def test_existing_data(self):
ende = endecoder.EnDecoder()
page99_bibentry = ende.decode_bibdata(str_fixtures.bibtex_raw0)
for db_class in [databroker.DataBroker, datacache.DataCache]:
self.reset_fs()
fake_env.copy_dir(
self.fs, os.path.join(os.path.dirname(__file__), 'testrepo'),
'repo')
db = db_class('repo', 'repo/doc', create=False)
self.assertEqual(db.pull_bibentry('Page99'), page99_bibentry)
for citekey in [
'10.1371_journal.pone.0038236',
'10.1371journal.pone.0063400', 'journal0063400'
]:
db.pull_bibentry(citekey)
db.pull_metadata(citekey)
with self.assertRaises(IOError):
db.pull_bibentry('citekey')
with self.assertRaises(IOError):
db.pull_metadata('citekey')
db.add_doc('Larry99', 'docsdir://Page99.pdf')
self.assertTrue(
content.check_file('repo/doc/Page99.pdf', fail=False))
self.assertTrue(
content.check_file('repo/doc/Larry99.pdf', fail=False))
db.remove_doc('docsdir://Page99.pdf')
def test_existing_data(self):
ende = endecoder.EnDecoder()
page99_bibentry = ende.decode_bibdata(str_fixtures.bibtex_raw0)
for db_class in [databroker.DataBroker, datacache.DataCache]:
self.fs = fake_env.create_fake_fs([content, filebroker])
fake_env.copy_dir(self.fs, os.path.join(os.path.dirname(__file__), 'testrepo'), 'repo')
db = db_class('repo', create=False)
self.assertEqual(db.pull_bibentry('Page99'), page99_bibentry)
for citekey in ['10.1371_journal.pone.0038236',
'10.1371journal.pone.0063400',
'journal0063400']:
db.pull_bibentry(citekey)
db.pull_metadata(citekey)
with self.assertRaises(IOError):
db.pull_bibentry('citekey')
with self.assertRaises(IOError):
db.pull_metadata('citekey')
db.add_doc('Larry99', 'docsdir://Page99.pdf')
self.assertTrue(content.check_file('repo/doc/Page99.pdf', fail=False))
self.assertTrue(content.check_file('repo/doc/Larry99.pdf', fail=False))
db.remove_doc('docsdir://Page99.pdf')
fake_env.unset_fake_fs([content, filebroker])
def setUp(self, nsec_stat=True):
super(DataCommandTestCase, self).setUp(nsec_stat=nsec_stat)
fake_env.copy_dir(self.fs,
os.path.join(os.path.dirname(__file__), 'data'),
'data')
fake_env.copy_dir(
self.fs, os.path.join(os.path.dirname(__file__), 'bibexamples'),
'bibexamples')
def test_existing_data(self):
fake_env.copy_dir(self.fs, os.path.join(os.path.dirname(__file__), 'testrepo'), 'testrepo')
fb = filebroker.FileBroker('testrepo', create = True)
bib_content = content.read_text_file('testrepo/bib/Page99.bib')
self.assertEqual(fb.pull_bibfile('Page99'), bib_content)
meta_content = content.read_text_file('testrepo/meta/Page99.yaml')
self.assertEqual(fb.pull_metafile('Page99'), meta_content)
def test_existing_data(self):
fake_env.copy_dir(self.fs,
os.path.join(os.path.dirname(__file__), 'testrepo'),
'testrepo')
fb = filebroker.FileBroker('testrepo', create=True)
bib_content = content.read_text_file('testrepo/bib/Page99.bib')
self.assertEqual(fb.pull_bibfile('Page99'), bib_content)
meta_content = content.read_text_file('testrepo/meta/Page99.yaml')
self.assertEqual(fb.pull_metafile('Page99'), meta_content)
def test_doccopy(self):
fake_env.copy_dir(self.fs, os.path.join(os.path.dirname(__file__), 'data'), 'data')
