def do_upgrade():
"""Implement your upgrades here."""
if not op.has_table('pidSTORE'):
op.create_table(
'pidSTORE',
sa.Column('id', mysql.INTEGER(display_width=15), nullable=False),
sa.Column('pid_type', sa.String(length=6), nullable=False),
sa.Column('pid_value', sa.String(length=255), nullable=False),
sa.Column('pid_provider', sa.String(length=255), nullable=False),
sa.Column('status', sa.CHAR(length=1), nullable=False, index=True),
sa.Column('object_type', sa.String(length=3), nullable=True),
sa.Column('object_value', sa.String(length=255), nullable=True),
sa.Column('created', sa.DateTime(), nullable=False),
sa.Column('last_modified', sa.DateTime(), nullable=False),
sa.PrimaryKeyConstraint('id'),
sa.Index('idx_object', 'object_type', 'object_value', unique=False),
sa.Index('uidx_type_pid', 'pid_type', 'pid_value', unique=True),
)
else:
warnings.warn("*** Creation of 'pidSTORE' table skipped! ***")
if not op.has_table('pidLOG'):
op.create_table(
'pidLOG',
sa.Column('id', mysql.INTEGER(display_width=15), nullable=False),
sa.Column('id_pid', mysql.INTEGER(display_width=15), nullable=True),
sa.Column('timestamp', sa.DateTime(), nullable=False),
sa.Column('action', sa.String(length=10), nullable=False, index=True),
sa.Column('message', sa.Text(), nullable=False),
sa.ForeignKeyConstraint(['id_pid'], ['pidSTORE.id'], ),
sa.PrimaryKeyConstraint('id')
)
else:
warnings.warn("*** Creation of 'pidLOG' table skipped! ***")
def do_upgrade():
""" Implement your upgrades here """
if not op.has_table('remoteACCOUNT'):
op.create_table(
'remoteACCOUNT',
db.Column('id', db.Integer(display_width=15), nullable=False),
db.Column('user_id', db.Integer(display_width=15), nullable=False),
db.Column('client_id', db.String(length=255), nullable=False),
db.Column('extra_data', db.JSON, nullable=True),
db.ForeignKeyConstraint(['user_id'], ['user.id'], ),
db.PrimaryKeyConstraint('id'),
db.UniqueConstraint('user_id', 'client_id'),
mysql_charset='utf8',
mysql_engine='MyISAM'
)
else:
warnings.warn("*** Creation of table 'remoteACCOUNT table skipped!'")
if not op.has_table('remoteTOKEN'):
op.create_table(
'remoteTOKEN',
db.Column('id_remote_account', db.Integer(display_width=15),
nullable=False),
db.Column('token_type', db.String(length=40), nullable=False),
db.Column('access_token', db.Text(), nullable=False),
db.Column('secret', db.Text(), nullable=False),
db.ForeignKeyConstraint(['id_remote_account'],
['remoteACCOUNT.id'], ),
db.PrimaryKeyConstraint('id_remote_account', 'token_type'),
mysql_charset='utf8',
mysql_engine='MyISAM'
)
else:
warnings.warn("*** Creation of table 'remoteTOKEN' skipped!'")
def do_upgrade():
""" Implement your upgrades here """
if not op.has_table('remoteACCOUNT'):
op.create_table(
'remoteACCOUNT',
db.Column('id', db.Integer(display_width=15), nullable=False),
db.Column('user_id', db.Integer(display_width=15), nullable=False),
db.Column('client_id', db.String(length=255), nullable=False),
db.Column('extra_data', db.JSON, nullable=True),
db.ForeignKeyConstraint(['user_id'], ['user.id'], ),
db.PrimaryKeyConstraint('id'),
db.UniqueConstraint('user_id', 'client_id'),
mysql_charset='utf8',
mysql_engine='MyISAM'
)
else:
warnings.warn("*** Creation of table 'remoteACCOUNT table skipped!'")
