def submit(request):
if request.method == 'POST':
form = SubmitForm(request.POST, request.FILES)
if not form.is_valid():
message = 'Form was invalid'
else:
message = 'Form was valid'
e = Experiment(name=request.POST['experiment'],start_date = timezone.now())
e.save()
handle_file_upload(request.FILES['vcf_file'],UPLOAD_ROOT+str(e.id)+'.vcf')
handle_file_upload(request.FILES['ped_file'],UPLOAD_ROOT+str(e.id)+'.ped')
return render(request, 'tests/submit.html', {'message':message })
else:
form = SubmitForm()
return render(request, 'tests/submit.html', { 'form': form })
def new(request):
if request.method=='POST':
form = NewExperimentForm(request.POST, request.FILES)
if form.is_valid():
e = Experiment(name=request.POST['experiment'],start_date = timezone.now())
e.save()
print '** Saved Experiment %s, id: %s **' % (str(e),e.id,)
handle_file_upload(request.FILES['vcf_file'],UPLOAD_ROOT+str(e.id)+'.vcf')
print '** Uploaded File %s **' % request.FILES['vcf_file'].name
handle_file_upload(request.FILES['ped_file'],UPLOAD_ROOT+str(e.id)+'.ped')
print '** Uploaded File %s **' % request.FILES['ped_file'].name
return redirect('/experiment/'+str(e.id)+'/create/')
else:
return HttpResponse("The form is invalid")
else:
form = NewExperimentForm()
return render(request,'experiment/new.html',{'form':form})
def new(request):
exp = Experiment()
user = request.user
userprofile = UserProfile.objects.get(user=user)
# query the database for all applications
return render_to_response('experiment/new_exp_form.html',
{'userprofile': userprofile},
context_instance=RequestContext(request))
def create_experiment(request, lesson_id):
name = request.POST.get("experiment_name", None)
username = request.user.username
teacher = Teacher.objects.get(username=username)
lesson_list = Lesson.objects.filter(teacher=teacher)
if name:
content = request.POST.get("experiment_content", None)
deadline = request.POST.get("deadline", None)
remark = request.POST.get("remark", None)
# weight = request.POST.get("weight", None)
try:
lesson = Lesson.objects.get(id=lesson_id, teacher=teacher)
except Lesson.DoesNotExist:
return render(request, "base.html")
experiment = Experiment(name=name, content=content, deadline=deadline, remark=remark, lesson=lesson)
experiment.save()
return redirect("create_experiment_success")
else:
return render(request, "teacher/create_experiment.html", {"lesson_list": lesson_list})
def login():
form = SignupForm()
if request.method == 'GET':
return render_template('login.html', form=form)
elif request.method == 'POST':
if form.validate_on_submit():
experiment = Experiment(form.pseudonim.data, form.sex.data == "woman", form.wiek.data)
db_session.add(experiment)
db_session.commit()
return redirect("experiment/{}".format(experiment.id))
else:
return "form not validated"
else:
return "Wrong request"
def init_db():
if True:
meta = MetaData(engine)
meta.reflect()
meta.drop_all()
# import all modules here that might define models so that
# they will be registered properly on the metadata. Otherwise
# you will have to import them first before calling init_db()
import experiment.models
Base.metadata.create_all(bind=engine)
from experiment.models import Experiment
from experiment.models import Config
config = Config(True, 0, 10, 3)
e = Experiment(config)
db_session.add(e)
db_session.commit()
def create_experiment(request):
# define default response
response = {"err": "", "data": ""}
# initialize a counter for apps
i = 0
j = 0
# initialize filename
filenames = {}
filedirs = {}
if request.POST:
period = request.POST["duration"]
unit = request.POST["dur_unit"]
if unit == "W":
period = int(period) * 7
elif unit == "M":
period = int(period) * 30
# Save Experiment
exp = Experiment(
name=request.POST["expname"], description=request.POST["expdesc"], tag=request.POST["exptag"], period=period
)
exp.save()
# upload IRB Letter
file_type = request.FILES["irbletter"].content_type.split("/")[1]
# save IRB Letter
irbname = os.path.join(RAW_IRB_ROOT, str(exp.irb) + "." + file_type)
irbdir = os.path.dirname(irbname)
try:
os.mkdir(irbdir)
except OSError, e:
if e.errno != errno.EEXIST:
response["err"] = {"no": "err1", "msg": "cannot create dir, failed upload"}
raise
# get file handle
fileHandle = open(irbname, "wb+")
