def test_calculate_activity_rate(self):
# Tests for the calculation of the activity rate. At this point
# this is really a circular test - an independent test would be
# helpful in future!
parser0 = ReadStrainCsv(STRAIN_FILE)
self.strain_model = parser0.read_data()
self.model = Shift([5.0])
self.model.calculate_activity_rate(self.strain_model)
expected_rate = np.array([[5.66232696e-14], [5.66232696e-14],
[5.66232696e-14], [5.66232696e-14],
[2.73091764e-12], [2.80389274e-12],
[2.88207458e-12], [6.11293721e-12],
[8.19834427e-12], [6.55082175e-12],
[7.90822653e-11], [7.85391610e-11],
[8.12633607e-11], [7.66785657e-11],
[4.07359524e-11], [2.16914046e-10],
[4.74341943e-10], [1.99907599e-10],
[3.55861556e-11], [1.69536101e-10],
[1.69884622e-10], [1.70233341e-10],
[5.06642764e-10]])
np.testing.assert_array_almost_equal(
np.log10(expected_rate),
np.log10(self.model.strain.seismicity_rate))
def test_check_invalid_longitude(self):
'''
Tests to ensure longitudes greater than 180.0 are returned in the
range (-180. to 180.)
'''
self.model = ReadStrainCsv('some_random_file')
self.model.strain.data = {'longitude': np.array([30., 180., 270.])}
self.model._check_invalid_longitudes()
np.testing.assert_array_almost_equal(
self.model.strain.data['longitude'],
np.array([30., 180., -90.]))
def test_read_file(self):
'''
Tests the reader on a simple strain file
'''
self.model = ReadStrainCsv(IN_FILE)
strain = self.model.read_data()
# First test - check longitude and latitude
exp_longitude = np.array(
[-74.2, -74.1, -74., -73.9, -72.9, -72.8, 46.2, 46.3, 46.4, 176.9,
177., 177.1, -74.1, -74., -73.9, -73.8, -112.2, -112.1, -112.,
-111.9, -111.8])
exp_latitude = np.array(
[-55.7, -55.7, -55.7, -55.7, -55.7, -55.7, -38.2, -38.2, -38.2,
-38.2, -38.2, -38.2, -38.1, -38.1, -38.1,
-38.1, -24.8, -24.8, -24.8, -24.8, -24.8])
region = np.array([b'IPL', b'IPL', b'IPL', b'IPL', b'R', b'R', b'O',
b'O', b'O', b'C', b'C', b'C', b'S', b'S', b'S',
b'S', b'R', b'R', b'R', b'R', b'R'])
str_2nd_inv = np.array(
[0., 0., 0., 0.0, 6.97660913e-07,
4.64676812e-07, 3.51209339e-08, 3.59874978e-08, 3.69339952e-08,
9.96827969e-08, 8.17414827e-08, 5.58344876e-08, 3.42756721e-07,
3.42576969e-07, 3.55996685e-07, 3.35017194e-07, 1.11642096e-06,
2.39838312e-06, 2.73038946e-06, 2.46489650e-06, 1.14653444e-06])
np.testing.assert_array_almost_equal(exp_longitude,
strain.data['longitude'])
np.testing.assert_array_almost_equal(exp_latitude,
strain.data['latitude'])
np.testing.assert_array_equal(region, strain.data['region'])
# Take from 4th value to avoid log10(0.) for IPL regions
np.testing.assert_array_almost_equal(
np.log10(str_2nd_inv[4:]),
np.log10(strain.data['2nd_inv'][4:]))
self.assertListEqual(
strain.data_variables,
['longitude', 'latitude', 'exx', 'eyy', 'exy', '2nd_inv',
'dilatation', 'err', 'e1h', 'e2h'])
def test_check_invalid_longitude(self):
'''
Tests to ensure longitudes greater than 180.0 are returned in the
range (-180. to 180.)
'''
self.model = ReadStrainCsv('some_random_file')
self.model.strain.data = {'longitude': np.array([30., 180., 270.])}
self.model._check_invalid_longitudes()
np.testing.assert_array_almost_equal(
self.model.strain.data['longitude'],
np.array([30., 180., -90.]))
