def test_detx_format_comments(self):
det = Detector(filename=data_path("detx/detx_v1.detx"))
assert len(det.comments) == 0
det = Detector(filename=data_path("detx/detx_v2.detx"))
assert len(det.comments) == 0
det = Detector(filename=data_path("detx/detx_v3.detx"))
assert len(det.comments) == 2
assert " a comment line" == det.comments[0]
assert " another comment line starting with '#'" == det.comments[1]
def test_detx_v5(self):
det = Detector(filename=data_path("detx/detx_v5.detx"))
assert np.allclose([464.4, 564.7, 190.583],
det.dom_positions[808956908],
atol=1e-2)
assert np.allclose([464.4, 564.7, 95.389],
det.dom_positions[808981864],
atol=1e-2)
assert det.n_doms == 114
assert det.det_id == 49
assert det.n_pmts_per_dom == 31
assert det.n_dus == 6
assert np.allclose(
det.doms[808981864],
[
1.0000000e01,
8.0000000e00,
3.1000000e01,
4.6440000e02,
5.6470000e02,
9.5389000e01,
9.9995400e-01,
-7.8470000e-03,
3.9110000e-03,
4.0080000e-03,
0.0000000e00,
3.7861343e04,
],
atol=1e-2,
)
assert np.allclose(
np.array([
[484.6, 564.65],
[464.4, 564.7],
[442.5, 567.45],
[474.15, 583.45],
[454.2, 583.0],
[431.1, 583.5],
]),
det.xy_positions,
)
assert np.allclose(
[
3,
0.73205,
0.614161,
0.29479,
808981864,
10,
8,
13367,
464.546,
564.823,
95.448,
0,
207862.961,
],
list(det.get_pmt(808981864, 3)),
)
def test_detx_format_version_1(self):
det = Detector(filename=data_path("detx/detx_v1.detx"))
assert 2 == det.n_dus
assert 6 == det.n_doms
assert 3 == det.n_pmts_per_dom
assert 1 == det.version
self.assertListEqual([1.1, 1.2, 1.3], list(det.pmts.pos[0]))
self.assertListEqual([3.4, 3.5, 3.6], list(det.pmts.pos[7]))
self.assertListEqual([23.4, 23.5, 23.6], list(det.pmts.pos[16]))
def configure(self):
self._should_apply = self.get("apply", default=True)
self.filename = self.get("filename")
self.det_id = self.get("det_id")
self.run = self.get("run")
self.t0set = self.get("t0set")
self.calibset = self.get("calibset")
self.detector = self.get("detector")
self.key = self.get("key", default="Hits")
self.outkey = self.get("outkey", default="CalibHits")
self.key_mc = self.get("key_mc", default="McHits")
self.outkey_mc = self.get("outkey_mc", default="CalibMcHits")
self._pos_dom_channel = None
self._dir_dom_channel = None
self._t0_dom_channel = None
self._pos_pmt_id = None
self._dir_pmt_id = None
self._t0_pmt_id = None
self._lookup_tables = None # for Numba
if self.det_id and self.run:
self.cprint(
"Grabbing the calibration for Det ID {} and run {}".format(
self.det_id, self.run))
raw_detx = km3db.tools.detx_for_run(self.det_id, self.run)
self.detector = Detector(string=raw_detx)
self._create_dom_channel_lookup()
self._create_pmt_id_lookup()
return
if self.filename or self.det_id:
if self.filename is not None:
self.detector = Detector(filename=self.filename)
if self.det_id:
self.detector = Detector(det_id=self.det_id,
t0set=self.t0set,
calibset=self.calibset)
if self.detector is not None:
self.log.debug("Creating lookup tables")
self._create_dom_channel_lookup()
self._create_pmt_id_lookup()
else:
self.log.critical("No detector information loaded.")
def test_jdetectordb_output_with_detx_v3(self):
det = Detector(
data_path(
"detx/D_ORCA006_t.A02181836.p.A02181837.r.A02182001.detx"))
assert det.utm_info is not None
assert det.utm_info.ellipsoid == "WGS84"
assert det.utm_info.grid == "32N"
assert det.utm_info.easting == 256500.0
assert det.utm_info.northing == 4743000.0
assert det.utm_info.z == -2440.0
def test_detx_v4(self):
det = Detector(filename=data_path("detx/detx_v4.detx"))
assert np.allclose([119.6, -12.2, 192.77],
det.dom_positions[808956908],
atol=1e-2)
assert np.allclose([119.6, -12.2, 97.44],
det.dom_positions[808981864],
atol=1e-2)
assert det.n_doms == 90
assert det.det_id == 44
assert det.n_pmts_per_dom == 31
assert det.n_dus == 5
assert np.allclose(
det.doms[808945480],
[
1,
5,
31,
86.500,
9.100,
66.821,
1.000000,
0.000000,
0.000000,
0.000000,
0.000,
],
atol=1e-2,
)
assert np.allclose(
np.array([[86.5, 9.1], [86.6, 6.6], [109.6, 5.9], [97.8, -9.6],
[119.6, -12.2]]),
