def run_flux_sensitivity(**kwargs):
index = kwargs.get('index', 2.0)
sedshape = kwargs.get('sedshape', 'PowerLaw')
cutoff = kwargs.get('cutoff', 1e3)
curvindex = kwargs.get('curvindex', 1.0)
beta = kwargs.get('beta', 0.0)
emin = kwargs.get('emin', 10**1.5)
emax = kwargs.get('emax', 10**6.0)
nbin = kwargs.get('nbin', 18)
glon = kwargs.get('glon', 0.0)
glat = kwargs.get('glat', 0.0)
ltcube_filepath = kwargs.get('ltcube', None)
galdiff_filepath = kwargs.get('galdiff', None)
isodiff_filepath = kwargs.get('isodiff', None)
galdiff_fit_filepath = kwargs.get('galdiff_fit', None)
isodiff_fit_filepath = kwargs.get('isodiff_fit', None)
wcs_npix = kwargs.get('wcs_npix', 40)
wcs_cdelt = kwargs.get('wcs_cdelt', 0.5)
wcs_proj = kwargs.get('wcs_proj', 'AIT')
map_type = kwargs.get('map_type', None)
spatial_model = kwargs.get('spatial_model', 'PointSource')
spatial_size = kwargs.get('spatial_size', 1E-2)
obs_time_yr = kwargs.get('obs_time_yr', None)
event_class = kwargs.get('event_class', 'P8R2_SOURCE_V6')
min_counts = kwargs.get('min_counts', 3.0)
ts_thresh = kwargs.get('ts_thresh', 25.0)
nside = kwargs.get('hpx_nside', 16)
output = kwargs.get('output', None)
event_types = [['FRONT', 'BACK']]
if sedshape == 'PowerLaw':
fn = spectrum.PowerLaw([1E-13, -index], scale=1E3)
elif sedshape == 'PLSuperExpCutoff':
fn = spectrum.PLSuperExpCutoff([1E-13, -index, cutoff, curvindex],
scale=1E3)
elif sedshape == 'LogParabola':
fn = spectrum.LogParabola([1E-13, -index, beta], scale=1E3)
log_ebins = np.linspace(np.log10(emin), np.log10(emax), nbin + 1)
ebins = 10**log_ebins
ectr = np.exp(utils.edge_to_center(np.log(ebins)))
c = SkyCoord(glon, glat, unit='deg', frame='galactic')
if ltcube_filepath is None:
if obs_time_yr is None:
raise Exception('No observation time defined.')
ltc = LTCube.create_from_obs_time(obs_time_yr * 365 * 24 * 3600.)
else:
ltc = LTCube.create(ltcube_filepath)
if obs_time_yr is not None:
ltc._counts *= obs_time_yr * 365 * \
24 * 3600. / (ltc.tstop - ltc.tstart)
gdiff = skymap.Map.create_from_fits(galdiff_filepath)
gdiff_fit = None
if galdiff_fit_filepath is not None:
gdiff_fit = skymap.Map.create_from_fits(galdiff_fit_filepath)
if isodiff_filepath is None:
isodiff = utils.resolve_file_path('iso_%s_v06.txt' % event_class,
search_dirs=[
os.path.join(
'$FERMIPY_ROOT', 'data'),
'$FERMI_DIFFUSE_DIR'
])
isodiff = os.path.expandvars(isodiff)
else:
isodiff = isodiff_filepath
iso = np.loadtxt(isodiff, unpack=True)
iso_fit = None
if isodiff_fit_filepath is not None:
iso_fit = np.loadtxt(isodiff_fit_filepath, unpack=True)
scalc = SensitivityCalc(gdiff,
iso,
ltc,
ebins,
event_class,
event_types,
gdiff_fit=gdiff_fit,
iso_fit=iso_fit,
spatial_model=spatial_model,
spatial_size=spatial_size)
# Compute Maps
map_diff_flux = None
map_diff_npred = None
map_int_flux = None
map_int_npred = None
map_nstep = 500
if map_type == 'hpx':
hpx = HPX(nside, True, 'GAL', ebins=ebins)
