def test_missing_both_fmri_prep_files(self):
'''Expect FileNotFoundError when neither fmri_prep nor fmri_prep_aroma
were specified.'''
denoise = Denoise(
conf_prep=self.conf_prep,
pipeline=self.pipeline,
output_dir=self.out_dir.name,
)
with self.assertRaises(FileNotFoundError):
denoise.run()
def test_missing_fmri_prep(self):
'''Expect FileNotFoundError if pipeline without aroma is selected but
only fmri_prep_aroma is provided.'''
self.pipeline['aroma'] = False
denoise = Denoise(
fmri_prep_aroma=self.fmri_prep_aroma,
conf_prep=self.conf_prep,
pipeline=self.pipeline,
output_dir=self.out_dir.name,
)
with self.assertRaises(FileNotFoundError):
denoise.run()
def test_missing_noaroma_files_on_aroma_pipeline(self):
self.pipeline['aroma'] = True
denoise = Denoise(fmri_prep_aroma=self.fmri_prep,
conf_prep=self.conf_prep,
pipeline=self.pipeline,
output_dir=self.out_dir.name)
def _(runtime):
denoise._validate_fmri_prep_files()
return runtime
denoise._run_interface = _
denoise.run()