def test_010_user_reqistration_single_user_info_forms(self):
''' Testing user registration with a single user info form '''
# lets delete the 'Researcher' user info form
self.login('*****@*****.**')
form_two_latest = get_latest_form(form_two_name)
form_two_latest.current.deleted = True
sa_session.add(form_two_latest.current)
sa_session.flush()
self.home()
self.visit_page('forms/manage?sort=create_time&f-deleted=True')
self.check_page_for_string(form_two_latest.name)
self.logout()
# user a new user with 'Student' user info form
form_one = get_latest_form(form_one_name)
user_info_values = ['Educational', 'Penn State', True]
self.create_user_with_info('*****@*****.**',
'testuser',
'test12',
user_info_forms='single',
user_info_form_id=form_one.id,
user_info_values=user_info_values)
self.home()
self.visit_page("user/show_info")
self.check_page_for_string("Manage User Information")
self.check_page_for_string(user_info_values[0])
self.check_page_for_string(user_info_values[1])
self.check_page_for_string(
'<input type="checkbox" name="field_2" value="true" checked>')
def test_045_change_permissions_on_current_history(self):
"""Testing changing permissions on the current history"""
# Logged in as regular_user3
self.logout()
self.login(email=admin_user.email)
# Current history is history4
self.new_history()
global history5
history5 = (
sa_session.query(galaxy.model.History)
.filter(
and_(
galaxy.model.History.table.c.deleted == False, galaxy.model.History.table.c.user_id == admin_user.id
)
)
.order_by(desc(galaxy.model.History.table.c.create_time))
.first()
)
assert history5 is not None, "Problem retrieving history5 from database"
self.rename_history(self.security.encode_id(history5.id), history5.name, new_name=urllib.quote("history 5"))
# Current history is hostory5
sa_session.refresh(history5)
# Due to the limitations of twill ( not functional with the permissions forms ), we're forced
# to do this manually. At this point, we just want to restrict the access permission on history5
# to the admin_user
global access_action
access_action = galaxy.model.Dataset.permitted_actions.DATASET_ACCESS.action
dhp = galaxy.model.DefaultHistoryPermissions(history5, access_action, admin_user_private_role)
sa_session.add(dhp)
sa_session.flush()
sa_session.refresh(history5)
global history5_default_permissions
history5_default_permissions = [dhp.action for dhp in history5.default_permissions]
# Sort for later comparison
history5_default_permissions.sort()
self.upload_file("1.bed", dbkey="hg18")
history5_dataset1 = None
for hda in history5.datasets:
if hda.name == "1.bed":
history5_dataset1 = hda.dataset
break
assert history5_dataset1 is not None, "Problem retrieving history5_dataset1 from the database"
# The permissions on the dataset should be restricted from sharing with anyone due to the
# inherited history permissions
dataset_permissions = [a.action for a in history5_dataset1.actions]
dataset_permissions.sort()
if dataset_permissions != history5_default_permissions:
err_msg = (
"Dataset permissions for history5_dataset1 (%s) were not correctly inherited from history permissions (%s)"
% (str(dataset_permissions), str(history5_default_permissions))
)
raise AssertionError, err_msg
# Make sure when we logout and login, the history default permissions are preserved
self.logout()
self.login(email=admin_user.email)
sa_session.refresh(history5)
current_history_permissions = [dhp.action for dhp in history5.default_permissions]
current_history_permissions.sort()
if current_history_permissions != history5_default_permissions:
raise AssertionError, "With logout and login, the history default permissions are not preserved"
def test_010_user_reqistration_single_user_info_forms( self ):
''' Testing user registration with a single user info form '''
# lets delete the 'Researcher' user info form
self.login( '*****@*****.**' )