map_diff_flux = HpxMap(np.zeros((nbin, hpx.npix)), hpx)
map_diff_npred = HpxMap(np.zeros((nbin, hpx.npix)), hpx)
map_skydir = map_diff_flux.hpx.get_sky_dirs()
for i in range(0, len(map_skydir), map_nstep):
s = slice(i, i + map_nstep)
o = scalc.diff_flux_threshold(map_skydir[s], fn, ts_thresh,
min_counts)
map_diff_flux.data[:, s] = o['flux'].T
map_diff_npred.data[:, s] = o['npred'].T
hpx = HPX(nside, True, 'GAL')
map_int_flux = HpxMap(np.zeros((hpx.npix)), hpx)
map_int_npred = HpxMap(np.zeros((hpx.npix)), hpx)
map_skydir = map_int_flux.hpx.get_sky_dirs()
for i in range(0, len(map_skydir), map_nstep):
s = slice(i, i + map_nstep)
o = scalc.int_flux_threshold(map_skydir[s], fn, ts_thresh,
min_counts)
map_int_flux.data[s] = o['flux']
map_int_npred.data[s] = o['npred']
elif map_type == 'wcs':
wcs_shape = [wcs_npix, wcs_npix]
wcs_size = wcs_npix * wcs_npix
map_diff_flux = Map.create(c,
wcs_cdelt,
wcs_shape,
'GAL',
wcs_proj,
ebins=ebins)
map_diff_npred = Map.create(c,
wcs_cdelt,
wcs_shape,
'GAL',
wcs_proj,
ebins=ebins)
map_skydir = map_diff_flux.get_pixel_skydirs()
for i in range(0, len(map_skydir), map_nstep):
idx = np.unravel_index(np.arange(i, min(i + map_nstep, wcs_size)),
wcs_shape)
s = (slice(None), idx[1], idx[0])
o = scalc.diff_flux_threshold(map_skydir[slice(i, i + map_nstep)],
fn, ts_thresh, min_counts)
map_diff_flux.data[s] = o['flux'].T
map_diff_npred.data[s] = o['npred'].T
map_int_flux = Map.create(c, wcs_cdelt, wcs_shape, 'GAL', wcs_proj)
map_int_npred = Map.create(c, wcs_cdelt, wcs_shape, 'GAL', wcs_proj)
map_skydir = map_int_flux.get_pixel_skydirs()
for i in range(0, len(map_skydir), map_nstep):
idx = np.unravel_index(np.arange(i, min(i + map_nstep, wcs_size)),
wcs_shape)
s = (idx[1], idx[0])
o = scalc.int_flux_threshold(map_skydir[slice(i, i + map_nstep)],
fn, ts_thresh, min_counts)
map_int_flux.data[s] = o['flux']
map_int_npred.data[s] = o['npred']
o = scalc.diff_flux_threshold(c, fn, ts_thresh, min_counts)
cols = [
Column(name='e_min', dtype='f8', data=scalc.ebins[:-1], unit='MeV'),
Column(name='e_ref', dtype='f8', data=o['e_ref'], unit='MeV'),
Column(name='e_max', dtype='f8', data=scalc.ebins[1:], unit='MeV'),
Column(name='flux', dtype='f8', data=o['flux'], unit='ph / (cm2 s)'),
Column(name='eflux', dtype='f8', data=o['eflux'],
unit='MeV / (cm2 s)'),
Column(name='dnde',
dtype='f8',
data=o['dnde'],
unit='ph / (MeV cm2 s)'),
Column(name='e2dnde',
dtype='f8',
data=o['e2dnde'],
unit='MeV / (cm2 s)'),
Column(name='npred', dtype='f8', data=o['npred'], unit='ph')
]
tab_diff = Table(cols)
cols = [
Column(name='index', dtype='f8'),
Column(name='e_min', dtype='f8', unit='MeV'),
Column(name='e_ref', dtype='f8', unit='MeV'),
Column(name='e_max', dtype='f8', unit='MeV'),
Column(name='flux', dtype='f8', unit='ph / (cm2 s)'),
Column(name='eflux', dtype='f8', unit='MeV / (cm2 s)'),
Column(name='dnde', dtype='f8', unit='ph / (MeV cm2 s)'),
Column(name='e2dnde', dtype='f8', unit='MeV / (cm2 s)'),
