def create_case_from_dhis2(dhis2_child, domain, user):
"""
Create a new case using the data pulled from DHIS2
:param dhis2_child: TRACKED_ENTITY (i.e. "Child") from DHIS2
:param domain: (str) The name of the domain
:param user: (Document) The owner of the new case
:return: New case ID
"""
case_id = uuid.uuid4().hex
update = {k: dhis2_child[v] for k, v in NUTRITION_ASSESSMENT_PROGRAM_FIELDS.iteritems()}
update['dhis_org_id'] = dhis2_child['Org unit']
# Do the inverse of push_case() to 'Gender' / 'child_gender'
if 'child_gender' in update:
if update['child_gender'] == 'Undefined':
del update['child_gender']
else:
update['child_gender'] = update['child_gender'].lower()
caseblock = CaseBlock(
create=True,
case_id=case_id,
owner_id=user.userID,
user_id=user.userID,
case_type=CASE_TYPE,
case_name=update[CASE_NAME] if CASE_NAME else '',
external_id=dhis2_child['Instance'],
update=update
)
casexml = ElementTree.tostring(caseblock.as_xml())
submit_case_blocks(casexml, domain)
return case_id
def create_case_from_dhis2(dhis2_child, domain, user):
"""
Create a new case using the data pulled from DHIS2
:param dhis2_child: TRACKED_ENTITY (i.e. "Child") from DHIS2
:param domain: (str) The name of the domain
:param user: (Document) The owner of the new case
:return: New case ID
"""
case_id = uuid.uuid4().hex
update = {
k: dhis2_child[v]
for k, v in NUTRITION_ASSESSMENT_PROGRAM_FIELDS.iteritems()
}
update['dhis_org_id'] = dhis2_child['Org unit']
# Do the inverse of push_case() to 'Gender' / 'child_gender'
if 'child_gender' in update:
if update['child_gender'] == 'Undefined':
del update['child_gender']
else:
update['child_gender'] = update['child_gender'].lower()
caseblock = CaseBlock(create=True,
case_id=case_id,
owner_id=user.userID,
user_id=user.userID,
version=V2,
case_type=CASE_TYPE,
case_name=update[CASE_NAME] if CASE_NAME else '',
external_id=dhis2_child['Instance'],
update=update)
casexml = ElementTree.tostring(caseblock.as_xml())
submit_case_blocks(casexml, domain)
return case_id
def _update_instance(self, dhis2_api, case):
instance = dhis2_api.get_te_inst(case['external_id'])
instance.update({dhis2_attr: case[cchq_attr]
for cchq_attr, dhis2_attr in NUTRITION_ASSESSMENT_PROGRAM_FIELDS.iteritems()
if getattr(case, cchq_attr, None)})
if 'Gender' in instance:
instance['Gender'] = instance['Gender'].capitalize()
dhis2_api.update_te_inst(instance)
def _update_instance(self, dhis2_api, case):
instance = dhis2_api.get_te_inst(case['external_id'])
instance.update({
dhis2_attr: case[cchq_attr]
for cchq_attr, dhis2_attr in
NUTRITION_ASSESSMENT_PROGRAM_FIELDS.iteritems()
if getattr(case, cchq_attr, None)
})
if 'Gender' in instance:
instance['Gender'] = instance['Gender'].capitalize()
dhis2_api.update_te_inst(instance)
def push_case(case, dhis2_api):
"""
Create a DHIS2 tracked entity instance from the form's case and enroll in
the nutrition assessment programme.
"""
if getattr(case, 'dhis_org_id', None):
ou_id = case.dhis_org_id # App sets this case property from user custom data
else:
# This is an old case, or org unit is not set. Skip it
return
program_data = {dhis2_attr: case[cchq_attr]
for cchq_attr, dhis2_attr in NUTRITION_ASSESSMENT_PROGRAM_FIELDS.iteritems()
if getattr(case, cchq_attr, None)}
if 'Gender' in program_data:
# Gender is an optionSet. Options are "Male", "Female" and "Undefined"
# cf. http://dhis1.internal.commcarehq.org:8080/dhis/api/optionSets/wG0c8ReYyNz.json
program_data['Gender'] = program_data['Gender'].capitalize() # "male" -> "Male"
else:
program_data['Gender'] = 'Undefined'
try:
