from identity.ecrfs.setup.standard import SEX_MAP_1M2F_GENDER
from identity.setup.participant_identifier_types import ParticipantIdentifierTypeName
from identity.setup.redcap_instances import REDCapInstanceDetail
from identity.setup.studies import StudyName
from identity.ecrfs.setup import crfs, RedCapEcrfDefinition
crfs.extend([
RedCapEcrfDefinition({
'crfs': [
{
'instance': REDCapInstanceDetail.UOL_CRF,
'study': StudyName.Breathe_Deep,
'projects': [43],
},
],
'recruitment_date_column_name':
'consent_date',
'birth_date_column_name':
'dob',
**SEX_MAP_1M2F_GENDER, 'identity_map': {
ParticipantIdentifierTypeName.BREATHE_DEEP_ID: 'record',
}
})
])
from identity.setup.participant_identifier_types import ParticipantIdentifierTypeName
from identity.setup.studies import StudyName
from identity.ecrfs.setup import CiviCrmEcrfDefinition, crfs
crfs.extend([
CiviCrmEcrfDefinition(config={
'crfs': [{
'name': 'OMICS Register',
'case_type_id': 14,
'study': StudyName.OMICS_REGISTER,
'custom_tables': ['civicrm_value_omics_register_20'],
}],
},
id_config={
ParticipantIdentifierTypeName.OMICS_REGISTER_ID:
'omics_id_102',
})
])
from identity.setup.redcap_instances import REDCapInstanceDetail
from identity.setup.studies import StudyName
from identity.ecrfs.setup.standard import SEX_MAP_0F1M_GENDER
from identity.ecrfs.setup import crfs, RedCapEcrfDefinition
crfs.extend([
RedCapEcrfDefinition({
'crfs': [
{
'instance': REDCapInstanceDetail.UHL_LIVE,
'study': StudyName.Pre_Eclampsia,
'projects': [39],
},
],
'recruitment_date_column_name':
'visit_date',
'birth_date_column_name':
'dob',
'withdrawn_from_study_column_name':
'non_complete_rsn',
'withdrawn_from_study_values': ['5'],
**SEX_MAP_0F1M_GENDER, 'complete_or_expected_column_name':
'study_status',
'complete_or_expected_values': ['<isnull>', '1'],
'identity_map': {
ParticipantIdentifierTypeName.PREECLAMPSIA_ID: 'record',
ParticipantIdentifierTypeName.UHL_SYSTEM_NUMBER: 's_number',
}
})
])
from identity.setup.participant_identifier_types import ParticipantIdentifierTypeName
from identity.setup.studies import StudyName
from identity.ecrfs.setup import CiviCrmEcrfDefinition, crfs
crfs.extend([
CiviCrmEcrfDefinition(config={
'crfs': [{
'name': 'GRAPHIC Enrolment',
'case_type_id': 5,
'study': StudyName.GRAPHIC,
'custom_tables': ['civicrm_value_graphic2_9'],
}],
},
id_config={
ParticipantIdentifierTypeName.GRAPHIC_ID:
'graphic_participant_id_26',
ParticipantIdentifierTypeName.GRAPHIC_LAB_ID:
'graphic_lab_id_25',
})
])
from identity.setup.participant_identifier_types import ParticipantIdentifierTypeName
from identity.setup.redcap_instances import REDCapInstanceDetail
from identity.setup.studies import StudyName
from identity.ecrfs.setup.standard import SEX_MAP_0F1M_GENDER
from identity.ecrfs.setup import crfs, RedCapEcrfDefinition
crfs.extend([
RedCapEcrfDefinition({
'crfs': [
{
'instance': REDCapInstanceDetail.UHL_LIVE,
'study': StudyName.DHF,
'projects': [70],
},
],
'recruitment_date_column_name':
'visit_date',
'birth_date_column_name':
'dob',
**SEX_MAP_0F1M_GENDER, 'identity_map': {
ParticipantIdentifierTypeName.DHF_ID: 'record',
}
})
])
crfs.extend([
RedCapEcrfDefinition({
'crfs': [
{
'instance': REDCapInstanceDetail.UOL_CRF,
'study': StudyName.LIMb,
'projects': [31, 32],
},
],
'recruitment_date_column_name':
'pat_consent_date',
