def _get_validation_result(email, codes_to_answers):
result = _ValidationResult()
summaries = ParticipantSummaryDao().get_by_email(email)
if not summaries:
result.add_error('No ParticipantSummary found for %r.' % email)
return result
if len(summaries) > 1:
result.add_error('%d ParticipantSummary values found for %r.' %
(len(summaries), email))
return result
participant_id = summaries[0].participantId
code_dao = CodeDao()
qra_dao = QuestionnaireResponseAnswerDao()
with qra_dao.session() as session:
for code_string, answer_string in codes_to_answers.iteritems():
result.tests_count += 1
question_code = code_dao.get_code(PPI_SYSTEM, code_string)
if not question_code:
result.add_error(
'Could not find question code %r, skipping answer %r.' %
(code_string, answer_string))
continue
if question_code.codeType != CodeType.QUESTION:
result.add_error(
'Code %r type is %s, not QUESTION; skipping.' %
(code_string, question_code.codeType))
continue
qras = qra_dao.get_current_answers_for_concepts(
session, participant_id, [question_code.codeId])
qra_values = set()
for qra in qras:
try:
qra_values.add(
_get_value_for_qra(qra, question_code, code_dao,
session))
except ValueError as e:
result.add_error(e.message)
continue
if answer_string:
expected_values = set(
_boolean_to_lower(v.strip())
for v in answer_string.split('|'))
else:
expected_values = set()
if expected_values != qra_values:
result.add_error(
'%s: Expected %s, found %s.' %
(question_code.value, _format_values(expected_values),
_format_values(qra_values)))
return result
def test_insert(self):
participant_id = self.create_participant()
questionnaire_id = self.create_questionnaire('questionnaire1.json')
with open(data_path('questionnaire_response3.json')) as fd:
resource = json.load(fd)
# Sending response with the dummy participant id in the file is an error
self.send_post(_questionnaire_response_url('{participant_id}'),
resource,
expected_status=httplib.NOT_FOUND)
# Fixing participant id but not the questionnaire id is also an error
resource['subject']['reference'] = \
resource['subject']['reference'].format(participant_id=participant_id)
self.send_post(_questionnaire_response_url(participant_id),
resource,
expected_status=httplib.BAD_REQUEST)
# Fix the reference
resource['questionnaire']['reference'] = \
resource['questionnaire']['reference'].format(questionnaire_id=questionnaire_id)
# Sending the response before the consent is an error.
self.send_post(_questionnaire_response_url(participant_id),
resource,
expected_status=httplib.BAD_REQUEST)
# After consent, the post succeeds
self.send_consent(participant_id)
response = self.send_post(_questionnaire_response_url(participant_id),
resource)
resource['id'] = response['id']
# The resource gets rewritten to include the version
resource['questionnaire'][
'reference'] = 'Questionnaire/%s/_history/1' % questionnaire_id
self.assertJsonResponseMatches(resource, response)
# Do a get to fetch the questionnaire
get_response = self.send_get(
_questionnaire_response_url(participant_id) + "/" + response['id'])
self.assertJsonResponseMatches(resource, get_response)
code_dao = CodeDao()
# Ensure we didn't create codes in the extra system
self.assertIsNone(code_dao.get_code(PPI_EXTRA_SYSTEM, 'IgnoreThis'))
name_of_child = code_dao.get_code("sys", "nameOfChild")
birth_weight = code_dao.get_code("sys", "birthWeight")
