def _load_nifti_volume(self, fname):
""" Return a loaded NiftiImage given the absolute path to the file
Parameters
----------
fname : string
full path to a temporary nifti volume file
"""
from cviewer.io.nipy.api import load_image
return load_image(fname)
height=250,
width=300),
show_labels=False,
),
Group(
Item('scene_x',
editor=SceneEditor(scene_class=Scene),
height=250,
width=300),
Item('scene3d',
editor=SceneEditor(scene_class=MayaviScene),
height=250,
width=300),
show_labels=False,
),
),
resizable=True,
title='Volume Slicer',
)
fname = sys.argv[1]
volume = load_image(fname)
# is it 4d?
if len(volume._data.shape) == 4:
dat = volume._data[0, :, :, :] # we pick the first image in a 4d array
elif len(volume._data.shape) == 3:
dat = volume._data
m = VolumeSlicer(data=dat)
m.configure_traits()
editor=SceneEditor(scene_class=Scene),
height=250, width=300),
Item('scene_z',
editor=SceneEditor(scene_class=Scene),
height=250, width=300),
show_labels=False,
),
Group(
Item('scene_x',
editor=SceneEditor(scene_class=Scene),
height=250, width=300),
Item('scene3d',
editor=SceneEditor(scene_class=MayaviScene),
height=250, width=300),
show_labels=False,
),
),
resizable=True,
title='Volume Slicer',
)
fname = sys.argv[1]
volume = load_image(fname)
# is it 4d?
if len(volume._data.shape) == 4:
dat = volume._data[0,:,:,:] # we pick the first image in a 4d array
elif len(volume._data.shape) == 3:
dat = volume._data
m = VolumeSlicer(data=dat)
m.configure_traits()