def match(self, other, matchrad=None, nnearest=0, maxmatches=-1):
if not isinstance(other, (NP.ndarray, Catalog)):
raise TypeError('"other" must be a Nx2 numpy array or an instance of class Catalog.')
if isinstance(other, Catalog):
if (self.epoch == other.epoch) and (self.coords == other.coords):
return GEOM.spherematch(self.location[:,0], self.location[:,1],
other.location[:,0],
other.location[:,1], matchrad,
nnearest, maxmatches)
else:
raise ValueError('epoch and/or sky coordinate type mismatch. Cannot match.')
else:
return GEOM.spherematch(self.location[:,0], self.location[:,1],
other[:,0], other[:,1], matchrad,
nnearest, maxmatches)
def observe(
self, timestamp, Tsys, bandpass, pointing_center, skymodel, tobs, pb_min=0.1, fov_radius=None, lst=None
):
if bandpass.size != self.bp.shape[1]:
raise ValueError("bandpass length does not match.")
self.Tsys = self.Tsys + [Tsys]
self.vis_rms_freq = self.vis_rms_freq + [
2.0 * FCNST.k * Tsys / self.A_eff / self.eff_Q / NP.sqrt(2) / tobs / self.freq_resolution / CNST.Jy
]
self.tobs = self.tobs + [tobs]
self.lst = self.lst + [lst]
if self.timestamp == []:
self.bp = NP.asarray(bandpass).reshape(1, -1)
self.pointing_center = NP.asarray(pointing_center).reshape(1, -1)
else:
self.bp = NP.vstack((self.bp, NP.asarray(bandpass).reshape(1, -1)))
self.pointing_center = NP.vstack((self.pointing_center, NP.asarray(pointing_center).reshape(1, -1)))
pointing_lon = self.pointing_center[-1, 0]
pointing_lat = self.pointing_center[-1, 1]
if self.skycoords == "radec":
if self.pointing_coords == "hadec":
if lst is not None:
pointing_lon = lst - self.pointing_center[-1, 0]
pointing_lat = self.pointing_center[-1, 1]
else:
raise ValueError(
"LST must be provided. Sky coordinates are in RA-Dec format while pointing center is in HA-Dec format."
)
elif self.pointing_coords == "altaz":
pointing_lonlat = lst - GEOM.altaz2hadec(self.pointing_center[-1, :], self.latitude, units="degrees")
pointing_lon = pointing_lonlat[0]
pointing_lat = pointing_lonlat[1]
elif self.skycoords == "hadec":
if self.pointing_coords == "radec":
if lst is not None:
pointing_lon = lst - self.pointing_center[-1, 0]
pointing_lat = self.pointing_center[-1, 1]
else:
raise ValueError(
"LST must be provided. Sky coordinates are in RA-Dec format while pointing center is in HA-Dec format."
)
elif self.pointing_coords == "altaz":
pointing_lonlat = lst - GEOM.altaz2hadec(self.pointing_center[-1, :], self.latitude, units="degrees")
pointing_lon = pointing_lonlat[0]
pointing_lat = pointing_lonlat[1]
else:
if self.pointing_coords == "radec":
if lst is not None:
pointing_lonlat = GEOM.hadec2altaz(
NP.asarray([lst - self.pointing_center[-1, 0], self.pointing_center[-1, 1]]),
self.latitude,
units="degrees",
)
pointing_lon = pointing_lonlat[0]
pointing_lat = pointing_lonlat[1]
else:
raise ValueError(
"LST must be provided. Sky coordinates are in Alt-Az format while pointing center is in RA-Dec format."
)
elif self.pointing_coords == "hadec":
pointing_lonlat = GEOM.hadec2altaz(self.pointing_center, self.latitude, units="degrees")
pointing_lon = pointing_lonlat[0]
pointing_lat = pointing_lonlat[1]
pointing_phase = 0.0
baseline_in_local_frame = self.baseline
if self.baseline_coords == "equatorial":
baseline_in_local_frame = GEOM.xyz2enu(self.baseline, self.latitude, "degrees")
ptmp = self.pointing_center[-1, :] # Convert pointing center to Alt-Az coordinates
if self.pointing_coords == "hadec":
ptmp = GEOM.hadec2altaz(self.pointing_center[-1, :], self.latitude, units="degrees")
elif self.pointing_coords == "radec":
if lst is not None:
ptmp = GEOM.hadec2altaz(
NP.asarray([lst - self.pointing_center[-1, 0], self.pointing_center[-1, 1]]),
self.latitude,
units="degrees",
)
else:
raise ValueError(
"LST must be provided. Sky coordinates are in Alt-Az format while pointing center is in RA-Dec format."