fb = filebroker.FileBroker('testrepo', create = True)
docb = filebroker.DocBroker('testrepo')
docpath = docb.add_doc('Page99', 'data/pagerank.pdf')
self.assertTrue(content.check_file(os.path.join('testrepo', 'doc/Page99.pdf')))
self.assertTrue(docb.in_docsdir(docpath))
self.assertEqual(docpath, 'docsdir://Page99.pdf')
docb.remove_doc('docsdir://Page99.pdf')
self.assertFalse(content.check_file(os.path.join('testrepo', 'doc/Page99.pdf'), fail=False))
with self.assertRaises(IOError):
self.assertFalse(content.check_file(os.path.join('testrepo', 'doc/Page99.pdf'), fail=True))
def test_list_several_no_date(self):
self.execute_cmds(['pubs init -p /testrepo'])
shutil.rmtree('testrepo')
testrepo = os.path.join(os.path.dirname(__file__), 'testrepo')
fake_env.copy_dir(self.fs, testrepo, 'testrepo')
cmds = ['pubs list',
'pubs remove -f Page99',
'pubs list',
'pubs add /data/pagerank.bib -d /data/pagerank.pdf',
'pubs list',
]
outs = self.execute_cmds(cmds)
self.assertEqual(4, len(outs[0].splitlines()))
self.assertEqual(3, len(outs[2].splitlines()))
self.assertEqual(4, len(outs[4].splitlines()))
# Last added should be last
self.assertEqual('[Page99]', outs[4].splitlines()[-1][:8])
def test_list_several_no_date(self):
self.execute_cmds(['pubs init -p /testrepo'])
shutil.rmtree('testrepo')
testrepo = os.path.join(os.path.dirname(__file__), 'testrepo')
fake_env.copy_dir(self.fs, testrepo, 'testrepo')
cmds = [
'pubs list',
'pubs remove -f Page99',
'pubs list',
'pubs add /data/pagerank.bib -d /data/pagerank.pdf',
'pubs list',
]
outs = self.execute_cmds(cmds)
self.assertEqual(4, len(outs[0].splitlines()))
self.assertEqual(3, len(outs[2].splitlines()))
self.assertEqual(4, len(outs[4].splitlines()))
# Last added should be last
self.assertEqual('[Page99]', outs[4].splitlines()[-1][:8])
def test_doccopy(self):
fake_env.copy_dir(self.fs,
os.path.join(os.path.dirname(__file__), 'data'),
'data')
fb = filebroker.FileBroker('testrepo', create=True)
docb = filebroker.DocBroker('testrepo')
docpath = docb.add_doc('Page99', 'data/pagerank.pdf')
self.assertTrue(
content.check_file(os.path.join('testrepo', 'doc/Page99.pdf')))
self.assertTrue(docb.in_docsdir(docpath))
self.assertEqual(docpath, 'docsdir://Page99.pdf')
docb.remove_doc('docsdir://Page99.pdf')
self.assertFalse(
content.check_file(os.path.join('testrepo', 'doc/Page99.pdf'),
fail=False))
with self.assertRaises(IOError):
self.assertFalse(
content.check_file(os.path.join('testrepo', 'doc/Page99.pdf'),
fail=True))
def setUp(self, nsec_stat=True):
super(DataCommandTestCase, self).setUp(nsec_stat=nsec_stat)
fake_env.copy_dir(self.fs, os.path.join(os.path.dirname(__file__), 'data'), 'data')
fake_env.copy_dir(self.fs, os.path.join(os.path.dirname(__file__), 'bibexamples'), 'bibexamples')
def setUp(self):
super(DataCommandTestCase, self).setUp()
fake_env.copy_dir(self.fs, os.path.join(os.path.dirname(__file__), 'data'), 'data')
def setUp(self):
CommandTestCase.setUp(self)
fake_env.copy_dir(self.fs, os.path.join(os.path.dirname(__file__), 'data'), 'data')