if not op.has_table('remoteTOKEN'):
op.create_table(
'remoteTOKEN',
db.Column('id_remote_account', db.Integer(display_width=15),
nullable=False),
db.Column('token_type', db.String(length=40), nullable=False),
db.Column('access_token', db.Text(), nullable=False),
db.Column('secret', db.Text(), nullable=False),
db.ForeignKeyConstraint(['id_remote_account'],
['remoteACCOUNT.id'], ),
db.PrimaryKeyConstraint('id_remote_account', 'token_type'),
mysql_charset='utf8',
mysql_engine='MyISAM'
)
else:
warnings.warn("*** Creation of table 'remoteTOKEN' skipped!'")
def do_upgrade():
"""Implement your upgrades here."""
if not op.has_table('oauth2CLIENT'):
op.create_table(
'oauth2CLIENT',
db.Column('name', db.String(length=40), nullable=True),
db.Column('description', db.Text(), nullable=True),
db.Column('website', URLType(), nullable=True),
db.Column('user_id', db.Integer(15, unsigned=True), nullable=True),
db.Column('client_id', db.String(length=255), nullable=False),
db.Column('client_secret', db.String(length=255), nullable=False),
db.Column('is_confidential', db.Boolean(), nullable=True),
db.Column('is_internal', db.Boolean(), nullable=True),
db.Column('_redirect_uris', db.Text(), nullable=True),
db.Column('_default_scopes', db.Text(), nullable=True),
db.ForeignKeyConstraint(['user_id'], ['user.id'], ),
db.PrimaryKeyConstraint('client_id'),
mysql_charset='utf8',
mysql_engine='MyISAM'
)
else:
warnings.warn("*** Creation of table 'oauth2CLIENT' skipped!")
if not op.has_table('oauth2TOKEN'):
op.create_table(
'oauth2TOKEN',
db.Column('id', db.Integer(15, unsigned=True), autoincrement=True,
nullable=False),
db.Column('client_id', db.String(length=40), nullable=False),
db.Column('user_id', db.Integer(15, unsigned=True), nullable=True),
db.Column('token_type', db.String(length=255), nullable=True),
db.Column('access_token', db.String(length=255), nullable=True),
db.Column('refresh_token', db.String(length=255), nullable=True),
db.Column('expires', db.DateTime(), nullable=True),
db.Column('_scopes', db.Text(), nullable=True),
db.Column('is_personal', db.Boolean(), nullable=True),
db.Column('is_internal', db.Boolean(), nullable=True),
db.ForeignKeyConstraint(
['client_id'], ['oauth2CLIENT.client_id'],),
db.ForeignKeyConstraint(['user_id'], ['user.id'], ),
db.PrimaryKeyConstraint('id'),
db.UniqueConstraint('access_token'),
db.UniqueConstraint('refresh_token'),
mysql_charset='utf8',
mysql_engine='MyISAM'
)
else:
warnings.warn("*** Creation of table 'oauth2TOKEN' skipped!")
def estimate():
"""Estimate running time of upgrade in seconds (optional)."""
if op.has_table('remoteTOKEN'):
return run_sql(
"SELECT COUNT(*) AS ids FROM remoteTOKEN"
)[0][0]
return 1
def pre_upgrade():
"""Run pre-upgrade checks (optional)."""
table = "record_json"
if op.has_table(table):
warnings.warn(
"*** Table {0} already exists! *** " "This upgrade will *NOT* create the new table.".format(table)
)
def pre_upgrade():
"""Run pre-upgrade checks (optional)."""
