iters,timetags)).transpose())
#add to binning of the entire sequence
self.Binner.add(timetags)
self.Splicer.add(timetags)
#auto crystallization
if xP.auto_crystal:
success = self.xtal.auto_crystallize()
if not success: break
#adding readout counts to data vault:
readout = self.Splicer.getList()
self.dv.cd(['','Experiments', self.experimentName, self.topdirectory, self.dirappend])
self.dv.new('readout',[('Iter', 'Number')], [('PMT counts','Counts/Sec','Counts/Sec')] )
self.dv.add(readout)
#adding binned fluorescence to data vault:
binX, binY = self.Binner.getBinned()
self.dv.cd(['','Experiments', self.experimentName, self.topdirectory, self.dirappend])
self.dv.new('binned',[('Time', 'sec')], [('PMT counts','Arb','Arb')] )
data = numpy.vstack((binX, binY)).transpose()
self.dv.add(data)
self.dv.add_parameter('Window',['Binned Fluorescence'])
self.dv.add_parameter('plotLive',True)
#adding histogram of counts to data vault
binX, binY = self.Splicer.getHistogram()
self.dv.cd(['','Experiments', self.experimentName, self.topdirectory, self.dirappend])
self.dv.new('histogram',[('Time', 'sec')], [('PMT counts','Arb','Arb')] )
data = numpy.vstack((binX, binY)).transpose()
self.dv.add(data)
self.dv.add_parameter('Window',['Histogram'])
# self.dv.add_parameter('plotLive',True)
# gathering parameters and adding them to data vault
measureList = ['trapdrive','endcaps','compensation','dcoffsetonrf','cavity397','cavity866','multiplexer397','multiplexer866','axialDP', 'pulser']
measuredDict = dvParameters.measureParameters(self.cxn, self.cxnlab, measureList)
dvParameters.saveParameters(self.dv, measuredDict)
dvParameters.saveParameters(self.dv, sP.toDict())
dvParameters.saveParameters(self.dv, xP.toDict())
def finalize(self):
for name in ['axial', '110DP']:
self.pulser.switch_manual(name)
below, above = self.Splicer.getPercentage(self.expP.threshold)
print '{0:.1f}% of samples are Melted, below threshold of {1} '.format(100 * below, self.expP.threshold)
print '{0:.1f}% of samples are Crystallized, above threshold of {1} '.format(100 * above, self.expP.threshold)
def __del__(self):
self.cxn.disconnect()
class LatentHeat():
''''
This experiment involves studying the sharpness of crystal to cloud phase transition.
After all cooling lights are switched off, the crystal is heated with far blue light for a variable time. Readout is meant to be done with a near resonant light.
Typically vary:
axial_heat
heating delay
Features:
independent control of hearing duration and waiting time afterwards
866 is switched off together with 397 to prevent cooling when it's not intended
automatic crystallization routine to reduce necessary time to crystallize the ions
frequency switching during the sequence with the RS list mode
'''
experimentName = 'LatentHeat_Auto'
def __init__(self, seqParams, exprtParams):
#connect and define servers we'll be using
self.cxn = labrad.connect()
self.cxnlab = labrad.connect('192.168.169.49') #connection to labwide network
self.dv = self.cxn.data_vault
self.rf = self.cxn.trap_drive
self.pulser = self.cxn.pulser
self.pmt = self.cxn.normalpmtflow
self.laserdac = self.cxn.laserdac
self.seqP = Bunch(**seqParams)
self.expP = Bunch(**exprtParams)
self.xtal = Crystallizer(self.pulser, self.pmt, self.rf)
self.freqCorrect = FrequencyCorrector(self.pmt, self.laserdac)
self.Binner = None
def initialize(self):
#get initialize count for crystallization
self.xtal.get_initial_rate()
#get initial count for frequency correction
self.freqCorrect.get_initial_rate()
#directory name and initial variables
self.dirappend = time.strftime("%Y%b%d_%H%M_%S",time.localtime())
self.topdirectory = time.strftime("%Y%b%d",time.localtime())
self.setupLogic()
#get the count rate for the crystal at the same parameters as crystallization
self.pulser.select_dds_channel('110DP')
self.pulser.frequency(T.Value(self.seqP.xtal_freq_397, 'MHz'))
self.pulser.amplitude(T.Value(self.seqP.xtal_ampl_397, 'dBm'))
self.pulser.select_dds_channel('866DP')
self.pulser.amplitude(T.Value(self.seqP.xtal_ampl_866,'dBm'))