Column(name='npred', dtype='f8', unit='ph'),
Column(name='ebin_e_min', dtype='f8', unit='MeV', shape=(len(ectr), )),
Column(name='ebin_e_ref', dtype='f8', unit='MeV', shape=(len(ectr), )),
Column(name='ebin_e_max', dtype='f8', unit='MeV', shape=(len(ectr), )),
Column(name='ebin_flux',
dtype='f8',
unit='ph / (cm2 s)',
shape=(len(ectr), )),
Column(name='ebin_eflux',
dtype='f8',
unit='MeV / (cm2 s)',
shape=(len(ectr), )),
Column(name='ebin_dnde',
dtype='f8',
unit='ph / (MeV cm2 s)',
shape=(len(ectr), )),
Column(name='ebin_e2dnde',
dtype='f8',
unit='MeV / (cm2 s)',
shape=(len(ectr), )),
Column(name='ebin_npred', dtype='f8', unit='ph', shape=(len(ectr), ))
]
cols_ebounds = [
Column(name='E_MIN', dtype='f8', unit='MeV', data=ebins[:-1]),
Column(name='E_MAX', dtype='f8', unit='MeV', data=ebins[1:]),
]
tab_int = Table(cols)
tab_ebounds = Table(cols_ebounds)
index = np.linspace(1.0, 5.0, 4 * 4 + 1)
for g in index:
fn = spectrum.PowerLaw([1E-13, -g], scale=10**3.5)
o = scalc.int_flux_threshold(c, fn, ts_thresh, 3.0)
row = [g]
for colname in tab_int.columns:
if colname == 'index':
continue
if 'ebin' in colname:
row += [o['bins'][colname.replace('ebin_', '')]]
else:
row += [o[colname]]
tab_int.add_row(row)
hdulist = fits.HDUList()
hdulist.append(fits.table_to_hdu(tab_diff))
hdulist.append(fits.table_to_hdu(tab_int))
hdulist.append(fits.table_to_hdu(tab_ebounds))
hdulist[1].name = 'DIFF_FLUX'
hdulist[2].name = 'INT_FLUX'
hdulist[3].name = 'EBOUNDS'
if map_type is not None:
hdu = map_diff_flux.create_image_hdu()
hdu.name = 'MAP_DIFF_FLUX'
hdulist.append(hdu)
hdu = map_diff_npred.create_image_hdu()
hdu.name = 'MAP_DIFF_NPRED'
hdulist.append(hdu)
hdu = map_int_flux.create_image_hdu()
hdu.name = 'MAP_INT_FLUX'
hdulist.append(hdu)
hdu = map_int_npred.create_image_hdu()
hdu.name = 'MAP_INT_NPRED'
hdulist.append(hdu)
hdulist.writeto(output, clobber=True)
def run_flux_sensitivity(**kwargs):
index = kwargs.get('index', 2.0)
emin = kwargs.get('emin', 10**1.5)
emax = kwargs.get('emax', 10**6.0)
nbin = kwargs.get('nbin', 18)
glon = kwargs.get('glon', 0.0)
glat = kwargs.get('glat', 0.0)
ltcube_filepath = kwargs.get('ltcube', None)
galdiff_filepath = kwargs.get('galdiff', None)
isodiff_filepath = kwargs.get('isodiff', None)
obs_time_yr = kwargs.get('obs_time_yr', None)
event_class = kwargs.get('event_class', 'P8R2_SOURCE_V6')
min_counts = kwargs.get('min_counts', 3.0)
ts_thresh = kwargs.get('ts_thresh', 25.0)
output = kwargs.get('output', None)
event_types = [['FRONT', 'BACK']]
fn = spectrum.PowerLaw([1E-13, -index], scale=1E3)
log_ebins = np.linspace(np.log10(emin),
np.log10(emax), nbin + 1)
ebins = 10**log_ebins
ectr = np.exp(utils.edge_to_center(np.log(ebins)))
c = SkyCoord(glon, glat, unit='deg', frame='galactic')
if ltcube_filepath is None:
if obs_time_yr is None:
raise Exception('No observation time defined.')
ltc = LTCube.create_from_obs_time(obs_time_yr * 365 * 24 * 3600.)
