Ejemplos de looks_like_a_tool_xml en Python

Ejemplo n.º 1

Archivo: runnable.py Proyecto: natefoo/planemo

def for_path(path):
    """Produce a class:`Runnable` for supplied path."""
    runnable_type = None
    if os.path.isdir(path):
        runnable_type = RunnableType.directory
    elif looks_like_a_tool_cwl(path):
        runnable_type = RunnableType.cwl_tool
    elif looks_like_a_tool_xml(path):
        runnable_type = RunnableType.galaxy_tool
    elif is_a_yaml_with_class(path, ["GalaxyWorkflow"]):
        runnable_type = RunnableType.galaxy_workflow
    elif path.endswith(".ga"):
        runnable_type = RunnableType.galaxy_workflow
    elif looks_like_a_cwl_artifact(path, ["Workflow"]):
        runnable_type = RunnableType.cwl_workflow

    if runnable_type is None:
        error("Unable to determine runnable type for path [%s]" % path)
        raise ExitCodeException(EXIT_CODE_UNKNOWN_FILE_TYPE)

    return Runnable(path, runnable_type)

Ejemplo n.º 2

Archivo: runnable.py Proyecto: pcm32/planemo

def for_path(path):
    """Produce a class:`Runnable` for supplied path."""
    runnable_type = None
    if os.path.isdir(path):
        runnable_type = RunnableType.directory
    elif looks_like_a_tool_cwl(path):
        runnable_type = RunnableType.cwl_tool
    elif looks_like_a_tool_xml(path):
        runnable_type = RunnableType.galaxy_tool
    elif is_a_yaml_with_class(path, ["GalaxyWorkflow"]):
        runnable_type = RunnableType.galaxy_workflow
    elif path.endswith(".ga"):
        runnable_type = RunnableType.galaxy_workflow
    elif looks_like_a_cwl_artifact(path, ["Workflow"]):
        runnable_type = RunnableType.cwl_workflow

    if runnable_type is None:
        error("Unable to determine runnable type for path [%s]" % path)
        raise ExitCodeException(EXIT_CODE_UNKNOWN_FILE_TYPE)

    return Runnable(path, runnable_type)