table = "record_json"
if op.has_table(table):
warnings.warn(
"*** Table {0} already exists! *** "
"This upgrade will *NOT* create the new table.".format(table))
def do_upgrade():
""" Implement your upgrades here """
if not op.has_table("oauth2CLIENT"):
op.create_table(
"oauth2CLIENT",
db.Column("name", db.String(length=40), nullable=True),
db.Column("description", db.Text(), nullable=True),
db.Column("website", URLType(), nullable=True),
db.Column("user_id", db.Integer(15, unsigned=True), nullable=True),
db.Column("client_id", db.String(length=255), nullable=False),
db.Column("client_secret", db.String(length=255), nullable=False),
db.Column("is_confidential", db.Boolean(), nullable=True),
db.Column("is_internal", db.Boolean(), nullable=True),
db.Column("_redirect_uris", db.Text(), nullable=True),
db.Column("_default_scopes", db.Text(), nullable=True),
db.ForeignKeyConstraint(["user_id"], ["user.id"]),
db.PrimaryKeyConstraint("client_id"),
mysql_charset="utf8",
mysql_engine="MyISAM",
)
else:
warnings.warn("*** Creation of table 'oauth2CLIENT' skipped!")
if not op.has_table("oauth2TOKEN"):
op.create_table(
"oauth2TOKEN",
db.Column("id", db.Integer(15, unsigned=True), autoincrement=True, nullable=False),
db.Column("client_id", db.String(length=40), nullable=False),
db.Column("user_id", db.Integer(15, unsigned=True), nullable=True),
db.Column("token_type", db.String(length=255), nullable=True),
db.Column("access_token", db.String(length=255), nullable=True),
db.Column("refresh_token", db.String(length=255), nullable=True),
db.Column("expires", db.DateTime(), nullable=True),
db.Column("_scopes", db.Text(), nullable=True),
db.Column("is_personal", db.Boolean(), nullable=True),
db.Column("is_internal", db.Boolean(), nullable=True),
db.ForeignKeyConstraint(["client_id"], ["oauth2CLIENT.client_id"]),
db.ForeignKeyConstraint(["user_id"], ["user.id"]),
db.PrimaryKeyConstraint("id"),
db.UniqueConstraint("access_token"),
db.UniqueConstraint("refresh_token"),
mysql_charset="utf8",
mysql_engine="MyISAM",
)
else:
warnings.warn("*** Creation of table 'oauth2TOKEN' skipped!")
def do_upgrade():
"""Implement your upgrades here."""
if not op.has_table("wtgTAG"):
op.create_table(
'wtgTAG',
sa.Column('id', mysql.INTEGER(display_width=15), nullable=False),
sa.Column('name', sa.String(length=255),
server_default='', nullable=False, index=True),
sa.Column('id_user', mysql.INTEGER(display_width=15),
server_default='0', nullable=True),
sa.Column('user_access_rights', mysql.INTEGER(
display_width=2), nullable=False),
sa.Column('id_usergroup', mysql.INTEGER(
display_width=15), server_default='0', nullable=True),
sa.Column('group_access_rights', mysql.INTEGER(
display_width=2), nullable=False),
sa.Column('public_access_rights', mysql.INTEGER(
display_width=2), nullable=False),
sa.Column('show_in_description', sa.Boolean(), nullable=False),
sa.ForeignKeyConstraint(['id_user'], ['user.id'], ),
sa.ForeignKeyConstraint(['id_usergroup'], ['usergroup.id'], ),
sa.PrimaryKeyConstraint('id'),
mysql_charset='utf8',
mysql_engine='MyISAM'
)
else:
warnings.warn("*** Creation of 'wtgTAG' table skipped! ***")
if not op.has_table("wtgTAG_bibrec"):
op.create_table(
'wtgTAG_bibrec',
sa.Column(
'id_tag', mysql.INTEGER(display_width=15), nullable=False),
sa.Column(
'id_bibrec', mysql.INTEGER(display_width=15), nullable=False),
sa.Column(
'annotation', sa.Text(convert_unicode=True), nullable=True),
sa.Column('date_added', sa.DateTime(), nullable=True),
sa.ForeignKeyConstraint(['id_bibrec'], ['bibrec.id'], ),
sa.ForeignKeyConstraint(['id_tag'], ['wtgTAG.id'], ),
sa.PrimaryKeyConstraint('id_tag', 'id_bibrec'),
mysql_charset='utf8',
mysql_engine='MyISAM'
)
else:
warnings.warn("*** Creation of 'wtgTAG_bibrec' table skipped! ***")
def pre_upgrade():
"""Run pre-upgrade checks (optional)."""