**STANDARD_STATUS,
**STANDARD_WITHDRAWAL, 'identity_map': {
ParticipantIdentifierTypeName.LIMB_ID: 'record',
}
}),
RedCapEcrfDefinition({
'crfs': [
{
'instance': REDCapInstanceDetail.UOL_CRF,
'study': StudyName.LIMb,
'projects': [34],
},
],
**STANDARD_DEMOGRAPHICS, 'identity_map': {
ParticipantIdentifierTypeName.LIMB_ID: 'record',
ParticipantIdentifierTypeName.NHS_NUMBER: 'nhs_no',
ParticipantIdentifierTypeName.UHL_SYSTEM_NUMBER: 's_no',
}
}),
RedCapEcrfDefinition({
'crfs': [
{
'instance': REDCapInstanceDetail.UOL_CRF,
'study': StudyName.LIMb,
'projects': [36],
},
],
'recruitment_date_column_name':
'recruited_date',
'birth_date_column_name':
'dob',
**SEX_MAP_0F1M_GENDER, 'identity_map': {
ParticipantIdentifierTypeName.LIMB_ID: 'record',
}
})
])
crfs.extend([
RedCapEcrfDefinition({
'crfs': [
{
'instance': REDCapInstanceDetail.UOL_INTERNET,
'study': StudyName.DESMOND,
'projects': [19],
},
],
'recruitment_date_column_name': 'consent_date',
'first_name_column_name': 'first_name',
'last_name_column_name': 'surname',
'postcode_column_name': 'postcode',
'birth_date_column_name': 'birthdate',
**SEX_MAP_1M2F_GENDER,
'withdrawal_date_column_name': 'wthdrw_date',
'withdrawn_from_study_column_name': 'wthdrw_date',
'withdrawn_from_study_values': ['<isnotnull>'],
'complete_or_expected_column_name': 'withdrawal_date',
'complete_or_expected_values': ['<isnotnull>'],
'post_withdrawal_keep_samples_column_name': 'withdrawal_type',
'post_withdrawal_keep_samples_values': ['<isnull>', '2', '3'],
'post_withdrawal_keep_data_column_name': 'withdrawal_type',
'post_withdrawal_keep_data_values': ['<isnull>', '2', '3'],
'identity_map': {
ParticipantIdentifierTypeName.DESMOND_ID: 'record',
ParticipantIdentifierTypeName.NHS_NUMBER: 'nhs_no',
}
})])
crfs.extend([
RedCapEcrfDefinition({
'crfs': [
{
'instance': REDCapInstanceDetail.UHL_LIVE,
'study': StudyName.FAST,
'projects': [43],
},
],
'recruitment_date_column_name':
'date',
'birth_date_column_name':
'dob',
'withdrawal_date_column_name':
'wthdrwl_date',
'withdrawn_from_study_column_name':
'wthdrwl_date',
'withdrawn_from_study_values': ['<isnotnull>'],
**SEX_MAP_0F1M_GENDER,
**STANDARD_STATUS, 'identity_map': {
ParticipantIdentifierTypeName.FAST_ID: 'record',
ParticipantIdentifierTypeName.NHS_NUMBER: 'nhs_number',
}
}),
RedCapEcrfDefinition({
'crfs': [
{
'instance': REDCapInstanceDetail.UHL_LIVE,
'study': StudyName.FAST,
'projects': [48],
},
],
**STANDARD_DEMOGRAPHICS, 'identity_map': {
ParticipantIdentifierTypeName.FAST_ID: 'record',
ParticipantIdentifierTypeName.NHS_NUMBER: 'nhs_no',
}
})
])
from identity.setup.participant_identifier_types import ParticipantIdentifierTypeName
from identity.setup.redcap_instances import REDCapInstanceDetail
from identity.setup.studies import StudyName
from identity.ecrfs.setup import crfs, RedCapEcrfDefinition
crfs.extend([
RedCapEcrfDefinition({
'crfs': [
{
'instance': REDCapInstanceDetail.UHL_LIVE,
'study': StudyName.EDIFY,
'projects': [30],
},
],
'identity_map': {
ParticipantIdentifierTypeName.EDIFY_ID: 'h1_record_id',
}
})
])
from identity.setup.participant_identifier_types import ParticipantIdentifierTypeName
from identity.setup.redcap_instances import REDCapInstanceDetail
from identity.setup.studies import StudyName
from identity.ecrfs.setup.standard import SEX_MAP_0F1M, STANDARD_STATUS, STANDARD_WITHDRAWAL