)
ptmp = GEOM.altaz2dircos(ptmp, "degrees") # Convert pointing center to direction cosine coordinates
pointing_phase = (
2.0
* NP.pi
* NP.dot(baseline_in_local_frame.reshape(1, -1), ptmp.reshape(-1, 1))
* self.channels.reshape(1, -1)
/ FCNST.c
)
if fov_radius is None:
fov_radius = 90.0
# PDB.set_trace()
m1, m2, d12 = GEOM.spherematch(
pointing_lon,
pointing_lat,
skymodel.catalog.location[:, 0],
skymodel.catalog.location[:, 1],
fov_radius,
maxmatches=0,
)
# if fov_radius is not None:
# m1, m2, d12 = GEOM.spherematch(pointing_lon, pointing_lat, skymodel.catalog.location[:,0], skymodel.catalog.location[:,1], fov_radius, maxmatches=0)
# else:
# m1 = [0] * skymodel.catalog.location.shape[0]
# m2 = xrange(skymodel.catalog.location.shape[0])
# d12 = GEOM.sphdist(NP.empty(skymodel.catalog.shape[0]).fill(pointing_lon), NP.empty(skymodel.catalog.shape[0]).fill(pointing_lat), skymodel.catalog.location[:,0], skymodel.catalog.location[:,1])
if len(d12) != 0:
pb = NP.empty((len(d12), len(self.channels)))
fluxes = NP.empty((len(d12), len(self.channels)))
coords_str = self.skycoords
if self.skycoords == "radec":
coords_str = "altaz"
source_positions = GEOM.hadec2altaz(
NP.hstack(
(
NP.asarray(lst - skymodel.catalog.location[m2, 0]).reshape(-1, 1),
skymodel.catalog.location[m2, 1].reshape(-1, 1),
)
),
self.latitude,
"degrees",
)
for i in xrange(len(self.channels)):
# pb[:,i] = PB.primary_beam_generator(d12, self.channels[i]/1.0e9, 'degrees', self.telescope)
pb[:, i] = PB.primary_beam_generator(
source_positions, self.channels[i] / 1.0e9, "altaz", self.telescope
)
fluxes[:, i] = (
skymodel.catalog.flux_density[m2]
* (self.channels[i] / skymodel.catalog.frequency) ** skymodel.catalog.spectral_index[m2]
)
geometric_delays = DLY.geometric_delay(
baseline_in_local_frame,
source_positions,
altaz=(coords_str == "altaz"),
hadec=(coords_str == "hadec"),
latitude=self.latitude,
)
self.geometric_delays = self.geometric_delays + [geometric_delays.reshape(len(source_positions))]
phase_matrix = 2.0 * NP.pi * NP.repeat(
geometric_delays.reshape(-1, 1), len(self.channels), axis=1
) * NP.repeat(self.channels.reshape(1, -1), len(d12), axis=0) - NP.repeat(pointing_phase, len(d12), axis=0)
skyvis = NP.sum(
pb
* fluxes
* NP.repeat(NP.asarray(bandpass).reshape(1, -1), len(d12), axis=0)
* NP.exp(-1j * phase_matrix),
axis=0,
)
if fov_radius is not None:
self.obs_catalog_indices = self.obs_catalog_indices + [m2]
# self.obs_catalog = self.obs_catalog + [skymodel.catalog.subset(m2)]
else:
print "No sources found in the catalog within matching radius. Simply populating the observed visibilities with noise."