form_two_latest = get_latest_form(form_two_name)
form_two_latest.current.deleted = True
sa_session.add( form_two_latest.current )
sa_session.flush()
self.home()
self.visit_page('forms/manage?sort=create_time&f-deleted=True')
self.check_page_for_string(form_two_latest.name)
self.logout()
# user a new user with 'Student' user info form
form_one = get_latest_form(form_one_name)
user_info_values=['Educational', 'Penn State', True]
self.create_user_with_info( '*****@*****.**', 'testuser', 'test12',
user_info_forms='single',
user_info_form_id=form_one.id,
user_info_values=user_info_values )
self.home()
self.visit_page( "user/show_info" )
self.check_page_for_string( "Manage User Information" )
self.check_page_for_string( user_info_values[0] )
self.check_page_for_string( user_info_values[1] )
self.check_page_for_string( '<input type="checkbox" name="field_2" value="true" checked>' )
def test_020_create_user_as_admin( self ):
''' Testing creating users as an admin '''
self.logout()
self.login( '*****@*****.**' )
form_one = get_latest_form(form_one_name)
user_info_values=['Educational', 'Penn State', True]
self.create_user_with_info( '*****@*****.**', 'testuser', 'test13',
user_info_forms='single',
user_info_form_id=form_one.id,
user_info_values=user_info_values )
self.logout()
self.login( '*****@*****.**' )
user = sa_session.query( galaxy.model.User ) \
.filter( and_( galaxy.model.User.table.c.email=='*****@*****.**' ) ).first()
self.home()
page = "admin/users?id=%s&operation=information&f-deleted=False" % self.security.encode_id( user.id )
self.visit_page( page )
self.check_page_for_string( 'Manage User Information' )
self.check_page_for_string( '*****@*****.**' )
self.check_page_for_string( user_info_values[0] )
self.check_page_for_string( user_info_values[1] )
self.check_page_for_string( '<input type="checkbox" name="field_2" value="true" checked>' )
# lets delete the 'Student' user info form
self.login( '*****@*****.**' )
form_one_latest = get_latest_form(form_one_name)
form_one_latest.current.deleted = True
sa_session.add( form_one_latest.current )
sa_session.flush()
self.home()
self.visit_page('forms/manage?sort=create_time&f-deleted=True')
self.check_page_for_string(form_one_latest.name)
self.logout()
def test_020_create_user_as_admin(self):
''' Testing creating users as an admin '''
self.logout()
self.login('*****@*****.**')
form_one = get_latest_form(form_one_name)
user_info_values = ['Educational', 'Penn State', True]
self.create_user_with_info('*****@*****.**',
'testuser',
'test13',
user_info_forms='single',
user_info_form_id=form_one.id,
user_info_values=user_info_values)
self.logout()
self.login('*****@*****.**')
user = sa_session.query( galaxy.model.User ) \
.filter( and_( galaxy.model.User.table.c.email=='*****@*****.**' ) ).first()
self.home()
page = "admin/users?id=%s&operation=information&f-deleted=False" % self.security.encode_id(
user.id)
self.visit_page(page)
self.check_page_for_string('Manage User Information')
self.check_page_for_string('*****@*****.**')
self.check_page_for_string(user_info_values[0])
self.check_page_for_string(user_info_values[1])
self.check_page_for_string(
'<input type="checkbox" name="field_2" value="true" checked>')
# lets delete the 'Student' user info form
self.login('*****@*****.**')
form_one_latest = get_latest_form(form_one_name)
form_one_latest.current.deleted = True
sa_session.add(form_one_latest.current)
sa_session.flush()
self.home()
self.visit_page('forms/manage?sort=create_time&f-deleted=True')
self.check_page_for_string(form_one_latest.name)
self.logout()
def mark_obj_deleted(obj):
obj.deleted = True
sa_session.add(obj)
sa_session.flush()
def flush(obj):
sa_session.add(obj)
sa_session.flush()
def flush( obj ):
sa_session.add( obj )
sa_session.flush()
def mark_obj_deleted( obj ):
obj.deleted = True
sa_session.add( obj )
sa_session.flush()