def register_plugin():
plugin_path = pkg_resources.resource_filename('ont_fast5_api', 'vbz_plugin')
try:
from h5py import h5pl
h5pl.prepend(bytes(plugin_path, 'UTF-8'))
except ImportError:
# We don't have the plugin library in h5py<2.10 so we fall back on an environment variable
import os
os.environ['HDF5_PLUGIN_PATH'] = plugin_path
return plugin_path
def register_plugin():
plugin_path = pkg_resources.resource_filename('ont_fast5_api',
'vbz_plugin')
try:
from h5py import h5pl
if sys.version_info.major == 2:
# TODO we can remove this when we drop python2 support
h5pl.prepend(bytes(plugin_path))
else:
h5pl.prepend(bytes(plugin_path, 'UTF-8'))
except ImportError:
# We don't have the plugin library in h5py<2.10 so we fall back on an environment variable
import os
os.environ['HDF5_PLUGIN_PATH'] = plugin_path
return plugin_path
def test_prepend(request):
h5pl.prepend(b'/opt/hdf5/vendor-plugin')
assert h5pl.size() == 2
assert h5pl.get(0) == b'/opt/hdf5/vendor-plugin'
assert h5pl.get(1) == b'h5py_plugin_test'