else:
ltc = LTCube.create(ltcube_filepath)
if obs_time_yr is not None:
ltc._counts *= obs_time_yr * 365 * \
24 * 3600. / (ltc.tstop - ltc.tstart)
gdiff = skymap.Map.create_from_fits(galdiff_filepath)
if isodiff_filepath is None:
isodiff = utils.resolve_file_path('iso_%s_v06.txt' % event_class,
search_dirs=[os.path.join('$FERMIPY_ROOT', 'data'),
'$FERMI_DIFFUSE_DIR'])
isodiff = os.path.expandvars(isodiff)
else:
isodiff = isodiff_filepath
iso = np.loadtxt(isodiff, unpack=True)
scalc = SensitivityCalc(gdiff, iso, ltc, ebins,
event_class, event_types)
o = scalc.diff_flux_threshold(c, fn, ts_thresh, min_counts)
cols = [Column(name='e_min', dtype='f8', data=scalc.ebins[:-1], unit='MeV'),
Column(name='e_ref', dtype='f8', data=o['e_ref'], unit='MeV'),
Column(name='e_max', dtype='f8', data=scalc.ebins[1:], unit='MeV'),
Column(name='flux', dtype='f8', data=o[
'flux'], unit='ph / (cm2 s)'),
Column(name='eflux', dtype='f8', data=o[
'eflux'], unit='MeV / (cm2 s)'),
Column(name='dnde', dtype='f8', data=o['dnde'],
unit='ph / (MeV cm2 s)'),
Column(name='e2dnde', dtype='f8',
data=o['e2dnde'], unit='MeV / (cm2 s)'),
Column(name='npred', dtype='f8', data=o['npred'], unit='ph')]
tab_diff = Table(cols)
cols = [Column(name='index', dtype='f8'),
Column(name='e_min', dtype='f8', unit='MeV'),
Column(name='e_ref', dtype='f8', unit='MeV'),
Column(name='e_max', dtype='f8', unit='MeV'),
Column(name='flux', dtype='f8', unit='ph / (cm2 s)'),
Column(name='eflux', dtype='f8', unit='MeV / (cm2 s)'),
Column(name='dnde', dtype='f8', unit='ph / (MeV cm2 s)'),
Column(name='e2dnde', dtype='f8', unit='MeV / (cm2 s)'),
Column(name='npred', dtype='f8', unit='ph')]
cols_ebin = [Column(name='index', dtype='f8'),
Column(name='e_min', dtype='f8',
unit='MeV', shape=(len(ectr),)),
Column(name='e_ref', dtype='f8',
unit='MeV', shape=(len(ectr),)),
Column(name='e_max', dtype='f8',
unit='MeV', shape=(len(ectr),)),
Column(name='flux', dtype='f8',
unit='ph / (cm2 s)', shape=(len(ectr),)),
Column(name='eflux', dtype='f8',
unit='MeV / (cm2 s)', shape=(len(ectr),)),
Column(name='dnde', dtype='f8',
unit='ph / (MeV cm2 s)', shape=(len(ectr),)),
Column(name='e2dnde', dtype='f8',
unit='MeV / (cm2 s)', shape=(len(ectr),)),
Column(name='npred', dtype='f8', unit='ph', shape=(len(ectr),))]
tab_int = Table(cols)
tab_int_ebin = Table(cols_ebin)
index = np.linspace(1.0, 5.0, 4 * 4 + 1)
for g in index:
fn = spectrum.PowerLaw([1E-13, -g], scale=10**3.5)
o = scalc.int_flux_threshold(c, fn, ts_thresh, 3.0)
row = [g]
for colname in tab_int.columns:
if not colname in o:
continue
row += [o[colname]]
tab_int.add_row(row)
row = [g]
for colname in tab_int.columns:
if not colname in o:
continue
row += [o['bins'][colname]]
tab_int_ebin.add_row(row)
hdulist = fits.HDUList()
hdulist.append(fits.table_to_hdu(tab_diff))
hdulist.append(fits.table_to_hdu(tab_int))
hdulist.append(fits.table_to_hdu(tab_int_ebin))
hdulist[1].name = 'DIFF_FLUX'
hdulist[2].name = 'INT_FLUX'
hdulist[3].name = 'INT_FLUX_EBIN'
hdulist.writeto(output, clobber=True)
def main():
usage = "usage: %(prog)s [options]"
description = "Calculate the LAT point-source flux sensitivity."
parser = argparse.ArgumentParser(usage=usage, description=description)
parser.add_argument('--ltcube',
default=None,
help='Set the path to the livetime cube.')
parser.add_argument('--galdiff',
default=None,
required=True,
help='Set the path to the galactic diffuse model.')
parser.add_argument(
'--isodiff',
default=None,
help='Set the path to the isotropic model. If none then the '
'default model will be used for the given event class.')
parser.add_argument('--ts_thresh',
default=25.0,
type=float,
help='Set the detection threshold.')
parser.add_argument('--min_counts',
default=3.0,
type=float,
help='Set the minimum number of counts.')