tables = ["wtgTAG", "wtgTAG_bibrec"]
for table in tables:
if op.has_table(table):
warnings.warn(
"*** Table {0} already exists! *** "
"This upgrade will *NOT* create the new table.".format(table))
def pre_upgrade():
"""Run pre-upgrade checks (optional)."""
tables = ["wtgTAG", "wtgTAG_bibrec"]
for table in tables:
if op.has_table(table):
warnings.warn(
"*** Table {0} already exists! *** "
"This upgrade will *NOT* create the new table.".format(table)
)
def pre_upgrade():
"""Run pre-upgrade checks (optional)."""
tables = ["bwlWORKFLOW", "bwlOBJECT", "bwlWORKFLOWLOGGING", "bwlOBJECTLOGGING"]
for table in tables:
if op.has_table(table):
warnings.warn(
"*** Table {0} already exists! *** "
"This upgrade will *NOT* create the new table.".format(table)
)
def clean_sessions():
"""
Deletes expired sessions only.
"""
if op.has_table('session') and not CFG_INSPIRE_SITE:
deleted_sessions = 0
timelimit = convert_datestruct_to_datetext(time.gmtime())
write_message("Deleting expired sessions since %s" % (timelimit, ))
query = "DELETE FROM session WHERE session_expiry < %s"
write_message(query % (timelimit, ), verbose=9)
deleted_sessions += run_sql(query, (timelimit, ))
write_message("Deleted %d sessions" % (deleted_sessions, ))
def do_upgrade():
"""Implement your upgrades here."""
if not op.has_table("record_json"):
op.create_table(
"record_json",
sa.Column("id", db.MediumInteger(8, unsigned=True), nullable=False),
sa.Column("json", db.JSON, nullable=False),
sa.ForeignKeyConstraint(["id"], ["bibrec.id"]),
sa.PrimaryKeyConstraint("id"),
mysql_charset="utf8",
mysql_engine="MyISAM",
)
else:
warnings.warn("*** Creation of 'record_json' table skipped! ***")
def clean_sessions():
"""
Deletes expired sessions only.
"""
if op.has_table('session') and not CFG_INSPIRE_SITE:
deleted_sessions = 0
timelimit = convert_datestruct_to_datetext(time.gmtime())
write_message("Deleting expired sessions since %s" % (timelimit,))
query = "DELETE FROM session WHERE session_expiry < %s"
write_message(query % (timelimit,), verbose=9)
deleted_sessions += run_sql(query, (timelimit,))
write_message("Deleted %d sessions" % (deleted_sessions,))
def do_upgrade():
"""Implement your upgrades here."""
if not op.has_table("record_json"):
op.create_table(
'record_json',
sa.Column('id', db.MediumInteger(8, unsigned=True),
nullable=False),
sa.Column('json', db.JSON, nullable=False),
sa.ForeignKeyConstraint(['id'], ['bibrec.id'], ),
sa.PrimaryKeyConstraint('id'),
mysql_charset='utf8',
mysql_engine='MyISAM'
)
else:
warnings.warn("*** Creation of 'record_json' table skipped! ***")
def do_upgrade():
"""Add the table with facets configuration."""
if not op.has_table('facet_collection'):
op.create_table(
'facet_collection',
db.Column('id', mysql.INTEGER(), nullable=False),
db.Column('id_collection', mysql.INTEGER(), nullable=False),
db.Column('order', mysql.INTEGER(), nullable=False),
db.Column('facet_name', db.String(length=80), nullable=False),
db.ForeignKeyConstraint(['id_collection'], ['collection.id'], ),
db.PrimaryKeyConstraint('id'),
mysql_charset='utf8',
mysql_engine='MyISAM'
)
else:
warnings.warn("*** Creation of table 'facet_collection' skipped!")
def do_upgrade():
"""Implement your upgrades here."""
