def test_get_aggregate_attributes(self):
all_author_pubs = authority_excerpt.first_author_all_pubs(
[gold_aim3_pmids[0]])
response = authority_excerpt.get_aggregate_attributes(
all_author_pubs[0])
gold_response = {
'is_open_access': 0,
'is_microarray_data_creation': 4,
'is_meta_analysis': 0,
'in_ae_or_geo': 0,
'is_multicenter_study': 0,
'in_swissprot': 0,
'in_pdb': 0,
'in_genbank': 0,
'is_geo_reuse': 0
}
assert_equals(response, gold_response)
def test_first_author_all_pubs(self):
all_pubs = authority_excerpt.first_author_all_pubs(gold_aim3_pmids)
gold_first_all_pubs = [
[
'17638889', '16442701', '12776178', '12591240', '12527389',
'12094606', '11518802', '11328825', '10894146', '17638889',
'16442701', '12776178', '12591240', '12527389', '12094606',
'11518802', '11328825', '10894146'
], [],
[
'19013643', '18996570', '15247401', '19013643', '18996570',
'15247401'
],
[
'18852287', '17997859', '17581960', '17360646', '17121828',
'15620361', '15342915', '12391155', '11390640', '11106735',
'10623806', '9702189', '9584134', '18852287', '17997859',
'17581960', '17360646', '17121828', '15620361', '15342915',
'12391155', '11390640', '11106735', '10623806', '9702189',
'9584134'
]
]
assert_equals(all_pubs, gold_first_all_pubs)
def first_author_prev_pubs(pmids):
all_pubs_list = authority.first_author_all_pubs(pmids)
prev_pubs_list = filter_for_previous(pmids, all_pubs_list)
return (prev_pubs_list)
def first_author_num_all_pubs(pmids):
all_pubs_list = authority.first_author_all_pubs(pmids)
counts = [len(pubs) for pubs in all_pubs_list]
return (counts)
def first_author_prev_pubs(pmids):
all_pubs_list = authority.first_author_all_pubs(pmids)
prev_pubs_list = filter_for_previous(pmids, all_pubs_list)
return(prev_pubs_list)
def first_author_num_all_pubs(pmids):
all_pubs_list = authority.first_author_all_pubs(pmids)
counts = [len(pubs) for pubs in all_pubs_list]
return(counts)
def test_get_aggregate_attributes(self):
all_author_pubs = authority_excerpt.first_author_all_pubs([gold_aim3_pmids[0]])
response = authority_excerpt.get_aggregate_attributes(all_author_pubs[0])
gold_response = {'is_open_access': 0, 'is_microarray_data_creation': 4, 'is_meta_analysis': 0, 'in_ae_or_geo': 0, 'is_multicenter_study': 0, 'in_swissprot': 0, 'in_pdb': 0, 'in_genbank': 0, 'is_geo_reuse': 0}
assert_equals(response, gold_response)
def test_first_author_all_pubs(self):
all_pubs = authority_excerpt.first_author_all_pubs(gold_aim3_pmids)
gold_first_all_pubs = [['17638889', '16442701', '12776178', '12591240', '12527389', '12094606', '11518802', '11328825', '10894146', '17638889', '16442701', '12776178', '12591240', '12527389', '12094606', '11518802', '11328825', '10894146'], [], ['19013643', '18996570', '15247401', '19013643', '18996570', '15247401'], ['18852287', '17997859', '17581960', '17360646', '17121828', '15620361', '15342915', '12391155', '11390640', '11106735', '10623806', '9702189', '9584134', '18852287', '17997859', '17581960', '17360646', '17121828', '15620361', '15342915', '12391155', '11390640', '11106735', '10623806', '9702189', '9584134']]
assert_equals(all_pubs, gold_first_all_pubs)