from identity.ecrfs.setup import crfs, RedCapEcrfDefinition
crfs.extend([
RedCapEcrfDefinition({
'crfs': [
{
'instance': REDCapInstanceDetail.UHL_LIVE,
'study': StudyName.TMAO,
'projects': [25],
},
],
'birth_date_column_name':
'tmao_dob',
'sex_column_name':
'tmao_gender',
**SEX_MAP_0F1M,
**STANDARD_STATUS,
**STANDARD_WITHDRAWAL, 'identity_map': {
ParticipantIdentifierTypeName.TMAO_ID: 'record',
}
})
])
from identity.ecrfs.setup.standard import SEX_MAP_1M2F_GENDER
from identity.setup.participant_identifier_types import ParticipantIdentifierTypeName
from identity.setup.redcap_instances import REDCapInstanceDetail
from identity.setup.studies import StudyName
from identity.ecrfs.setup import crfs, RedCapEcrfDefinition
crfs.extend([
RedCapEcrfDefinition({
'crfs': [
{
'instance': REDCapInstanceDetail.UOL_INTERNET,
'study': StudyName.Multi_Morbid_Priorities,
'projects': [38],
},
],
**SEX_MAP_1M2F_GENDER, 'identity_map': {
ParticipantIdentifierTypeName.MULTI_MORBID_PRIORITIES_ID: 'record',
}
})
])
crfs.extend([
RedCapEcrfDefinition({
'crfs': [
{
'instance': REDCapInstanceDetail.UHL_LIVE,
'study': StudyName.GENVASC,
'projects': [66],
},
],
'recruitment_date_column_name': 'recruitment_date',
'first_name_column_name': 'first_name',
'last_name_column_name': 'last_name',
'identity_map': {
ParticipantIdentifierTypeName.GENVASC_ID: 'genvasc_id',
ParticipantIdentifierTypeName.UHL_SYSTEM_NUMBER: 'record',
ParticipantIdentifierTypeName.NHS_NUMBER: 'nhs_number',
}
}),
CiviCrmEcrfDefinition(
config={
'crfs': [{
'name': 'GENVASC Enrolments',
'case_type_id': 3,
'study': StudyName.GENVASC,
'custom_tables': ['civicrm_value_genvasc_recruitment_data_5', 'civicrm_value_genvasc_withdrawal_status_8'],
}],
'post_withdrawal_keep_samples_column_name': 'withdrawal_status_24',
'post_withdrawal_keep_samples_values': ['A'],
'post_withdrawal_keep_data_column_name': 'withdrawal_status_24',
'post_withdrawal_keep_samples_values': ['A'],
},
id_config={
ParticipantIdentifierTypeName.GENVASC_ID: 'genvasc_id_10',
})
])
from identity.setup.participant_identifier_types import ParticipantIdentifierTypeName
from identity.setup.redcap_instances import REDCapInstanceDetail
from identity.setup.studies import StudyName
from identity.ecrfs.setup.standard import SEX_MAP_0F1M_SEX
from identity.ecrfs.setup import crfs, RedCapEcrfDefinition
crfs.extend([
RedCapEcrfDefinition({
'crfs': [
{
'instance': REDCapInstanceDetail.UHL_LIVE,
'study': StudyName.Pilot,
'projects': [5],
},
],
'recruitment_date_column_name':
'date_time_of_admission',
**SEX_MAP_0F1M_SEX, 'identity_map': {
ParticipantIdentifierTypeName.PILOT_ID: 'record',
}
})
])
crfs.extend([
RedCapEcrfDefinition({
'crfs': [
{
'instance': REDCapInstanceDetail.UHL_LIVE,
'study': StudyName.DISCORDANCE,
'projects': [84],
},
],
**STANDARD_DEMOGRAPHICS,
'identity_map': {
ParticipantIdentifierTypeName.DISCORDANCE_ID: 'record',
ParticipantIdentifierTypeName.NHS_NUMBER: 'nhs_no',
ParticipantIdentifierTypeName.UHL_SYSTEM_NUMBER: 's_no',
}
}),
RedCapEcrfDefinition({
'crfs': [
{
'instance': REDCapInstanceDetail.UHL_LIVE,
'study': StudyName.DISCORDANCE,
'projects': [85],
},
],
'recruitment_date_column_name': 'baseline_visit_date',
**STANDARD_STATUS,
**STANDARD_WITHDRAWAL,
'excluded_from_analysis_column_name': 'inc_in_eos_analysis',
'excluded_from_analysis_values': ['1'],