skyvis = NP.zeros((1, len(self.channels)))
if self.timestamp == []:
self.skyvis_freq = skyvis.reshape(1, -1)
self.vis_noise_freq = self.vis_rms_freq[-1] * (
NP.random.randn(len(self.channels)).reshape(1, -1)
+ 1j * NP.random.randn(len(self.channels)).reshape(1, -1)
)
self.vis_freq = self.skyvis_freq + self.vis_noise_freq
else:
self.skyvis_freq = NP.vstack((self.skyvis_freq, skyvis.reshape(1, -1)))
self.vis_noise_freq = NP.vstack(
(
self.vis_noise_freq,
self.vis_rms_freq[-1]
* (
NP.random.randn(len(self.channels)).reshape(1, -1)
+ 1j * NP.random.randn(len(self.channels)).reshape(1, -1)
),
)
)
self.vis_freq = NP.vstack(
(self.vis_freq, (self.skyvis_freq[-1, :] + self.vis_noise_freq[-1, :]).reshape(1, -1))
)
self.timestamp = self.timestamp + [timestamp]
theta, phi = HP.pix2ang(out_nside,
NP.arange(HP.nside2npix(out_nside)))
if dsm_coord == 'galactic':
gc = SkyCoord(l=NP.degrees(phi),
b=90.0 - NP.degrees(theta),
unit='deg',
frame='galactic')
ec = gc.transform_to('icrs')
echpx = SkyCoord(ra=NP.degrees(phi),
dec=90.0 - NP.degrees(theta),
unit='deg',
frame='icrs')
m1, m2, d12 = GEOM.spherematch(echpx.ra.degree,
echpx.dec.degree,
ec.ra.degree,
ec.dec.degree,
matchrad=NP.degrees(
HP.nside2resol(out_nside)),
nnearest=1,
maxmatches=1)
else:
ec = SkyCoord(ra=NP.degrees(phi),
dec=90.0 - NP.degrees(theta),
unit='deg',
frame='icrs')
gc = ec.transform_to('galactic')
gchpx = SkyCoord(l=NP.degrees(phi),
b=90.0 - NP.degrees(theta),
unit='deg',
frame='galactic')
m1, m2, d12 = GEOM.spherematch(gchpx.l.degree,
gchpx.b.degree,
def match(self, other, matchrad=None, nnearest=0, maxmatches=-1):
"""
-------------------------------------------------------------------------
Match the source positions in an instance of class SkyModel with
another instance of the same class to a specified angular radius using
spherematch() in the geometry module
Inputs:
other [2-column numpy array instance of class SkyModel] Numpy
array with two columns specifying the source positions in
the other sky model or the other instance of class
SkyModel with which the current instance is to be
matched with
matchrad [scalar] Angular radius (in degrees) inside which matching
should occur. If not specified, if maxmatches is positive,
all the nearest maxmatches neighbours are found, and if
maxmatches is not positive, the nnearest-th nearest
neighbour specified by nnearest is found.
maxmatches [scalar] The maximum number of matches (all of the
maxmatches nearest neighbours) that lie within matchrad are
found. If matchrad is not specified, all the maxmatches
nearest neighbours are found. If maxmatches < 0, and matchrad
is not set, then the nnearest-th nearest neighbour is found
(which defaults to the nearest neighbour if nnearest <= 0)
nnearest [scalar] nnearest-th neighbour to be found. Used only when
maxmatches is not positive. If matchrad is set, the
specified neighbour is identified if found inside matchrad,
otherwise the nnearest-th neighbour is identified regardless
of the angular distance.
Outputs:
m1 [list] List of indices of matches in the current instance of
class SkyModel
m2 [list] List of indices of matches in the other instance of
class SkyModel
d12 [list] List of angular distances between the matched subsets
of the two sky models indexed by m1 and m2 respectively
-------------------------------------------------------------------------
"""
if not isinstance(other, (NP.ndarray, SkyModel)):
raise TypeError('"other" must be a Nx2 numpy array or an instance of class SkyModel.')
if isinstance(other, SkyModel):
if (self.epoch == other.epoch) and (self.coords == other.coords):
return GEOM.spherematch(self.location[:,0], self.location[:,1],
other.location[:,0],
other.location[:,1], matchrad,
nnearest, maxmatches)
else:
raise ValueError('epoch and/or sky coordinate type mismatch. Cannot match.')
else:
return GEOM.spherematch(self.location[:,0], self.location[:,1],
other[:,0], other[:,1], matchrad,
nnearest, maxmatches)