def test_calculate_activity_rate(self):
# Tests for the calculation of the activity rate. At this point
# this is really a circular test - an independent test would be
# helpful in future!
parser0 = ReadStrainCsv(STRAIN_FILE)
self.strain_model = parser0.read_data()
self.model = Shift([5.0])
self.model.calculate_activity_rate(self.strain_model)
expected_rate = np.array([
[5.66232696e-14], [5.66232696e-14],
[5.66232696e-14], [5.66232696e-14], [2.73091764e-12],
[2.80389274e-12], [2.88207458e-12], [6.11293721e-12],
[8.19834427e-12], [6.55082175e-12], [7.90822653e-11],
[7.85391610e-11], [8.12633607e-11], [7.66785657e-11],
[4.07359524e-11], [2.16914046e-10], [4.74341943e-10],
[1.99907599e-10], [3.55861556e-11], [1.69536101e-10],
[1.69884622e-10], [1.70233341e-10], [5.06642764e-10]])
np.testing.assert_array_almost_equal(
np.log10(expected_rate),
np.log10(self.model.strain.seismicity_rate))
def test_read_file(self):
'''
Tests the reader on a simple strain file
'''
self.model = ReadStrainCsv(IN_FILE)
strain =self.model.read_data()
# First test - check longitude and latitude
exp_longitude = np.array([ -74.2, -74.1, -74. , -73.9, -72.9,
-72.8, 46.2, 46.3, 46.4, 176.9, 177. ,177.1, -74.1, -74.,
-73.9, -73.8, -112.2, -112.1, -112. , -111.9, -111.8])
exp_latitude = np.array([-55.7, -55.7, -55.7, -55.7, -55.7, -55.7,
-38.2, -38.2, -38.2, -38.2, -38.2, -38.2, -38.1, -38.1, -38.1,
-38.1, -24.8, -24.8, -24.8, -24.8, -24.8])
region = np.array(['IPL', 'IPL', 'IPL', 'IPL', 'R', 'R', 'O', 'O',
'O', 'C', 'C', 'C', 'S', 'S', 'S', 'S', 'R', 'R',
'R', 'R', 'R'])
str_2nd_inv = np.array([0., 0., 0., 0.0, 6.97660913e-07,
4.64676812e-07, 3.51209339e-08, 3.59874978e-08, 3.69339952e-08,
9.96827969e-08, 8.17414827e-08, 5.58344876e-08, 3.42756721e-07,
3.42576969e-07, 3.55996685e-07, 3.35017194e-07, 1.11642096e-06,
2.39838312e-06, 2.73038946e-06, 2.46489650e-06, 1.14653444e-06])
np.testing.assert_array_almost_equal(exp_longitude,
strain.data['longitude'])
np.testing.assert_array_almost_equal(exp_latitude,
strain.data['latitude'])
np.testing.assert_array_equal(region, strain.data['region'])
#self.assertListEqual(region, strain.data['region'])
# Take from 4th value to avoid log10(0.) for IPL regions
np.testing.assert_array_almost_equal(np.log10(str_2nd_inv[4:]),
np.log10(strain.data['2nd_inv'][4:]))
self.assertListEqual(strain.data_variables,
['longitude', 'latitude', 'exx', 'eyy', 'exy', '2nd_inv',
'dilatation', 'err', 'e1h', 'e2h'])
def test_basic_instantiation(self):
'''
Tests the instantiation of the reader class (trivial)
'''
self.model = ReadStrainCsv('some_random_file')
self.assertEqual(self.model.filename, 'some_random_file')
class TestStrainCsvReader(unittest.TestCase):
'''
Test suite for the strain csv reader
'''
def setUp(self):
'''
'''
self.model = None
self.filename = None
def test_basic_instantiation(self):
'''
Tests the instantiation of the reader class (trivial)
'''
self.model = ReadStrainCsv('some_random_file')
self.assertEqual(self.model.filename, 'some_random_file')
def test_check_invalid_longitude(self):
'''
Tests to ensure longitudes greater than 180.0 are returned in the
range (-180. to 180.)
'''
self.model = ReadStrainCsv('some_random_file')
self.model.strain.data = {'longitude': np.array([30., 180., 270.])}
self.model._check_invalid_longitudes()
np.testing.assert_array_almost_equal(
self.model.strain.data['longitude'],
np.array([30., 180., -90.]))