self.programPulser()
#data processing setup
self.Binner = Binner(self.seqP.recordTime, self.expP.binTime)
self.Splicer = Splicer(self.seqP.startReadout, self.seqP.endReadout)
def setupLogic(self):
self.pulser.switch_auto('axial', True) #axial needs to be inverted, so that high TTL corresponds to light ON
self.pulser.switch_auto('110DP', False) #high TTL corresponds to light OFF
self.pulser.switch_auto('866DP', False) #high TTL corresponds to light OFF
self.pulser.switch_manual('crystallization', False)
def programPulser(self):
seq = LatentHeatBackground(self.pulser)
self.pulser.new_sequence()
seq.setVariables(**self.seqP.toDict())
seq.defineSequence()
self.pulser.program_sequence()
self.seqP['recordTime'] = seq.parameters.recordTime
self.seqP['startReadout'] = seq.parameters.startReadout
self.seqP['endReadout'] = seq.parameters.endReadout
def run(self):
sP = self.seqP
xP = self.expP
initpower = self.rf.amplitude()
self.rf.amplitude(xP.rf_power)
time.sleep(xP.rf_settling_time)
self.initialize()
self.sequence()
self.finalize()
self.rf.amplitude(initpower)
print 'DONE {}'.format(self.dirappend)
def sequence(self):
sP = self.seqP
xP = self.expP
#saving timetags
self.dv.cd(['','Experiments', self.experimentName, self.topdirectory, self.dirappend], True)
self.dv.new('timetags',[('Time', 'sec')],[('PMT counts','Arb','Arb')] )
#do iterations
for iteration in range(xP.iterations):
print 'recording trace {0} out of {1}'.format(iteration+1, xP.iterations)
self.pulser.reset_timetags()
self.pulser.start_single()
self.pulser.wait_sequence_done()
self.pulser.stop_sequence()
timetags = self.pulser.get_timetags().asarray
iters = iteration * numpy.ones_like(timetags)
self.dv.add(numpy.vstack((iters,timetags)).transpose())
#add to binning of the entire sequence
self.Binner.add(timetags)
self.Splicer.add(timetags)
#auto crystallization
if xP.auto_crystal:
success = self.xtal.auto_crystallize()
if not success: break
#auto frequency correct
if xP.freq_correct:
if (xP.iterations % xP.freq_correct_interval == 0):
success = self.freqCorrect.auto_correct()
if not success: print 'Cant the drift, Boss'
#adding readout counts to data vault:
readout = self.Splicer.getList()
self.dv.cd(['','Experiments', self.experimentName, self.topdirectory, self.dirappend])
self.dv.new('readout',[('Iter', 'Number')], [('PMT counts','Counts/Sec','Counts/Sec')] )
self.dv.add(readout)
#adding binned fluorescence to data vault:
binX, binY = self.Binner.getBinned()
self.dv.cd(['','Experiments', self.experimentName, self.topdirectory, self.dirappend])
self.dv.new('binned',[('Time', 'sec')], [('PMT counts','Arb','Arb')] )
data = numpy.vstack((binX, binY)).transpose()
self.dv.add(data)
self.dv.add_parameter('Window',['Binned Fluorescence'])
self.dv.add_parameter('plotLive',True)
#adding histogram of counts to data vault
binX, binY = self.Splicer.getHistogram()
self.dv.cd(['','Experiments', self.experimentName, self.topdirectory, self.dirappend])
self.dv.new('histogram',[('Time', 'sec')], [('PMT counts','Arb','Arb')] )
data = numpy.vstack((binX, binY)).transpose()
self.dv.add(data)
self.dv.add_parameter('Window',['Histogram'])
self.dv.add_parameter('plotLive',True)
# gathering parameters and adding them to data vault
measureList = ['trapdrive','endcaps','compensation','dcoffsetonrf','cavity397','cavity866','multiplexer397','multiplexer866','axialDP', 'pulser']
measuredDict = dvParameters.measureParameters(self.cxn, self.cxnlab, measureList)
dvParameters.saveParameters(self.dv, measuredDict)
dvParameters.saveParameters(self.dv, sP.toDict())
dvParameters.saveParameters(self.dv, xP.toDict())
def finalize(self):
for name in ['axial', '110DP']:
self.pulser.switch_manual(name)
below, above = self.Splicer.getPercentage(self.expP.threshold)
print '{0:.1f}% of samples are Melted, below threshold of {1} '.format(100 * below, self.expP.threshold)
print '{0:.1f}% of samples are Crystallized, above threshold of {1} '.format(100 * above, self.expP.threshold)
def __del__(self):
self.cxn.disconnect()