'identity_map': {
ParticipantIdentifierTypeName.DISCORDANCE_ID: 'record',
}
})])
from identity.ecrfs.setup.standard import STANDARD_DEMOGRAPHICS
from identity.setup.participant_identifier_types import ParticipantIdentifierTypeName
from identity.setup.redcap_instances import REDCapInstanceDetail
from identity.setup.studies import StudyName
from identity.ecrfs.setup import crfs, RedCapEcrfDefinition
crfs.extend([
RedCapEcrfDefinition({
'crfs': [
{
'instance': REDCapInstanceDetail.UHL_LIVE,
'study': StudyName.CMR_Guide,
'projects': [59],
},
],
**STANDARD_DEMOGRAPHICS, 'identity_map': {
ParticipantIdentifierTypeName.UHL_SYSTEM_NUMBER: 'record',
}
})
])
crfs.extend([
RedCapEcrfDefinition({
'crfs': [
{
'instance': REDCapInstanceDetail.UHL_LIVE,
'study': StudyName.BRICCS,
'projects': [24],
},
{
'instance': REDCapInstanceDetail.UHL_HSCN,
'study': StudyName.BRICCS,
'projects': [13, 14, 15, 16, 17, 18, 19, 25, 26, 27],
},
],
'active': True,
'recruitment_date_column_name': 'int_date',
'first_name_column_name': 'first_name',
'last_name_column_name': 'last_name',
'post_code_column_name': 'address_postcode',
'birth_date_column_name': 'dob',
**SEX_MAP_0F1M_GENDER,
**STANDARD_STATUS,
**STANDARD_WITHDRAWAL,
'identity_map': {
ParticipantIdentifierTypeName.BRICCS_ID: 'record',
ParticipantIdentifierTypeName.NHS_NUMBER: 'nhs_number',
ParticipantIdentifierTypeName.UHL_SYSTEM_NUMBER: 's_number',
},
}),
CiviCrmEcrfDefinition(
config={
'crfs': [{
'name': 'BRICCS CiviCRM',
'case_type_id': 6,
'study': StudyName.BRICCS,
'custom_tables': ['civicrm_value_briccs_recruitment_data_10'],
}],
},
id_config={
ParticipantIdentifierTypeName.BRICCS_ID: 'briccs_id_31',
}),
CustomEcrfDefinition({
'crfs': [
{
'name': 'BRICCS Onyx',
'study': StudyName.BRICCS,
'database_name': 'briccs',
'data_query': """
SELECT
p.id AS record,
p.*,
pav_nhs_number.text_value AS nhs_number,
i2.start_date,
CONVERT(DATE_FORMAT(i2.end_date, '%Y%m%d%H%i%S'), UNSIGNED) last_update_timestamp
FROM participant p
JOIN interview i2
ON i2.participant_id = p.id
LEFT JOIN participant_attribute_value pav_nhs_number
ON pav_nhs_number.participant_id = p.id
AND pav_nhs_number.attribute_name = 'pat_nhsnumber'
;
""",
'most_recent_timestamp_query': """
SELECT CONVERT(DATE_FORMAT(MAX(i2.end_date), '%Y%m%d%H%i%S'), UNSIGNED) latest_timestamp
FROM interview i2
;
""",
'link': ""
},
],
'active': True,
'recruitment_date_column_name': 'start_date',
'first_name_column_name': 'first_name',
'last_name_column_name': 'last_name',
'birth_date_column_name': 'birth_date',
**SEX_MAP_0F1M_GENDER,
**STANDARD_STATUS,
**STANDARD_WITHDRAWAL,
'identity_map': {
ParticipantIdentifierTypeName.BRICCS_ID: 'barcode',
ParticipantIdentifierTypeName.NHS_NUMBER: 'nhs_number',
ParticipantIdentifierTypeName.UHL_SYSTEM_NUMBER: 'enrollment_id',
},
}),
])
from identity.setup.participant_identifier_types import ParticipantIdentifierTypeName
from identity.setup.redcap_instances import REDCapInstanceDetail
from identity.setup.studies import StudyName
from identity.ecrfs.setup.standard import SEX_MAP_0F1M_GENDER
from identity.ecrfs.setup import crfs, RedCapEcrfDefinition
crfs.extend([
RedCapEcrfDefinition({
'crfs': [
{
'instance': REDCapInstanceDetail.UHL_LIVE,
'study': StudyName.GRAPHIC2,
'projects': [20],
},
],
'recruitment_date_column_name':
'date_interview',
'birth_date_column_name':
