def test_filter_mapping_file_from_mapping_f(self):
""" filter_mapping_file_from_mapping_f functions as expected """
actual = filter_mapping_file_from_mapping_f(self.tutorial_mapping_f,["PC.354","PC.355"])
expected = """#SampleID BarcodeSequence LinkerPrimerSequence Treatment DOB Description
PC.354 AGCACGAGCCTA YATGCTGCCTCCCGTAGGAGT Control 20061218 Control_mouse_I.D._354
PC.355 AACTCGTCGATG YATGCTGCCTCCCGTAGGAGT Control 20061218 Control_mouse_I.D._355"""
self.assertEqual(actual,expected)
def test_filter_mapping_file_from_mapping_f_negate(self):
""" filter_mapping_file_from_mapping_f functions as expected when negate is True """
actual = filter_mapping_file_from_mapping_f(self.tutorial_mapping_f,
["PC.356", "PC.481", "PC.593", "PC.607", "PC.634", "PC.635", "PC.636"],
negate=True)
expected = """#SampleID BarcodeSequence LinkerPrimerSequence Treatment DOB Description
PC.354 AGCACGAGCCTA YATGCTGCCTCCCGTAGGAGT Control 20061218 Control_mouse_I.D._354
PC.355 AACTCGTCGATG YATGCTGCCTCCCGTAGGAGT Control 20061218 Control_mouse_I.D._355"""
self.assertEqual(actual,expected)
