def compute_dataset(dataset):
if dataset not in dataset_cache:
g = get_eml(dataset)
g_classes, local_idf, lsa = vectorize_ontology(g, idf, lsa_model)
g.classes = g_classes
dataset_cache[dataset] = g
return dataset_cache[dataset]
def compute_dataset(dataset):
if dataset not in dataset_cache:
g = get_eml(dataset)
g_classes, local_idf, lsa = vectorize_ontology(g, idf, lsa_model)
g.classes = g_classes
dataset_cache[dataset] = g
return dataset_cache[dataset]
def view(name=None):
print name
content_type = request.headers[
'Content-Type'] if 'Content-Type' in request.headers else '*/*'
source_graph = get_eml(name)
classes, local_idf = vectorize_ontology(source_graph, self.idf)
source_graph.classes = classes
source_classes = source_graph.classes
source_subtree = set(
source_graph.transitive_subjects(self.NS.RDFS.subClassOf,
self.NS.oboe.MeasurementType))
source_class_subtree = [
x for x in source_classes if x.identifier in source_subtree
and x.identifier != self.NS.oboe.MeasurementType
]
sources = dict([(x.identifier, x) for x in source_class_subtree])
distances = pairwise_sparsedist(source_class_subtree,
self.target_class_subtree)
result = rdflib.Graph()
dataset = result.resource(self.NS.dataset[name])
dataset.add(self.NS.RDF.type, self.NS.dcat.Dataset)
for c, dist in distances.items():
source_class = source_graph.resource(c)
attr_id = source_class.value(self.urn.attributeId)
entity_id = source_class.value(self.urn.entityId)
selector = "xpointer(/eml/dataset/dataTable[%s]/attributeList/attribute[%s])" % (
entity_id, attr_id)
attribute = result.resource(dataset.identifier + '#' +
selector)
attribute.add(self.NS.RDF.type, self.NS.csvw.Column)
sel = result.resource(rdflib.BNode())
attribute.add(self.NS.oa.hasSelector, sel)
sel.add(self.NS.RDF.type, self.NS.oa.FragmentSelector)
sel.add(self.NS.dcterms.conformsTo,
rdflib.URIRef("http://tools.ietf.org/rfc/rfc3023"))
sel.add(self.NS.RDF.value, Literal(selector))
attribute.add(self.NS.RDFS.label, source_class.label())
for target, score in sorted(
dist.items(),
key=lambda x: x[1])[:self.config['top_hits']]:
if score < self.config['max_distance']:
attribute.add(self.NS.dcterms.subject, target)
result.add((target, self.NS.RDFS.label,
self.target_graph.label(target)))
return sadi.serialize(result, accept=content_type)
def view(name=None):
print name
content_type = request.headers['Content-Type'] if 'Content-Type' in request.headers else '*/*'
source_graph = get_eml(name)
classes, local_idf = vectorize_ontology(source_graph, self.idf)
source_graph.classes = classes
source_classes = source_graph.classes
source_subtree = set(source_graph.transitive_subjects(self.NS.RDFS.subClassOf, self.NS.oboe.MeasurementType))
source_class_subtree = [x for x in source_classes
if x.identifier in source_subtree and x.identifier != self.NS.oboe.MeasurementType]
sources = dict([(x.identifier, x) for x in source_class_subtree])
distances = pairwise_sparsedist(source_class_subtree, self.target_class_subtree)
result = rdflib.Graph()
dataset = result.resource(self.NS.dataset[name])
dataset.add(self.NS.RDF.type, self.NS.dcat.Dataset)
for c, dist in distances.items():
source_class = source_graph.resource(c)
attr_id = source_class.value(self.urn.attributeId)
entity_id = source_class.value(self.urn.entityId)
selector = "xpointer(/eml/dataset/dataTable[%s]/attributeList/attribute[%s])" % (entity_id, attr_id)
attribute = result.resource(dataset.identifier+'#'+selector)
attribute.add(self.NS.RDF.type, self.NS.csvw.Column)
sel = result.resource(rdflib.BNode())
attribute.add(self.NS.oa.hasSelector, sel)
sel.add(self.NS.RDF.type, self.NS.oa.FragmentSelector)
sel.add(self.NS.dcterms.conformsTo, rdflib.URIRef("http://tools.ietf.org/rfc/rfc3023"))
sel.add(self.NS.RDF.value, Literal(selector))
attribute.add(self.NS.RDFS.label, source_class.label())
for target, score in sorted(dist.items(), key=lambda x: x[1])[:self.config['top_hits']]:
if score < self.config['max_distance']:
attribute.add(self.NS.dcterms.subject, target)
result.add((target, self.NS.RDFS.label, self.target_graph.label(target)))
return sadi.serialize(result, accept=content_type)