'dob',
**SEX_MAP_0F1M_GENDER, 'excluded_from_analysis_column_name':
'exclude_from_analysis',
'excluded_from_analysis_values': ['1'],
'identity_map': {
ParticipantIdentifierTypeName.GRAPHIC2_ID: 'record',
}
})
])
crfs.extend([
RedCapEcrfDefinition({
'crfs': [
{
'study': StudyName.ALLEVIATE,
'instance': REDCapInstanceDetail.UHL_LIVE,
'projects': [98],
},
{
'study': StudyName.ALLEVIATE,
'instance': REDCapInstanceDetail.UOL_CRF,
'projects': [45],
},
],
'recruitment_date_column_name':
'consent_date',
'birth_date_column_name':
'dob',
**STANDARD_STATUS,
**STANDARD_WITHDRAWAL,
**SEX_MAP_0F1M_GENDER, 'excluded_from_analysis_column_name':
'inc_in_eos_analysis',
'excluded_from_analysis_values': ['0'],
'identity_map': {
ParticipantIdentifierTypeName.ALLEVIATE_ID: 'record',
}
}),
RedCapEcrfDefinition({
'crfs': [
{
'instance': REDCapInstanceDetail.UOL_CRF,
'study': StudyName.ALLEVIATE,
'projects': [46],
},
],
**STANDARD_DEMOGRAPHICS, 'identity_map': {
ParticipantIdentifierTypeName.ALLEVIATE_ID: 'record',
ParticipantIdentifierTypeName.NHS_NUMBER: 'nhs_no',
ParticipantIdentifierTypeName.UHL_SYSTEM_NUMBER: 's_no',
}
})
])
from identity.setup.participant_identifier_types import ParticipantIdentifierTypeName
from identity.setup.redcap_instances import REDCapInstanceDetail
from identity.setup.studies import StudyName
from identity.ecrfs.setup import crfs, RedCapEcrfDefinition
crfs.extend([
RedCapEcrfDefinition({
'crfs': [
{
'instance': REDCapInstanceDetail.UHL_LIVE,
'study': StudyName.Dal_Gene,
'projects': [47],
},
],
'recruitment_date_column_name':
'date_main_consent',
'first_name_column_name':
'first_name',
'last_name_column_name':
'last_name',
'birth_date_column_name':
'dob',
'identity_map': {
ParticipantIdentifierTypeName.DAL_GENE_ID: 'record',
ParticipantIdentifierTypeName.UHL_SYSTEM_NUMBER: 's_number',
}
})
])
from identity.ecrfs.setup.standard import SEX_MAP_0F1M_GENDER
from identity.ecrfs.setup import crfs, RedCapEcrfDefinition
crfs.extend([
RedCapEcrfDefinition({
'crfs': [
{
'instance': REDCapInstanceDetail.UOL_CRF,
'study': StudyName.MI_ECMO,
'projects': [14],
},
],
'birth_date_column_name':
'dob',
'withdrawal_date_column_name':
'withdrl_date',
'withdrawn_from_study_column_name':
'withdrl_date',
'withdrawn_from_study_values': ['<isnotnull>'],
**SEX_MAP_0F1M_GENDER, 'complete_or_expected_column_name':
'eos_study_comp_yn',
'complete_or_expected_values': ['<isnull>', '1'],
'excluded_from_study_column_name':
'eos_study_not_comp_rsn',
'excluded_from_study_values': ['5'],
'identity_map': {
ParticipantIdentifierTypeName.MI_ECMO_ID: 'record',
}
})
])
from identity.ecrfs.setup.standard import SEX_MAP_1M2F_GENDER
from identity.setup.participant_identifier_types import ParticipantIdentifierTypeName
from identity.setup.redcap_instances import REDCapInstanceDetail
from identity.setup.studies import StudyName
from identity.ecrfs.setup import crfs, RedCapEcrfDefinition
crfs.extend([
RedCapEcrfDefinition({
'crfs': [
{
'instance': REDCapInstanceDetail.UOL_INTERNET,
'study': StudyName.COHERE,
'projects': [22],
},
],
'recruitment_date_column_name':
'assessment_date_bl',
'birth_date_column_name':
'dob',
'withdrawn_from_study_column_name':
'cot_outcome',
'withdrawn_from_study_values': ['2'],
**SEX_MAP_1M2F_GENDER, 'complete_or_expected_column_name':
'cot_outcome',
