def test_measurement_with_strain_size_1(self):
measurement_intent = MeasurementIntent()
measurement_intent.set_measurement_type(
ip_constants.MEASUREMENT_TYPE_CONDITION_SPACE)
measurement_intent.add_file_type('SPREADSHEET')
strain_name = NamedLink('and_00',
link='www.synbiohub.org/example/strain')
strain = StrainIntent(strain_name)
strain.set_strain_lab_name('my_lab')
strain.set_strain_common_name('my_strain')
measurement_intent.add_strain(strain)
strain_structure_request = {
dc_constants.SBH_URI: 'www.synbiohub.org/example/strain',
dc_constants.LABEL: 'my_strain',
dc_constants.LAB_ID: 'name.my_lab.and_00'
}
self.assertEqual(
{
dc_constants.MEASUREMENT_TYPE:
ip_constants.MEASUREMENT_TYPE_CONDITION_SPACE,
dc_constants.FILE_TYPE: ['SPREADSHEET'],
dc_constants.STRAINS: [strain_structure_request]
}, measurement_intent.to_structured_request())
def test_measurement_with_strain_size_2(self):
measurement_intent = MeasurementIntent()
measurement_intent.set_measurement_type(
ip_constants.MEASUREMENT_TYPE_CONDITION_SPACE)
measurement_intent.add_file_type('SPREADSHEET')
strain_value1 = NamedLink('and_00',
link='www.synbiohub.org/example/and_strain')
strain1 = StrainIntent(strain_value1)
strain1.set_strain_lab_name('my_lab')
strain1.set_strain_common_name('and_strain')
measurement_intent.add_strain(strain1)
strain_value2 = NamedLink('or_gate',
link='www.synbiohub.org/example/or_strain')
strain2 = StrainIntent(strain_value2)
strain2.set_strain_lab_name('my_lab')
strain2.set_strain_common_name('or_strain')
measurement_intent.add_strain(strain2)
strain_structure_request = [{
dc_constants.SBH_URI: 'www.synbiohub.org/example/and_strain',
dc_constants.LABEL: 'and_strain',
dc_constants.LAB_ID: 'name.my_lab.and_00'
}, {
dc_constants.SBH_URI: 'www.synbiohub.org/example/or_strain',
dc_constants.LABEL: 'or_strain',
dc_constants.LAB_ID: 'name.my_lab.or_gate'
}]
self.assertEqual(
{
dc_constants.MEASUREMENT_TYPE:
ip_constants.MEASUREMENT_TYPE_CONDITION_SPACE,
dc_constants.FILE_TYPE: ['SPREADSHEET'],
dc_constants.STRAINS: strain_structure_request
}, measurement_intent.to_structured_request())