if not op.has_table("record_json"):
op.create_table('record_json',
sa.Column('id',
db.MediumInteger(8, unsigned=True),
nullable=False),
sa.Column('json', db.JSON, nullable=False),
sa.ForeignKeyConstraint(
['id'],
['bibrec.id'],
),
sa.PrimaryKeyConstraint('id'),
mysql_charset='utf8',
mysql_engine='MyISAM')
else:
warnings.warn("*** Creation of 'record_json' table skipped! ***")
def do_upgrade():
"""Add the table with facets configuration."""
if not op.has_table('facet_collection'):
op.create_table('facet_collection',
db.Column('id', mysql.INTEGER(), nullable=False),
db.Column('id_collection',
mysql.INTEGER(),
nullable=False),
db.Column('order', mysql.INTEGER(), nullable=False),
db.Column('facet_name',
db.String(length=80),
nullable=False),
db.ForeignKeyConstraint(
['id_collection'],
['collection.id'],
),
db.PrimaryKeyConstraint('id'),
mysql_charset='utf8',
mysql_engine='MyISAM')
else:
warnings.warn("*** Creation of table 'facet_collection' skipped!")
def do_upgrade():
"""Implement your upgrades here."""
if not op.has_table('bwlWORKFLOW'):
op.create_table(
'bwlWORKFLOW',
sa.Column('uuid', sa.String(length=36), nullable=False),
sa.Column('name', sa.String(length=255), nullable=False),
sa.Column('created', sa.DateTime(), nullable=False),
sa.Column('modified', sa.DateTime(), nullable=False),
sa.Column('id_user', mysql.INTEGER(), nullable=False),
sa.Column('_extra_data', sa.LargeBinary(), nullable=False),
sa.Column('status', mysql.INTEGER(), nullable=False),
sa.Column(
'current_object', mysql.INTEGER(), nullable=False),
sa.Column(
'counter_initial', mysql.INTEGER(), nullable=False),
sa.Column(
'counter_halted', mysql.INTEGER(), nullable=False),
sa.Column(
'counter_error', mysql.INTEGER(), nullable=False),
sa.Column(
'counter_finished', mysql.INTEGER(), nullable=False),
sa.Column(
'module_name', sa.String(length=64), nullable=False),
sa.PrimaryKeyConstraint('uuid'),
mysql_charset='utf8',
mysql_engine='MyISAM'
)
else:
warnings.warn("*** Creation of 'bwlWORKFLOW' table skipped! ***")
if not op.has_table('bwlOBJECT'):
op.create_table(
'bwlOBJECT',
sa.Column('id', mysql.INTEGER(), nullable=False),
sa.Column('_data', sa.LargeBinary(), nullable=False),
sa.Column('_extra_data', sa.LargeBinary(), nullable=False),
sa.Column(
'id_workflow', sa.String(length=36), nullable=True),
sa.Column(
'version', mysql.INTEGER(display_width=3), nullable=False),
sa.Column('id_parent', mysql.INTEGER(), nullable=True),
sa.Column('created', sa.DateTime(), nullable=False),
sa.Column('modified', sa.DateTime(), nullable=False),
sa.Column('status', sa.String(length=255), nullable=False),
sa.Column(
'data_type', sa.String(length=150), nullable=True),
sa.Column('uri', sa.String(length=500), nullable=True),
sa.Column('id_user', mysql.INTEGER(), nullable=False),
sa.ForeignKeyConstraint(['id_parent'], ['bwlOBJECT.id'], ),
sa.ForeignKeyConstraint(
['id_workflow'], ['bwlWORKFLOW.uuid'], ),
sa.PrimaryKeyConstraint('id'),
mysql_charset='utf8',
mysql_engine='MyISAM'
)
else:
warnings.warn("*** Creation of 'bwlOBJECT' table skipped! ***")
if not op.has_table('bwlWORKFLOWLOGGING'):
op.create_table(
'bwlWORKFLOWLOGGING',
sa.Column('id', mysql.INTEGER(), nullable=False),
sa.Column(
'id_object', sa.String(length=255), nullable=False),