birth_length = code_dao.get_code("sys", "birthLength")
vitamin_k_dose_1 = code_dao.get_code("sys", "vitaminKDose1")
vitamin_k_dose_2 = code_dao.get_code("sys", "vitaminKDose2")
hep_b_given = code_dao.get_code("sys", "hepBgiven")
abnormalities_at_birth = code_dao.get_code("sys",
"abnormalitiesAtBirth")
answer_dao = QuestionnaireResponseAnswerDao()
with answer_dao.session() as session:
code_ids = [
code.codeId for code in [
name_of_child, birth_weight, birth_length,
vitamin_k_dose_1, vitamin_k_dose_2, hep_b_given,
abnormalities_at_birth
]
]
current_answers = answer_dao.get_current_answers_for_concepts(session,\
from_client_participant_id(participant_id), code_ids)
self.assertEquals(7, len(current_answers))
questionnaire = QuestionnaireDao().get_with_children(questionnaire_id)
question_id_to_answer = {
answer.questionId: answer
for answer in current_answers
}
code_id_to_answer = {
question.codeId:
question_id_to_answer.get(question.questionnaireQuestionId)
for question in questionnaire.questions
}
self.assertEquals("Cathy Jones",
code_id_to_answer[name_of_child.codeId].valueString)
self.assertEquals(3.25,
code_id_to_answer[birth_weight.codeId].valueDecimal)
self.assertEquals(44.3,
code_id_to_answer[birth_length.codeId].valueDecimal)
self.assertEquals(44,
code_id_to_answer[birth_length.codeId].valueInteger)
self.assertEquals(True,
code_id_to_answer[hep_b_given.codeId].valueBoolean)
self.assertEquals(
0, code_id_to_answer[abnormalities_at_birth.codeId].valueInteger)
self.assertEquals(datetime.date(1972, 11, 30),
code_id_to_answer[vitamin_k_dose_1.codeId].valueDate)
self.assertEquals(
datetime.datetime(1972, 11, 30, 12, 34, 42),
code_id_to_answer[vitamin_k_dose_2.codeId].valueDateTime)
def setUp(self):
super(QuestionnaireResponseDaoTest, self).setUp()
self.code_dao = CodeDao()
self.participant_dao = ParticipantDao()
self.questionnaire_dao = QuestionnaireDao()
self.questionnaire_response_dao = QuestionnaireResponseDao()
self.questionnaire_response_answer_dao = QuestionnaireResponseAnswerDao(
)
self.participant_summary_dao = ParticipantSummaryDao()
self.CODE_1 = Code(codeId=1,
system=PPI_SYSTEM,
value=GENDER_IDENTITY_QUESTION_CODE,
display=u'c',
topic=u'd',
codeType=CodeType.QUESTION,
mapped=True)
self.CODE_2 = Code(codeId=2,
system='a',
value='x',
display=u'y',
codeType=CodeType.QUESTION,
mapped=False)
self.CODE_3 = Code(codeId=3,
system='a',
value='c',
codeType=CodeType.ANSWER,
mapped=True,
parentId=1)
self.CODE_4 = Code(codeId=4,
system='a',
value='d',
codeType=CodeType.ANSWER,
mapped=True,
parentId=2)
self.CODE_5 = Code(codeId=5,
system='a',
value='e',
codeType=CodeType.ANSWER,
mapped=False,
parentId=1)
self.CODE_6 = Code(codeId=6,
system='a',
value='f',
codeType=CodeType.ANSWER,
mapped=True,
parentId=1)
self.MODULE_CODE_7 = Code(codeId=7,
system=PPI_SYSTEM,
value=THE_BASICS_PPI_MODULE,
codeType=CodeType.MODULE,
mapped=True)
self.CONCEPT_1 = QuestionnaireConcept(codeId=7)
self.CODE_1_QUESTION_1 = QuestionnaireQuestion(linkId='a',
codeId=1,
repeats=False)
self.CODE_2_QUESTION = QuestionnaireQuestion(linkId='d',
codeId=2,
repeats=True)
# Same code as question 1
self.CODE_1_QUESTION_2 = QuestionnaireQuestion(linkId='x',
codeId=1,
repeats=False)
self.skip_code = Code(codeId=8,
system=PPI_SYSTEM,
value=PMI_SKIP_CODE,
mapped=True,
codeType=CodeType.ANSWER)
config.override_setting(config.CONSENT_PDF_BUCKET, [_FAKE_BUCKET])