parser.add_argument(
'--joint',
default=False,
action='store_true',
help='Compute sensitivity using joint-likelihood of all event types.')
parser.add_argument('--event_class',
default='P8R2_SOURCE_V6',
help='Set the IRF name (e.g. P8R2_SOURCE_V6).')
parser.add_argument('--glon',
default=0.0,
type=float,
help='Galactic longitude.')
parser.add_argument('--glat',
default=0.0,
type=float,
help='Galactic latitude.')
parser.add_argument('--index',
default=2.0,
type=float,
help='Source power-law index.')
parser.add_argument('--emin',
default=10**1.5,
type=float,
help='Minimum energy in MeV.')
parser.add_argument('--emax',
default=10**6.0,
type=float,
help='Maximum energy in MeV.')
parser.add_argument(
'--nbin',
default=18,
type=int,
help='Number of energy bins for differential flux calculation.')
parser.add_argument('--output',
default='output.fits',
type=str,
help='Output filename.')
parser.add_argument(
'--obs_time_yr',
default=None,
type=float,
help=
'Rescale the livetime cube to this observation time in years. If none then the '
'calculation will use the intrinsic observation time of the livetime cube.'
)
args = parser.parse_args()
event_types = [['FRONT', 'BACK']]
fn = spectrum.PowerLaw([1E-13, -args.index], scale=1E3)
log_ebins = np.linspace(np.log10(args.emin), np.log10(args.emax),
args.nbin + 1)
ebins = 10**log_ebins
ectr = np.exp(utils.edge_to_center(np.log(ebins)))
c = SkyCoord(args.glon, args.glat, unit='deg', frame='galactic')
if args.ltcube is None:
if args.obs_time_yr is None:
raise Exception('No observation time defined.')
ltc = irfs.LTCube.create_from_obs_time(args.obs_time_yr * 365 * 24 *
3600.)
else:
ltc = irfs.LTCube.create(args.ltcube)
if args.obs_time_yr is not None:
ltc._counts *= args.obs_time_yr * 365 * \
24 * 3600. / (ltc.tstop - ltc.tstart)
gdiff = skymap.Map.create_from_fits(args.galdiff)
if args.isodiff is None:
isodiff = utils.resolve_file_path('iso_%s_v06.txt' % args.event_class,
search_dirs=[
os.path.join(
'$FERMIPY_ROOT', 'data'),
'$FERMI_DIFFUSE_DIR'
])
isodiff = os.path.expandvars(isodiff)
else:
isodiff = args.isodiff
iso = np.loadtxt(isodiff, unpack=True)
scalc = SensitivityCalc(gdiff, iso, ltc, ebins, args.event_class,
event_types)
o = scalc.diff_flux_threshold(c, fn, args.ts_thresh, args.min_counts)
cols = [
Column(name='e_min', dtype='f8', data=scalc.ebins[:-1], unit='MeV'),
Column(name='e_ref', dtype='f8', data=o['e_ref'], unit='MeV'),
Column(name='e_max', dtype='f8', data=scalc.ebins[1:], unit='MeV'),
Column(name='flux', dtype='f8', data=o['flux'], unit='ph / (cm2 s)'),
Column(name='eflux', dtype='f8', data=o['eflux'],
unit='MeV / (cm2 s)'),
Column(name='dnde',
dtype='f8',
data=o['dnde'],
unit='ph / (MeV cm2 s)'),
Column(name='e2dnde',
dtype='f8',
data=o['e2dnde'],
unit='MeV / (cm2 s)'),
Column(name='npred', dtype='f8', data=o['npred'], unit='ph')
]
tab_diff = Table(cols)
cols = [
Column(name='index', dtype='f8'),
Column(name='e_min', dtype='f8', unit='MeV'),
Column(name='e_ref', dtype='f8', unit='MeV'),
Column(name='e_max', dtype='f8', unit='MeV'),
Column(name='flux', dtype='f8', unit='ph / (cm2 s)'),
Column(name='eflux', dtype='f8', unit='MeV / (cm2 s)'),
Column(name='dnde', dtype='f8', unit='ph / (MeV cm2 s)'),
Column(name='e2dnde', dtype='f8', unit='MeV / (cm2 s)'),
Column(name='npred', dtype='f8', unit='ph')
]