sa.Column('log_type', mysql.INTEGER(), nullable=False),
sa.Column('created', sa.DateTime(), nullable=True),
sa.Column('message', sa.TEXT(), nullable=False),
sa.ForeignKeyConstraint(
['id_object'], ['bwlWORKFLOW.uuid'], ),
sa.PrimaryKeyConstraint('id'),
mysql_charset='utf8',
mysql_engine='MyISAM'
)
else:
warnings.warn("*** Creation of 'bwlWORKFLOWLOGGING' table skipped! ***")
if not op.has_table('bwlOBJECTLOGGING'):
op.create_table(
'bwlOBJECTLOGGING',
sa.Column('id', mysql.INTEGER(), nullable=False),
sa.Column('id_object', mysql.INTEGER(
display_width=255), nullable=False),
sa.Column('log_type', mysql.INTEGER(), nullable=False),
sa.Column('created', sa.DateTime(), nullable=True),
sa.Column('message', sa.TEXT(), nullable=False),
sa.ForeignKeyConstraint(['id_object'], ['bwlOBJECT.id'], ),
sa.PrimaryKeyConstraint('id'),
mysql_charset='utf8',
mysql_engine='MyISAM'
)
else:
warnings.warn("*** Creation of 'bwlOBJECTLOGGING' table skipped! ***")
def do_upgrade():
"""Perfrom upgrade."""
if op.has_table('usergroup'):
op.rename_table(
old_table_name='usergroup',
new_table_name='group'
)
with op.batch_alter_table("group") as batch_op:
batch_op.drop_index('ix_usergroup_name')
batch_op.create_index('ix_group_name', ['name'], unique=True)
batch_op.alter_column('name', server_default=None)
batch_op.add_column(db.Column('is_managed', db.Boolean(),
nullable=False, default=False))
batch_op.alter_column(
column_name='join_policy',
new_column_name='privacy_policy',
type_=db.String(length=1), nullable=False
)
batch_op.drop_index('login_method_name')
batch_op.alter_column(
column_name='login_method',
new_column_name='subscription_policy',
type_=db.String(length=1), nullable=False,
server_default=None
)
batch_op.add_column(db.Column('created', db.DateTime(),
nullable=False, default=datetime.now))
batch_op.add_column(db.Column('modified', db.DateTime(),
nullable=False, default=datetime.now,
onupdate=datetime.now))
else:
op.create_table(
'group',
db.Column('id', db.Integer(15, unsigned=True), nullable=False,
autoincrement=True),
db.Column('name', db.String(length=255), nullable=False,
unique=True, index=True),
db.Column('description', db.Text, nullable=True, default=''),
db.Column('is_managed', db.Boolean(), default=False,
nullable=False),
db.Column('privacy_policy', db.String(length=1), nullable=False),
db.Column('subscription_policy', db.String(length=1),
nullable=False),
db.Column('created', db.DateTime, nullable=False,
default=datetime.now),
db.Column('modified', db.DateTime, nullable=False,
default=datetime.now, onupdate=datetime.now),
db.PrimaryKeyConstraint('id'),
mysql_charset='utf8',
mysql_engine='MyISAM'
)
if op.has_table('user_usergroup'):
op.rename_table(
old_table_name='user_usergroup',
new_table_name='groupMEMBER'
)
with op.batch_alter_table("groupMEMBER") as batch_op:
batch_op.drop_index('id_usergroup')
batch_op.alter_column('id_user', server_default=None)
batch_op.alter_column(
column_name='id_usergroup', new_column_name='id_group',
existing_type=db.Integer(15, unsigned=True),
nullable=False
)
batch_op.create_index('id_group', ['id_group'])
batch_op.alter_column(
column_name='user_status', new_column_name='state',
type_=db.String(length=1), nullable=False