# Search for CCHQ Case ID in case previous attempt to register failed.
instance = next(dhis2_api.gen_instances_with_equals(TRACKED_ENTITY, CCHQ_CASE_ID, case['_id']))
instance_id = instance['Instance']
except StopIteration:
# Create a DHIS2 tracked entity instance
instance = {CCHQ_CASE_ID: case['_id']}
instance.update(program_data)
try:
instance_id = dhis2_api.add_te_inst(TRACKED_ENTITY, ou_id, instance)
except (JsonApiError, Dhis2ApiQueryError) as err:
logger.error('Failed to create DHIS2 entity from CCHQ case "%s". DHIS2 server error: %s',
case['_id'], err)
return
# Enroll in Pediatric Nutrition Assessment
date_of_visit = case['date_of_visit'] if getattr(case, 'date_of_visit', None) else date.today()
try:
response = dhis2_api.enroll_in(instance_id, 'Paediatric Nutrition Assessment', date_of_visit, program_data)
except (JsonApiError, Dhis2ApiQueryError) as err:
logger.error('Failed to push CCHQ case "%s" to DHIS2 program "%s". DHIS2 server error: %s',
case['_id'], 'Paediatric Nutrition Assessment', err)
return
if response['status'] != 'SUCCESS':
logger.error('Failed to push CCHQ case "%s" to DHIS2 program "%s". DHIS2 API error: %s',
case['_id'], 'Paediatric Nutrition Assessment', response)
return
# Set external_id in CCHQ to flag the case as pushed.
update_case_external_id(case, instance_id)
def push_child_entities(settings, children):
"""
Register child entities in DHIS2 and enroll them in the Pediatric
Nutrition Assessment program.
:param children: child_gmp cases where external_id is not set
.. Note:: Once pushed, external_id is set to the ID of the
tracked entity instance.
This fulfills the second requirement of `DHIS2 Integration`_.
.. _DHIS2 Integration: https://www.dropbox.com/s/8djk1vh797t6cmt/WV Sri Lanka Detailed Requirements.docx
"""
dhis2_api = Dhis2Api(settings.dhis2.host, settings.dhis2.username, settings.dhis2.password,
settings.dhis2.top_org_unit_name)
# nutrition_id = dhis2_api.get_program_stage_id('Nutrition Assessment')
nutrition_id = dhis2_api.get_program_id('Paediatric Nutrition Assessment')
# For testing
# fallback_org_unit = dhis2_api.get_resource_id('organisationUnits', 'Fermathe Clinic')
today = date.today()
for child in children:
if getattr(child, 'dhis_org_id', None):
ou_id = child.dhis_org_id # App sets this case property from user custom data
else:
# This is an old case, or org unit is not set. Skip it
continue
# For testing:
# ou_id = fallback_org_unit
try:
# Search for CCHQ Case ID in case previous attempt to register failed.
dhis2_child = next(dhis2_api.gen_instances_with_equals('Child', 'CCHQ Case ID', child['_id']))
dhis2_child_id = dhis2_child['Instance']
except StopIteration:
# Register child entity in DHIS2, and set CCHQ Case ID.
dhis2_child = {
'CCHQ Case ID': child['_id'],
}
dhis2_child_id = dhis2_api.add_te_inst(dhis2_child, 'Child', ou_id=ou_id)
# Enroll in Pediatric Nutrition Assessment
date_of_visit = child['date_of_visit'] if getattr(child, 'date_of_visit', None) else today
program_data = {dhis2_attr: child[cchq_attr]
for cchq_attr, dhis2_attr in NUTRITION_ASSESSMENT_PROGRAM_FIELDS.iteritems()
if getattr(child, cchq_attr, None)}
# TODO: DHIS2 says CHDR Number is optional, but throws an error if it's not passed
response = dhis2_api.enroll_in_id(dhis2_child_id, nutrition_id, date_of_visit, program_data)
if response['status'] != 'SUCCESS':
# TODO: Log the error
# Skip to the next case
continue
# Set external_id in CCHQ to flag the case as pushed.
commcare_user = CommCareUser.get(child['owner_id'])
caseblock = CaseBlock(
create=False,
case_id=child['_id'],
version=V2,
external_id=dhis2_child_id
)
casexml = ElementTree.tostring(caseblock.as_xml())
submit_case_blocks(casexml, commcare_user.project.name)
def push_case(case, dhis2_api):
"""
Create a DHIS2 tracked entity instance from the form's case and enroll in
the nutrition assessment programme.
"""
if getattr(case, 'dhis_org_id', None):
ou_id = case.dhis_org_id # App sets this case property from user custom data
else:
# This is an old case, or org unit is not set. Skip it
return
program_data = {
dhis2_attr: case[cchq_attr]
for cchq_attr, dhis2_attr in
NUTRITION_ASSESSMENT_PROGRAM_FIELDS.iteritems()
if getattr(case, cchq_attr, None)
}
if 'Gender' in program_data:
# Gender is an optionSet. Options are "Male", "Female" and "Undefined"
# cf. http://dhis1.internal.commcarehq.org:8080/dhis/api/optionSets/wG0c8ReYyNz.json
program_data['Gender'] = program_data['Gender'].capitalize(
) # "male" -> "Male"
else:
program_data['Gender'] = 'Undefined'
try:
# Search for CCHQ Case ID in case previous attempt to register failed.
instance = next(
dhis2_api.gen_instances_with_equals(TRACKED_ENTITY, CCHQ_CASE_ID,
case['_id']))