cols_ebin = [
Column(name='index', dtype='f8'),
Column(name='e_min', dtype='f8', unit='MeV', shape=(len(ectr), )),
Column(name='e_ref', dtype='f8', unit='MeV', shape=(len(ectr), )),
Column(name='e_max', dtype='f8', unit='MeV', shape=(len(ectr), )),
Column(name='flux',
dtype='f8',
unit='ph / (cm2 s)',
shape=(len(ectr), )),
Column(name='eflux',
dtype='f8',
unit='MeV / (cm2 s)',
shape=(len(ectr), )),
Column(name='dnde',
dtype='f8',
unit='ph / (MeV cm2 s)',
shape=(len(ectr), )),
Column(name='e2dnde',
dtype='f8',
unit='MeV / (cm2 s)',
shape=(len(ectr), )),
Column(name='npred', dtype='f8', unit='ph', shape=(len(ectr), ))
]
tab_int = Table(cols)
tab_int_ebin = Table(cols_ebin)
index = np.linspace(1.0, 5.0, 4 * 4 + 1)
for g in index:
fn = spectrum.PowerLaw([1E-13, -g], scale=10**3.5)
o = scalc.int_flux_threshold(c, fn, args.ts_thresh, 3.0)
row = [g]
for colname in tab_int.columns:
if not colname in o:
continue
row += [o[colname]]
tab_int.add_row(row)
row = [g]
for colname in tab_int.columns:
if not colname in o:
continue
row += [o['bins'][colname]]
tab_int_ebin.add_row(row)
hdulist = fits.HDUList()
hdulist.append(fits.table_to_hdu(tab_diff))
hdulist.append(fits.table_to_hdu(tab_int))
hdulist.append(fits.table_to_hdu(tab_int_ebin))
hdulist[1].name = 'DIFF_FLUX'
hdulist[2].name = 'INT_FLUX'
hdulist[3].name = 'INT_FLUX_EBIN'
hdulist.writeto(args.output, clobber=True)
def run_flux_sensitivity(**kwargs):
index = kwargs.get('index', 2.0)
sedshape = kwargs.get('sedshape', 'PowerLaw')
cutoff = kwargs.get('cutoff', 1e3)
curvindex = kwargs.get('curvindex', 1.0)
beta = kwargs.get('beta', 0.0)
dmmass = kwargs.get('DMmass', 100.0)
dmchannel = kwargs.get('DMchannel', 'bb')
emin = kwargs.get('emin', 10**1.5)
emax = kwargs.get('emax', 10**6.0)
nbin = kwargs.get('nbin', 18)
glon = kwargs.get('glon', 0.0)
glat = kwargs.get('glat', 0.0)
ltcube_filepath = kwargs.get('ltcube', None)
galdiff_filepath = kwargs.get('galdiff', None)
isodiff_filepath = kwargs.get('isodiff', None)
galdiff_fit_filepath = kwargs.get('galdiff_fit', None)
isodiff_fit_filepath = kwargs.get('isodiff_fit', None)
wcs_npix = kwargs.get('wcs_npix', 40)
wcs_cdelt = kwargs.get('wcs_cdelt', 0.5)
wcs_proj = kwargs.get('wcs_proj', 'AIT')
map_type = kwargs.get('map_type', None)
spatial_model = kwargs.get('spatial_model', 'PointSource')
spatial_size = kwargs.get('spatial_size', 1E-2)
obs_time_yr = kwargs.get('obs_time_yr', None)
event_class = kwargs.get('event_class', 'P8R2_SOURCE_V6')
min_counts = kwargs.get('min_counts', 3.0)
ts_thresh = kwargs.get('ts_thresh', 25.0)
nside = kwargs.get('hpx_nside', 16)
output = kwargs.get('output', None)
event_types = [['FRONT', 'BACK']]
if sedshape == 'PowerLaw':
fn = spectrum.PowerLaw([1E-13, -index], scale=1E3)
elif sedshape == 'PLSuperExpCutoff':
fn = spectrum.PLSuperExpCutoff(
[1E-13, -index, cutoff, curvindex], scale=1E3)
elif sedshape == 'LogParabola':
fn = spectrum.LogParabola([1E-13, -index, beta], scale=1E3)
elif sedshape == 'DM':
fn = spectrum.DMFitFunction([1E-26, dmmass], chan=dmchannel)
log_ebins = np.linspace(np.log10(emin),
np.log10(emax), nbin + 1)
ebins = 10**log_ebins
ectr = np.exp(utils.edge_to_center(np.log(ebins)))
c = SkyCoord(glon, glat, unit='deg', frame='galactic')
if ltcube_filepath is None:
if obs_time_yr is None:
raise Exception('No observation time defined.')