for chunk in request.FILES["irbletter"].chunks():
# write it out
fileHandle.write(chunk)
# close file handle
fileHandle.close()
response["data"] = "done"
# add user to the experiment
exp.user.add(request.user)
devs = Device.objects.all()
appnames = request.POST.getlist("appname")
appdescs = request.POST.getlist("appdesc")
apptypes = request.POST.getlist("apptype")
# add the devices to the experiment
for dev in devs:
exp.dev.add(dev)
# add the apps to the experiment
for app in appnames:
application = Application(
user=request.user,
name=app,
# package_name = params['package_name'],
# intent_name = params['intent_name'],
description=appdescs[i],
type=apptypes[i],
active="E",
)
# version = params["version"],
application.save()
exp.app.add(application)
i = i + 1
# create dirs for Applications
filename = os.path.join(RAW_APP_ROOT, str(application.id) + ".apk")
filedir = os.path.dirname(filename)
filenames[app] = filename
filedirs[app] = filedir
exp.save()
exp_profile = ExperimentProfile(experiment=exp)
exp_profile.starttime = datetime.now()
exp_profile.endtime = datetime.now()
exp_profile.save()
# upload experiment
for afile in request.FILES.getlist("upload"):
# create folder for user if it doesn`t exist
try:
os.mkdir(filedirs[appnames[j]])
except OSError, e:
if e.errno != errno.EEXIST:
response["err"] = {"no": "err1", "msg": "cannot create dir, failed upload"}
raise
# get file handle
fileHandle = open(filenames[appnames[j]], "wb+")
# write it out
for chunk in afile.chunks():
fileHandle.write(chunk)
# close file handle
fileHandle.close()
j = j + 1
response["data"] = "done"
def create_experiment(request):
# define default response
response = {"err": "", "data": ""}
#initialize a counter for apps
i = 0
j = 0
#initialize filename
filenames = {}
filedirs = {}
if request.POST:
period = request.POST['duration']
unit = request.POST['dur_unit']
if unit == 'W':
period = int(period) * 7
elif unit == 'M':
period = int(period) * 30
# Save Experiment
exp = Experiment(
name=request.POST['expname'],
description=request.POST['expdesc'],
tag=request.POST['exptag'],
period=period,
)
exp.save()
#upload IRB Letter
file_type = request.FILES['irbletter'].content_type.split('/')[1]
#save IRB Letter
irbname = os.path.join(RAW_IRB_ROOT, str(exp.irb) + '.' + file_type)
irbdir = os.path.dirname(irbname)
try:
os.mkdir(irbdir)
except OSError, e:
if e.errno != errno.EEXIST:
response['err'] = {
'no': 'err1',
'msg': 'cannot create dir, failed upload'
}
raise
# get file handle
fileHandle = open(irbname, 'wb+')
for chunk in request.FILES['irbletter'].chunks():
# write it out
fileHandle.write(chunk)
# close file handle
fileHandle.close()
response['data'] = "done"
#add user to the experiment
exp.user.add(request.user)
devs = Device.objects.all()
appnames = request.POST.getlist('appname')
appdescs = request.POST.getlist('appdesc')
apptypes = request.POST.getlist('apptype')
#add the devices to the experiment
for dev in devs:
exp.dev.add(dev)
#add the apps to the experiment
for app in appnames:
application = Application(
user=request.user,
name=app,
#package_name = params['package_name'],
#intent_name = params['intent_name'],
description=appdescs[i],
type=apptypes[i],
active="E")
#version = params["version"],
application.save()
exp.app.add(application)
i = i + 1
#create dirs for Applications
filename = os.path.join(RAW_APP_ROOT, str(application.id) + ".apk")
filedir = os.path.dirname(filename)
filenames[app] = filename
filedirs[app] = filedir
exp.save()
exp_profile = ExperimentProfile(experiment=exp)
exp_profile.starttime = datetime.now()
exp_profile.endtime = datetime.now()
exp_profile.save()
#upload experiment
for afile in request.FILES.getlist('upload'):
# create folder for user if it doesn`t exist
try:
os.mkdir(filedirs[appnames[j]])
except OSError, e:
if e.errno != errno.EEXIST:
response['err'] = {
'no': 'err1',
'msg': 'cannot create dir, failed upload'
}
raise
# get file handle
fileHandle = open(filenames[appnames[j]], 'wb+')
# write it out
for chunk in afile.chunks():
fileHandle.write(chunk)
# close file handle
fileHandle.close()
j = j + 1
response['data'] = "done"
def get_experiments():
return Experiment.get_all_list()
def get_experiment(experiment_name):
'''
获取实验
'''
return Experiment.get(experiment_name)