def testLoadTrackView_Segments(self):
id, edges, weights = getRandGraphLists(4)
trackData = TrackData({'start' : [10, 210, 260, 410],\
'end' : [20, 240, 310, 710],\
'val' : list(getRandValList(4)),\
'strand' : list(getRandStrandList(4)),\
'id': list(id), \
'edges': list(edges), \
'weights': list(weights), \
'a': ['A', 'B', 'C', 'D'], \
'b': ['1.0', '2.0', '3.0', '4.0'], \
'leftIndex' : [0, 1, 1, 1, 3, 3, 3, 3, 4],\
'rightIndex' : [1, 1, 3, 3, 4, 4, 4, 4, 4]})
self._assertTrackViewLoading_Segments(trackData, [0], 0, 100)
self._assertTrackViewLoading_Segments(trackData, [1, 2], 200, 300)
self._assertTrackViewLoading_Segments(trackData, [0, 1, 2, 3], 0, 900)
self._assertTrackViewLoading_Segments(trackData, [2, 3], 300, 700)
self._assertTrackViewLoading_Segments(trackData, [3], 310, 700)
self._assertTrackViewLoading_Segments(trackData, [2], 300, 410)
self._assertTrackViewLoading_Segments(trackData, [], 310, 410)
self._assertTrackViewLoading_Segments(trackData, [], 0, 0)
self._assertTrackViewLoading_Segments(trackData, [], 300, 300)
self._assertTrackViewLoading_Segments(trackData, [], 400, 400)
def testLoadTrackView_Segments(self):
id, edges, weights = getRandGraphLists(4)
trackData = TrackData({'start' : [10, 210, 260, 410],\
'end' : [20, 240, 310, 710],\
'val' : list(getRandValList(4)),\
'strand' : list(getRandStrandList(4)),\
'id': list(id), \
'edges': list(edges), \
'weights': list(weights), \
'a': ['A', 'B', 'C', 'D'], \
'b': ['1.0', '2.0', '3.0', '4.0'], \
'leftIndex' : [0, 1, 1, 1, 3, 3, 3, 3, 4],\
'rightIndex' : [1, 1, 3, 3, 4, 4, 4, 4, 4]})
self._assertTrackViewLoading_Segments(trackData, [0], 0, 100)
self._assertTrackViewLoading_Segments(trackData, [1, 2], 200, 300)
self._assertTrackViewLoading_Segments(trackData, [0, 1, 2, 3], 0, 900)
self._assertTrackViewLoading_Segments(trackData, [2, 3], 300, 700)
self._assertTrackViewLoading_Segments(trackData, [3], 310, 700)
self._assertTrackViewLoading_Segments(trackData, [2], 300, 410)
self._assertTrackViewLoading_Segments(trackData, [], 310, 410)
self._assertTrackViewLoading_Segments(trackData, [], 0, 0)
self._assertTrackViewLoading_Segments(trackData, [], 300, 300)
self._assertTrackViewLoading_Segments(trackData, [], 400, 400)
def _getTrackData_Numbers(self, size):
id, edges, weights = getRandGraphLists(size, maxNumEdges=10)
return TrackData({'val': list(getRandValList(size)), \
'strand': list(getRandStrandList(size)), \
'id': list(id), \
'edges': list(edges), \
'weights': list(weights), \
'a': [str(x) for x in xrange(size)], \
'b': [str(x) for x in xrange(size, 0, -1)]})
def _getTrackData_Numbers(self, size):
id, edges, weights = getRandGraphLists(size, maxNumEdges=10)
return TrackData({'val': list(getRandValList(size)), \
'strand': list(getRandStrandList(size)), \
'id': list(id), \
'edges': list(edges), \
'weights': list(weights), \
'a': [str(x) for x in xrange(size)], \
'b': [str(x) for x in xrange(size, 0, -1)]})