ltc = LTCube.create_from_obs_time(obs_time_yr * 365 * 24 * 3600.)
else:
ltc = LTCube.create(ltcube_filepath)
if obs_time_yr is not None:
ltc._counts *= obs_time_yr * 365 * \
24 * 3600. / (ltc.tstop - ltc.tstart)
gdiff = skymap.Map.create_from_fits(galdiff_filepath)
gdiff_fit = None
if galdiff_fit_filepath is not None:
gdiff_fit = skymap.Map.create_from_fits(galdiff_fit_filepath)
if isodiff_filepath is None:
isodiff = utils.resolve_file_path('iso_%s_v06.txt' % event_class,
search_dirs=[os.path.join('$FERMIPY_ROOT', 'data'),
'$FERMI_DIFFUSE_DIR'])
isodiff = os.path.expandvars(isodiff)
else:
isodiff = isodiff_filepath
iso = np.loadtxt(isodiff, unpack=True)
iso_fit = None
if isodiff_fit_filepath is not None:
iso_fit = np.loadtxt(isodiff_fit_filepath, unpack=True)
scalc = SensitivityCalc(gdiff, iso, ltc, ebins,
event_class, event_types, gdiff_fit=gdiff_fit,
iso_fit=iso_fit, spatial_model=spatial_model,
spatial_size=spatial_size)
# Compute Maps
map_diff_flux = None
map_diff_npred = None
map_int_flux = None
map_int_npred = None
map_nstep = 500
if map_type == 'hpx':
hpx = HPX(nside, True, 'GAL', ebins=ebins)
map_diff_flux = HpxMap(np.zeros((nbin, hpx.npix)), hpx)
map_diff_npred = HpxMap(np.zeros((nbin, hpx.npix)), hpx)
map_skydir = map_diff_flux.hpx.get_sky_dirs()
for i in range(0, len(map_skydir), map_nstep):
s = slice(i, i + map_nstep)
o = scalc.diff_flux_threshold(
map_skydir[s], fn, ts_thresh, min_counts)
map_diff_flux.data[:, s] = o['flux'].T
map_diff_npred.data[:, s] = o['npred'].T
hpx = HPX(nside, True, 'GAL')
map_int_flux = HpxMap(np.zeros((hpx.npix)), hpx)
map_int_npred = HpxMap(np.zeros((hpx.npix)), hpx)
map_skydir = map_int_flux.hpx.get_sky_dirs()
for i in range(0, len(map_skydir), map_nstep):
s = slice(i, i + map_nstep)
o = scalc.int_flux_threshold(
map_skydir[s], fn, ts_thresh, min_counts)
map_int_flux.data[s] = o['flux']
map_int_npred.data[s] = o['npred']
elif map_type == 'wcs':
wcs_shape = [wcs_npix, wcs_npix]
wcs_size = wcs_npix * wcs_npix
map_diff_flux = Map.create(
c, wcs_cdelt, wcs_shape, 'GAL', wcs_proj, ebins=ebins)
map_diff_npred = Map.create(
c, wcs_cdelt, wcs_shape, 'GAL', wcs_proj, ebins=ebins)
map_skydir = map_diff_flux.get_pixel_skydirs()
for i in range(0, len(map_skydir), map_nstep):
idx = np.unravel_index(
np.arange(i, min(i + map_nstep, wcs_size)), wcs_shape)
s = (slice(None), idx[1], idx[0])
o = scalc.diff_flux_threshold(
map_skydir[slice(i, i + map_nstep)], fn, ts_thresh, min_counts)
map_diff_flux.data[s] = o['flux'].T
map_diff_npred.data[s] = o['npred'].T
map_int_flux = Map.create(c, wcs_cdelt, wcs_shape, 'GAL', wcs_proj)
map_int_npred = Map.create(c, wcs_cdelt, wcs_shape, 'GAL', wcs_proj)
map_skydir = map_int_flux.get_pixel_skydirs()
for i in range(0, len(map_skydir), map_nstep):
idx = np.unravel_index(
np.arange(i, min(i + map_nstep, wcs_size)), wcs_shape)
s = (idx[1], idx[0])
o = scalc.int_flux_threshold(
map_skydir[slice(i, i + map_nstep)], fn, ts_thresh, min_counts)