)
batch_op.drop_column('user_status_date')
batch_op.add_column(db.Column('modified', db.DateTime(),
nullable=False, default=datetime.now,
onupdate=datetime.now))
batch_op.add_column(db.Column('created', db.DateTime(),
nullable=False, default=datetime.now))
else:
op.create_table(
'groupMEMBER',
db.Column('id_user', db.Integer(15, unsigned=True),
nullable=False),
db.Column('id_group', db.Integer(15, unsigned=True)),
db.Column('state', db.String(length=1), nullable=False),
db.Column('created', db.DateTime(), nullable=False,
default=datetime.now),
db.Column('modified', db.DateTime(), nullable=False,
default=datetime.now, onupdate=datetime.now),
db.ForeignKeyConstraint(['id_group'], [u'group.id'], ),
db.ForeignKeyConstraint(['id_user'], [u'user.id'], ),
db.PrimaryKeyConstraint('id_user', 'id_group'),
mysql_charset='utf8',
mysql_engine='MyISAM'
)
op.create_table(
'groupADMIN',
db.Column('id', db.Integer(15, unsigned=True), nullable=False,
autoincrement=True),
db.Column('group_id', db.Integer(15, unsigned=True)),
db.Column('admin_type', db.Unicode(255)),
db.Column('admin_id', db.Integer),
db.ForeignKeyConstraint(['group_id'], [u'group.id'], ),
db.PrimaryKeyConstraint('id', 'group_id'),
mysql_charset='utf8',
mysql_engine='MyISAM'
)
def do_upgrade():
"""Implement your upgrades here."""
if not op.has_table('bwlWORKFLOW'):
op.create_table(
'bwlWORKFLOW',
sa.Column('uuid', sa.String(length=36), nullable=False),
sa.Column('name', sa.String(length=255), nullable=False),
sa.Column('created', sa.DateTime(), nullable=False),
sa.Column('modified', sa.DateTime(), nullable=False),
sa.Column('id_user', mysql.INTEGER(), nullable=False),
sa.Column('_extra_data', sa.LargeBinary(), nullable=False),
sa.Column('status', mysql.INTEGER(), nullable=False),
sa.Column(
'current_object', mysql.INTEGER(), nullable=False),
sa.Column(
'counter_initial', mysql.INTEGER(), nullable=False),
sa.Column(
'counter_halted', mysql.INTEGER(), nullable=False),
sa.Column(
'counter_error', mysql.INTEGER(), nullable=False),
sa.Column(
'counter_finished', mysql.INTEGER(), nullable=False),
sa.Column(
'module_name', sa.String(length=64), nullable=False),
sa.PrimaryKeyConstraint('uuid'),
mysql_charset='utf8',
mysql_engine='MyISAM'
)
else:
warnings.warn("*** Creation of 'bwlWORKFLOW' table skipped! ***")
if not op.has_table('bwlOBJECT'):
op.create_table(
'bwlOBJECT',
sa.Column('id', mysql.INTEGER(), nullable=False),
sa.Column('_data', sa.LargeBinary(), nullable=False),
sa.Column('_extra_data', sa.LargeBinary(), nullable=False),
sa.Column(
'id_workflow', sa.String(length=36), nullable=True),
sa.Column(
'version', mysql.INTEGER(display_width=3), nullable=False),
sa.Column('id_parent', mysql.INTEGER(), nullable=True),
sa.Column('created', sa.DateTime(), nullable=False),
sa.Column('modified', sa.DateTime(), nullable=False),
sa.Column('status', sa.String(length=255), nullable=False),
sa.Column(
'data_type', sa.String(length=150), nullable=True),
sa.Column('uri', sa.String(length=500), nullable=True),
sa.Column('id_user', mysql.INTEGER(), nullable=False),
sa.ForeignKeyConstraint(['id_parent'], ['bwlOBJECT.id'], ),
sa.ForeignKeyConstraint(
['id_workflow'], ['bwlWORKFLOW.uuid'], ),
sa.PrimaryKeyConstraint('id'),
