def run_local(self):
"""
Local run of the study (sequential or parallel)
"""
chdir(self.working_dir)
print('\n\n' + self.run_cmd + '\n\n')
# ~~> here you go run
run_code(self.run_cmd, self.sortie_file)
def run_hpc_exe(self, options, job_id=''):
"""
Run only the execution of telemac-mascaret executable in job scheduler
@return job_id (integer) Id of the job that was launched
"""
# /!\ This is being done in parallel when multiple cas_files
# if not hpcpass:
chdir(self.working_dir)
# ~~> HPC Command line launching runcode
hpccmd = get_hpc_cmd(self.cfg['HPC']).replace('<root>',
self.cfg['root'])
hpccmd = hpccmd.replace('<wdir>', self.working_dir)
if 'id_log' in options:
hpccmd = hpccmd.replace('<id_log>', options.id_log)
else:
hpccmd = hpccmd.replace('<id_log>', 'id.log')
# ~~> HPC dependency between jobs
hpcjob = get_hpc_depend(self.cfg['HPC'])
if hpcjob != '' and job_id != '':
hpccmd = hpccmd + ' ' + hpcjob.replace('<jobid>', job_id)
# ~~> HPC queueing script
stdin_file = self.cfg['HPC']['STDIN'][0] # only one key for now
stdin = self.cfg['HPC']['STDIN'][1]
stdin, sortie = self.fill_hpc_stdin(stdin, options)
# working from working dir
stdin = stdin.replace('<wdir>', self.working_dir)
# ~~> Recreate the <mpi_exec> (option --hpc)
stdin = stdin.replace('<exename>', self.run_cmd)
# /!\ serial mode
stdin = stdin.replace('<mpi_cmdexec>', self.run_cmd)
# ~~> Write to HPC_STDIN
chdir(self.working_dir)
put_file_content(stdin_file, stdin.split('\n'))
# ~~> here you go run
run_code(hpccmd, sortie)
job_id = get_file_content(sortie)[0].strip()
print('... Your simulation (' + self.steering_file +
') has been launched through the queue.\n')
print(' +> You need to wait for completion before re-collecting'
'files using the option --merge\n')
return job_id
def run_hpc_full(self, options, job_id=''):
"""
Rerun whole script in jpbscheduler
@return job_id (integer) Id of the job that was launched
"""
chdir(self.working_dir)
# ~~> HPC Command line launching runcode
hpccmd = get_hpc_cmd(self.cfg['HPC']).replace('<root>',
self.cfg['root'])
hpccmd = hpccmd.replace('<wdir>', self.working_dir)
# ~~> HPC dependency between jobs
hpcjob = get_hpc_depend(self.cfg['HPC'])
if hpcjob != '' and job_id != '':
hpccmd = hpccmd + ' ' + hpcjob.replace('<jobid>', job_id)
# ~~> HPC queueing script
stdin_file = self.cfg['HPC']['STDIN'][0] # only one key for now
stdin = self.cfg['HPC']['STDIN'][1]
stdin = stdin.replace('<exename>', self.steering_file)
# Replacing tags by options values
stdin, sortie = self.fill_hpc_stdin(stdin, options)
# Building runcode.py command
runcmd = 'runcode.py ' + self.code_name + ' --mpi '
if options.config_name != '':
runcmd = runcmd + ' -c ' + options.cfgname
if options.config_file != '':
runcmd = runcmd + ' -f ' + options.config_file
if options.root_dir != '':
runcmd = runcmd + ' -r ' + options.root_dir
runcmd = runcmd + ' -s '
if options.tmpdirectory:
runcmd = runcmd + ' -t '
runcmd = runcmd + ' -w ' + self.working_dir
runcmd = runcmd + ' --nctile ' + str(self.nctile)
runcmd = runcmd + ' --ncnode ' + str(self.ncnode)
runcmd = runcmd + ' --ncsize ' + str(self.ncsize)
if options.split:
runcmd = runcmd + ' --split '
if options.compileonly:
runcmd = runcmd + ' -x '
if options.merge:
runcmd = runcmd + ' --merge '
if options.run:
runcmd = runcmd + ' --run '
runcmd = runcmd + ' ' + self.steering_file
stdin = stdin.replace('<py_runcode>', runcmd)
# ~~> Write to HPC_STDIN
chdir(self.working_dir)
put_file_content(stdin_file, stdin.split('\n'))
# ~~> here you go run
run_code(hpccmd, sortie)
job_id = get_file_content(sortie)[0].strip()
print('... Your simulation ('+self.steering_file+\
') has been launched through the queue.\n')
print(' +> You need to wait for completion '\
'before checking on results.\n')
return job_id