map_int_flux.data[s] = o['flux']
map_int_npred.data[s] = o['npred']
o = scalc.diff_flux_threshold(c, fn, ts_thresh, min_counts)
cols = [Column(name='e_min', dtype='f8', data=scalc.ebins[:-1], unit='MeV'),
Column(name='e_ref', dtype='f8', data=o['e_ref'], unit='MeV'),
Column(name='e_max', dtype='f8', data=scalc.ebins[1:], unit='MeV'),
Column(name='flux', dtype='f8', data=o[
'flux'], unit='ph / (cm2 s)'),
Column(name='eflux', dtype='f8', data=o[
'eflux'], unit='MeV / (cm2 s)'),
Column(name='dnde', dtype='f8', data=o['dnde'],
unit='ph / (MeV cm2 s)'),
Column(name='e2dnde', dtype='f8',
data=o['e2dnde'], unit='MeV / (cm2 s)'),
Column(name='npred', dtype='f8', data=o['npred'], unit='ph')]
tab_diff = Table(cols)
cols = [Column(name='index', dtype='f8'),
Column(name='e_min', dtype='f8', unit='MeV'),
Column(name='e_ref', dtype='f8', unit='MeV'),
Column(name='e_max', dtype='f8', unit='MeV'),
Column(name='flux', dtype='f8', unit='ph / (cm2 s)'),
Column(name='eflux', dtype='f8', unit='MeV / (cm2 s)'),
Column(name='dnde', dtype='f8', unit='ph / (MeV cm2 s)'),
Column(name='e2dnde', dtype='f8', unit='MeV / (cm2 s)'),
Column(name='npred', dtype='f8', unit='ph'),
Column(name='ebin_e_min', dtype='f8',
unit='MeV', shape=(len(ectr),)),
Column(name='ebin_e_ref', dtype='f8',
unit='MeV', shape=(len(ectr),)),
Column(name='ebin_e_max', dtype='f8',
unit='MeV', shape=(len(ectr),)),
Column(name='ebin_flux', dtype='f8',
unit='ph / (cm2 s)', shape=(len(ectr),)),
Column(name='ebin_eflux', dtype='f8',
unit='MeV / (cm2 s)', shape=(len(ectr),)),
Column(name='ebin_dnde', dtype='f8',
unit='ph / (MeV cm2 s)', shape=(len(ectr),)),
Column(name='ebin_e2dnde', dtype='f8',
unit='MeV / (cm2 s)', shape=(len(ectr),)),
Column(name='ebin_npred', dtype='f8', unit='ph', shape=(len(ectr),))]
cols_ebounds = [Column(name='E_MIN', dtype='f8',
unit='MeV', data=ebins[:-1]),
Column(name='E_MAX', dtype='f8',
unit='MeV', data=ebins[1:]), ]
tab_int = Table(cols)
tab_ebounds = Table(cols_ebounds)
index = np.linspace(1.0, 5.0, 4 * 4 + 1)
for g in index:
fn = spectrum.PowerLaw([1E-13, -g], scale=10**3.5)
o = scalc.int_flux_threshold(c, fn, ts_thresh, 3.0)
row = [g]
for colname in tab_int.columns:
if colname == 'index':
continue
if 'ebin' in colname:
row += [o['bins'][colname.replace('ebin_', '')]]
else:
row += [o[colname]]
tab_int.add_row(row)
hdulist = fits.HDUList()
hdulist.append(fits.table_to_hdu(tab_diff))
hdulist.append(fits.table_to_hdu(tab_int))
hdulist.append(fits.table_to_hdu(tab_ebounds))
hdulist[1].name = 'DIFF_FLUX'
hdulist[2].name = 'INT_FLUX'
hdulist[3].name = 'EBOUNDS'
if map_type is not None:
hdu = map_diff_flux.create_image_hdu()
hdu.name = 'MAP_DIFF_FLUX'
hdulist.append(hdu)
hdu = map_diff_npred.create_image_hdu()
hdu.name = 'MAP_DIFF_NPRED'
hdulist.append(hdu)
hdu = map_int_flux.create_image_hdu()
hdu.name = 'MAP_INT_FLUX'
hdulist.append(hdu)
hdu = map_int_npred.create_image_hdu()
hdu.name = 'MAP_INT_NPRED'
hdulist.append(hdu)
hdulist.writeto(output, overwrite=True)