mysql_charset='utf8',
mysql_engine='MyISAM'
)
else:
warnings.warn("*** Creation of 'bwlOBJECT' table skipped! ***")
if not op.has_table('bwlWORKFLOWLOGGING'):
op.create_table(
'bwlWORKFLOWLOGGING',
sa.Column('id', mysql.INTEGER(), nullable=False),
sa.Column(
'id_object', sa.String(length=255), nullable=False),
sa.Column('log_type', mysql.INTEGER(), nullable=False),
sa.Column('created', sa.DateTime(), nullable=True),
sa.Column('message', sa.TEXT(), nullable=False),
sa.ForeignKeyConstraint(
['id_object'], ['bwlWORKFLOW.uuid'], ),
sa.PrimaryKeyConstraint('id'),
mysql_charset='utf8',
mysql_engine='MyISAM'
)
else:
warnings.warn(
"*** Creation of 'bwlWORKFLOWLOGGING' table skipped! ***")
if not op.has_table('bwlOBJECTLOGGING'):
op.create_table(
'bwlOBJECTLOGGING',
sa.Column('id', mysql.INTEGER(), nullable=False),
sa.Column('id_object', mysql.INTEGER(
display_width=255), nullable=False),
sa.Column('log_type', mysql.INTEGER(), nullable=False),
sa.Column('created', sa.DateTime(), nullable=True),
sa.Column('message', sa.TEXT(), nullable=False),
sa.ForeignKeyConstraint(['id_object'], ['bwlOBJECT.id'], ),
sa.PrimaryKeyConstraint('id'),
mysql_charset='utf8',
mysql_engine='MyISAM'
)
else:
warnings.warn("*** Creation of 'bwlOBJECTLOGGING' table skipped! ***")
def do_upgrade():
"""Implement your upgrades here."""
if not op.has_table("audit_logging"):
Audit.__table__.create(db.engine)
def estimate():
"""Estimate running time of upgrade in seconds (optional)."""
if op.has_table('oauth2TOKEN'):
return run_sql("SELECT COUNT(id) AS ids FROM oauth2TOKEN")[0][0]
return 1
def do_upgrade():
"""Implement your upgrades here."""
if not op.has_table("wtgTAG"):
op.create_table('wtgTAG',
sa.Column('id',
mysql.INTEGER(display_width=15),
nullable=False),
sa.Column('name',
sa.String(length=255),
server_default='',
nullable=False,
index=True),
sa.Column('id_user',
mysql.INTEGER(display_width=15),
server_default='0',
nullable=True),
sa.Column('user_access_rights',
mysql.INTEGER(display_width=2),
nullable=False),
sa.Column('id_usergroup',
mysql.INTEGER(display_width=15),
server_default='0',
nullable=True),
sa.Column('group_access_rights',
mysql.INTEGER(display_width=2),
nullable=False),
sa.Column('public_access_rights',
mysql.INTEGER(display_width=2),
nullable=False),
sa.Column('show_in_description',
sa.Boolean(),
nullable=False),
sa.ForeignKeyConstraint(
['id_user'],
['user.id'],
),
sa.ForeignKeyConstraint(
['id_usergroup'],
['usergroup.id'],
),
sa.PrimaryKeyConstraint('id'),
mysql_charset='utf8',
mysql_engine='MyISAM')
else:
warnings.warn("*** Creation of 'wtgTAG' table skipped! ***")
if not op.has_table("wtgTAG_bibrec"):
op.create_table('wtgTAG_bibrec',
sa.Column('id_tag',
mysql.INTEGER(display_width=15),
nullable=False),
sa.Column('id_bibrec',
mysql.INTEGER(display_width=15),
nullable=False),
sa.Column('annotation',
sa.Text(convert_unicode=True),
nullable=True),
sa.Column('date_added', sa.DateTime(), nullable=True),
sa.ForeignKeyConstraint(
['id_bibrec'],
['bibrec.id'],
),
sa.ForeignKeyConstraint(
['id_tag'],
['wtgTAG.id'],
),
sa.PrimaryKeyConstraint('id_tag', 'id_bibrec'),
mysql_charset='utf8',
mysql_engine='MyISAM')
else:
warnings.warn("*** Creation of 'wtgTAG_bibrec' table skipped! ***")