def test_read_file(self):
'''
Tests the reader on a simple strain file
'''
self.model = ReadStrainCsv(IN_FILE)
strain = self.model.read_data()
# First test - check longitude and latitude
exp_longitude = np.array(
[-74.2, -74.1, -74., -73.9, -72.9, -72.8, 46.2, 46.3, 46.4, 176.9,
177., 177.1, -74.1, -74., -73.9, -73.8, -112.2, -112.1, -112.,
-111.9, -111.8])
exp_latitude = np.array(
[-55.7, -55.7, -55.7, -55.7, -55.7, -55.7, -38.2, -38.2, -38.2,
-38.2, -38.2, -38.2, -38.1, -38.1, -38.1,
-38.1, -24.8, -24.8, -24.8, -24.8, -24.8])
region = np.array([b'IPL', b'IPL', b'IPL', b'IPL', b'R', b'R', b'O',
b'O', b'O', b'C', b'C', b'C', b'S', b'S', b'S',
b'S', b'R', b'R', b'R', b'R', b'R'])
str_2nd_inv = np.array(
[0., 0., 0., 0.0, 6.97660913e-07,
4.64676812e-07, 3.51209339e-08, 3.59874978e-08, 3.69339952e-08,
9.96827969e-08, 8.17414827e-08, 5.58344876e-08, 3.42756721e-07,
3.42576969e-07, 3.55996685e-07, 3.35017194e-07, 1.11642096e-06,
2.39838312e-06, 2.73038946e-06, 2.46489650e-06, 1.14653444e-06])
np.testing.assert_array_almost_equal(exp_longitude,
strain.data['longitude'])
np.testing.assert_array_almost_equal(exp_latitude,
strain.data['latitude'])
np.testing.assert_array_equal(region, strain.data['region'])
# Take from 4th value to avoid log10(0.) for IPL regions
np.testing.assert_array_almost_equal(
np.log10(str_2nd_inv[4:]),
np.log10(strain.data['2nd_inv'][4:]))
self.assertListEqual(
strain.data_variables,
['longitude', 'latitude', 'exx', 'eyy', 'exy', '2nd_inv',
'dilatation', 'err', 'e1h', 'e2h'])
def test_basic_instantiation(self):
'''
Tests the instantiation of the reader class (trivial)
'''
self.model = ReadStrainCsv('some_random_file')
self.assertEqual(self.model.filename, 'some_random_file')
class TestStrainCsvReader(unittest.TestCase):
'''
Test suite for the strain csv reader
'''
def setUp(self):
'''
'''
self.model = None
self.filename = None
def test_basic_instantiation(self):
'''
Tests the instantiation of the reader class (trivial)
'''
self.model = ReadStrainCsv('some_random_file')
self.assertEqual(self.model.filename, 'some_random_file')
def test_check_invalid_longitude(self):
'''
Tests to ensure longitudes greater than 180.0 are returned in the
range (-180. to 180.)
'''
self.model = ReadStrainCsv('some_random_file')
self.model.strain.data = {'longitude': np.array([30., 180., 270.])}
self.model._check_invalid_longitudes()
np.testing.assert_array_almost_equal(
self.model.strain.data['longitude'],
np.array([30., 180., -90.]))
def test_read_file(self):
'''
Tests the reader on a simple strain file
'''
self.model = ReadStrainCsv(IN_FILE)
strain =self.model.read_data()
# First test - check longitude and latitude
exp_longitude = np.array([ -74.2, -74.1, -74. , -73.9, -72.9,
-72.8, 46.2, 46.3, 46.4, 176.9, 177. ,177.1, -74.1, -74.,
-73.9, -73.8, -112.2, -112.1, -112. , -111.9, -111.8])
exp_latitude = np.array([-55.7, -55.7, -55.7, -55.7, -55.7, -55.7,
-38.2, -38.2, -38.2, -38.2, -38.2, -38.2, -38.1, -38.1, -38.1,
-38.1, -24.8, -24.8, -24.8, -24.8, -24.8])
region = np.array(['IPL', 'IPL', 'IPL', 'IPL', 'R', 'R', 'O', 'O',
'O', 'C', 'C', 'C', 'S', 'S', 'S', 'S', 'R', 'R',
'R', 'R', 'R'])
str_2nd_inv = np.array([0., 0., 0., 0.0, 6.97660913e-07,
4.64676812e-07, 3.51209339e-08, 3.59874978e-08, 3.69339952e-08,
9.96827969e-08, 8.17414827e-08, 5.58344876e-08, 3.42756721e-07,
3.42576969e-07, 3.55996685e-07, 3.35017194e-07, 1.11642096e-06,
2.39838312e-06, 2.73038946e-06, 2.46489650e-06, 1.14653444e-06])
np.testing.assert_array_almost_equal(exp_longitude,
strain.data['longitude'])
np.testing.assert_array_almost_equal(exp_latitude,
strain.data['latitude'])
np.testing.assert_array_equal(region, strain.data['region'])
#self.assertListEqual(region, strain.data['region'])
# Take from 4th value to avoid log10(0.) for IPL regions
np.testing.assert_array_almost_equal(np.log10(str_2nd_inv[4:]),
np.log10(strain.data['2nd_inv'][4:]))
self.assertListEqual(strain.data_variables,
['longitude', 'latitude', 'exx', 'eyy', 'exy', '2nd_inv',
'dilatation', 'err', 'e1h', 'e2h'])