'complete_or_expected_values': ['<isnull>', '1'],
'identity_map': {
ParticipantIdentifierTypeName.COHERE_ID: 'record',
}
})
])
from identity.setup.participant_identifier_types import ParticipantIdentifierTypeName
from identity.setup.redcap_instances import REDCapInstanceDetail
from identity.setup.studies import StudyName
from identity.ecrfs.setup.standard import SEX_MAP_0F1M_GENDER, STANDARD_STATUS
from identity.ecrfs.setup import crfs, RedCapEcrfDefinition
crfs.extend([
RedCapEcrfDefinition({
'crfs': [
{
'instance': REDCapInstanceDetail.UOL_CRF,
'study': StudyName.COPD_INTROL,
'projects': [41],
},
],
'recruitment_date_column_name':
'consent_date',
'withdrawn_from_study_column_name':
'non_complete_rsn',
'withdrawn_from_study_values':
'5',
**SEX_MAP_0F1M_GENDER,
**STANDARD_STATUS, 'identity_map': {
ParticipantIdentifierTypeName.COPD_INTRO_ID: 'record',
}
})
])
from identity.ecrfs.setup.standard import SEX_MAP_1M2F_SEX
from identity.setup.participant_identifier_types import ParticipantIdentifierTypeName
from identity.setup.redcap_instances import REDCapInstanceDetail
from identity.setup.studies import StudyName
from identity.ecrfs.setup import crfs, RedCapEcrfDefinition
crfs.extend([
RedCapEcrfDefinition({
'crfs': [
{
'instance': REDCapInstanceDetail.UHL_LIVE,
'study': StudyName.CVLPRIT,
'projects': [23],
},
],
**SEX_MAP_1M2F_SEX, 'identity_map': {
ParticipantIdentifierTypeName.CVLPRIT_ID: 'patient_id',
ParticipantIdentifierTypeName.CVLPRIT_LOCAL_ID: 'local_id',
}
})
])
from identity.setup.participant_identifier_types import ParticipantIdentifierTypeName
from identity.setup.redcap_instances import REDCapInstanceDetail
from identity.setup.studies import StudyName
from identity.ecrfs.setup.standard import SEX_MAP_1M2F_GENDER, STANDARD_STATUS, STANDARD_WITHDRAWAL
from identity.ecrfs.setup import crfs, RedCapEcrfDefinition
crfs.extend([
RedCapEcrfDefinition({
'crfs': [
{
'instance': REDCapInstanceDetail.UHL_LIVE,
'study': StudyName.Bioresource,
'projects': [9],
},
],
'recruitment_date_column_name':
'date_of_sig',
'birth_date_column_name':
'date_of_birth',
**SEX_MAP_1M2F_GENDER,
**STANDARD_STATUS,
**STANDARD_WITHDRAWAL, 'identity_map': {
ParticipantIdentifierTypeName.BIORESOURCE_ID: 'record',
}
})
])
from identity.setup.redcap_instances import REDCapInstanceDetail
from identity.setup.studies import StudyName
from identity.ecrfs.setup.standard import SEX_MAP_0F1M_GENDER, STANDARD_WITHDRAWAL
from identity.ecrfs.setup import crfs, RedCapEcrfDefinition
crfs.extend([
RedCapEcrfDefinition({
'crfs': [
{
'instance': REDCapInstanceDetail.UHL_LIVE,
'study': StudyName.LENTEN,
'projects': [56],
},
],
'recruitment_date_column_name': 'v1_visit_date',
'birth_date_column_name': 'dob',
**SEX_MAP_0F1M_GENDER,
'complete_or_expected_column_name': 'study_status',
'complete_or_expected_values': ['1'],
**STANDARD_WITHDRAWAL,
'identity_map': {
ParticipantIdentifierTypeName.LENTEN_ID: 'record',
ParticipantIdentifierTypeName.UHL_SYSTEM_NUMBER: 's_number',
}
})])
from identity.ecrfs.setup.standard import SEX_MAP_1M2F_GENDER
from identity.setup.participant_identifier_types import ParticipantIdentifierTypeName
from identity.setup.redcap_instances import REDCapInstanceDetail
from identity.setup.studies import StudyName
from identity.ecrfs.setup import crfs, RedCapEcrfDefinition
crfs.extend([
RedCapEcrfDefinition({
