#This is a jython script to display image with a lookuptable
import ij.IJ as IJ
from time import sleep
import math
for i in range(0, 100):
if IJ.escapePressed():
break
IJ.beep()
sleep(0.25 * abs(math.sin(i)))
sleep(0.55 * abs(math.exp(-i + 1)))
sleep(0.35 * abs(math.cos(i)))
sleep(0.65 * abs(math.exp(-i + 1)))
rt.setValue(0, row,
"BFE: " + a + "_(obj)" + " vs. " + b + "_(sel)")
rt.show("BFE_Results")
print "renamed elements BFE table"
IJ.selectWindow("BFE_Results")
IJ.saveAs("Text", analysisOut + File.separatorChar + "BFE_results.txt")
rtAP = WM.getWindow("Summary").getTextPanel().getOrCreateResultsTable()
AProw = -1
for ap in abbrv:
for bp in abbrv:
if ap != bp:
AProw = AProw + 1
rtAP.setValue(0, AProw,
"AP: " + ap + "_(obj)" + " vs. " + bp + "_(sel)")
rtAP.show("Summary")
print "renamedelements AP table"
IJ.selectWindow("Summary")
IJ.saveAs("Text", analysisOut + File.separatorChar + "AP.Granule_Results.txt")
print "Saving GRANULE data table finished"
Commands.closeAll()
#rm.reset()
IJ.beep() #specifically for chris
gdp = GenericDialogPlus("Ex Vivo Granule Analysis")
gdp.addMessage("DING!!! DING!!! Analysis Complete!")
gdp.showDialog()
IJ.beep()