'crfs': [
{
'instance': REDCapInstanceDetail.UOL_INTERNET,
'study': StudyName.PARC,
'projects': [28],
},
],
'recruitment_date_column_name':
'visit_date',
'birth_date_column_name':
'date_of_birth',
'withdrawn_from_study_column_name':
'outcome_withdrawn_trial',
'withdrawn_from_study_values': ['1'],
**SEX_MAP_1M2F_GENDER, 'complete_or_expected_column_name':
'outcome_completed_trial',
'complete_or_expected_values': ['<isnull>', '1'],
'identity_map': {
ParticipantIdentifierTypeName.PARC_ID: 'record',
}
})
])
from identity.setup.participant_identifier_types import ParticipantIdentifierTypeName
from identity.setup.redcap_instances import REDCapInstanceDetail
from identity.setup.studies import StudyName
from identity.ecrfs.setup.standard import SEX_MAP_0F1M_SEX, STANDARD_STATUS, STANDARD_WITHDRAWAL
from identity.ecrfs.setup import crfs, RedCapEcrfDefinition
crfs.extend([
RedCapEcrfDefinition({
'crfs': [
{
'instance': REDCapInstanceDetail.UOL_CRF,
'study': StudyName.Upfor5,
'projects': [24],
},
],
'recruitment_date_column_name':
'consent_date',
'postcode_column_name':
'postcode',
'birth_date_column_name':
'birth_date',
**SEX_MAP_0F1M_SEX, 'identity_map': {
ParticipantIdentifierTypeName.UPFOR5_ID: 'record',
}
})
])
from identity.ecrfs.setup.standard import SEX_MAP_1M2F_GENDER
from identity.setup.participant_identifier_types import ParticipantIdentifierTypeName
from identity.setup.redcap_instances import REDCapInstanceDetail
from identity.setup.studies import StudyName
from identity.ecrfs.setup import crfs, RedCapEcrfDefinition
crfs.extend([
RedCapEcrfDefinition({
'crfs': [
{
'instance': REDCapInstanceDetail.UOL_INTERNET,
'study': StudyName.HAD,
'projects': [23],
},
],
'recruitment_date_column_name':
'consent_date',
'birth_date_column_name':
'dob',
'withdrawal_date_column_name':
'withdrawal_date',
'withdrawn_from_study_column_name':
'withdrawal_date',
'withdrawn_from_study_values': ['<isnotnull>'],
**SEX_MAP_1M2F_GENDER, 'identity_map': {
ParticipantIdentifierTypeName.HAD_ID: 'record',
}
})
])
from identity.setup.participant_identifier_types import ParticipantIdentifierTypeName
from identity.setup.redcap_instances import REDCapInstanceDetail
from identity.setup.studies import StudyName
from identity.ecrfs.setup.standard import SEX_MAP_0F1M_SEX, STANDARD_STATUS, STANDARD_WITHDRAWAL
from identity.ecrfs.setup import crfs, RedCapEcrfDefinition
crfs.extend([
RedCapEcrfDefinition({
'crfs': [
{
'instance': REDCapInstanceDetail.UHL_LIVE,
'study': StudyName.NON_ADHERENCE,
'projects': [87],
},
],
'recruitment_date_column_name':
'visit_date',
'birth_date_column_name':
'dob',
**SEX_MAP_0F1M_SEX,
**STANDARD_STATUS,
**STANDARD_WITHDRAWAL, 'identity_map': {
ParticipantIdentifierTypeName.NON_ADHERENCE_ID: 'record',
}
})
])
from identity.setup.participant_identifier_types import ParticipantIdentifierTypeName
from identity.setup.redcap_instances import REDCapInstanceDetail
from identity.setup.studies import StudyName
from identity.ecrfs.setup.standard import SEX_MAP_0F1M_GENDER
from identity.ecrfs.setup import crfs, RedCapEcrfDefinition
crfs.extend([
RedCapEcrfDefinition({
'crfs': [
{
'instance': REDCapInstanceDetail.UOL_CRF,
'study': StudyName.VasCeGenS,
'projects': [19],
},
],
**SEX_MAP_0F1M_GENDER, 'identity_map': {
ParticipantIdentifierTypeName.VASCEGENS_ID: 'record',
}
})
])