det.xy_positions,
)
assert np.allclose(
[
3,
0.844,
0.449,
0.295,
808981864,
5,
8,
13367,
119.768,
-12.11,
97.5,
0,
207863.242,
],
list(det.get_pmt(808981864, 3)),
)
def test_dom_table_with_another_detx(self):
det = Detector()
det._det_file = EXAMPLE_DETX_RADIAL
det._parse()
dt = det.dom_table
assert 4 == len(dt)
assert np.allclose([1, 2, 3, 4], dt.dom_id)
assert np.allclose([1, 1, 1, 2], dt.du)
assert np.allclose([1, 2, 3, 1], dt.floor)
assert np.allclose([0, 0, 0, 0], dt.pos_x)
assert np.allclose([0, 0, 0, 0], dt.pos_y)
assert np.allclose([0, 0, 0, 0], dt.pos_z)
def test_rotate_dom_set_by_step_by_360_degrees(self):
det = Detector()
det._det_file = EXAMPLE_DETX_RADIAL
det._parse()
dom_id = 1
channel_id = 0
pmt_dir = det.pmts[det.pmts.dom_id == dom_id].dir[channel_id].copy()
pmt_pos = det.pmts[det.pmts.dom_id == dom_id].pos[channel_id].copy()
for i in range(36):
det.rotate_dom_by_yaw(dom_id, 10)
pmt_dir_rot = det.pmts[det.pmts.dom_id == dom_id].dir[channel_id]
assert np.allclose(pmt_dir, pmt_dir_rot)
pmt_pos_rot = det.pmts[det.pmts.dom_id == dom_id].pos[channel_id]
assert np.allclose(pmt_pos, pmt_pos_rot)
def setUp(self):
self.track = {
"pos_x": 1.7524502152598151,
"pos_y": 39.06202405657308,
"pos_z": 130.44049806891948,
"dir_x": 0.028617421257374293,
"dir_y": -0.489704257367248,
"dir_z": -0.8714188335794505,
}
self.det = Detector(data_path("detx/detx_v3.detx"))
pd = km3pipe.extras.pandas()
self.DU = pd.DataFrame(self.det.dom_table).mean()
def test_detx_format_version_3_with_whitespace(self):
det = Detector(filename=data_path("detx/detx_v3_whitespace.detx"))
assert 2 == det.n_dus
assert 6 == det.n_doms
assert 3 == det.n_pmts_per_dom
assert 256500.0 == det.utm_info.easting
assert 4743000.0 == det.utm_info.northing
assert "WGS84" == det.utm_info.ellipsoid
assert "32N" == det.utm_info.grid
assert -2425.0 == det.utm_info.z
assert 1500000000.1 == det.valid_from
assert 9999999999.0 == det.valid_until
assert 3 == det.version
self.assertListEqual([1.1, 1.2, 1.3], list(det.pmts.pos[0]))
self.assertListEqual([3.4, 3.5, 3.6], list(det.pmts.pos[7]))
self.assertListEqual([23.4, 23.5, 23.6], list(det.pmts.pos[16]))
def test_rotate_du_by_yaw_step_by_step_360_degrees(self):
det = Detector()
det._det_file = EXAMPLE_DETX_RADIAL
det._parse()
du = 2
pmt_dir = det.pmts[det.pmts.du == du].dir.copy()
pmt_pos = det.pmts[det.pmts.du == du].pos.copy()
pmt_dir_other_dus = det.pmts[det.pmts.du != du].dir.copy()
pmt_pos_other_dus = det.pmts[det.pmts.du != du].pos.copy()
for i in range(36):
det.rotate_du_by_yaw(du, 10)
pmt_dir_rot = det.pmts[det.pmts.du == du].dir
pmt_pos_rot = det.pmts[det.pmts.du == du].pos
assert np.allclose(pmt_dir, pmt_dir_rot)
assert np.allclose(pmt_pos, pmt_pos_rot)
assert np.allclose(pmt_dir_other_dus, det.pmts[det.pmts.du != du].dir)
assert np.allclose(pmt_pos_other_dus, det.pmts[det.pmts.du != du].pos)
def test_rotate_dom_by_yaw(self):
det = Detector()
det._det_file = EXAMPLE_DETX_RADIAL
det._parse()
# here, only one PMT is checked
dom_id = 1
heading = 23
channel_id = 0
pmt_dir = det.pmts[det.pmts.dom_id == dom_id].dir[channel_id].copy()
pmt_dir_rot = qrot_yaw(pmt_dir, heading)
det.rotate_dom_by_yaw(dom_id, heading)
assert np.allclose(pmt_dir_rot,
det.pmts[det.pmts.dom_id == dom_id].dir[channel_id])
assert np.allclose(
[0.92050485, 0.39073113, 0],
det.pmts[det.pmts.dom_id == dom_id].pos[channel_id],
)
def test_init_from_string(self):
detx_string = "\n".join((
"1 3",
"8 1 1 3",
" 1 1.1 1.2 1.3 1.1 2.1 3.1 10.0",
" 2 1.4 1.5 1.6 4.1 5.1 6.1 20.0",
" 3 1.7 1.8 1.9 7.1 8.1 9.1 30.0",
"4 1 2 3",
" 4 2.1 2.2 2.3 1.2 2.2 3.2 40.0",
" 5 2.4 2.5 2.6 4.2 5.2 6.2 50.0",
" 6 2.7 2.8 2.9 7.2 8.2 9.2 60.0",
"9 1 3 3",
" 7 3.1 3.2 3.3 1.3 2.3 3.3 70.0",
" 8 3.4 3.5 3.6 4.3 5.3 6.3 80.0",
" 9 3.7 3.8 3.9 7.3 8.3 9.3 90.0\n",
))
det = Detector(string=detx_string)
assert 1 == det.n_dus
assert 3 == det.n_doms
def test_ascii_with_mixed_dom_ids(self):
detx_string = "\n".join((
"1 3",
"8 1 1 3",
" 1 1.1 1.2 1.3 1.1 2.1 3.1 10.0",
" 2 1.4 1.5 1.6 4.1 5.1 6.1 20.0",
" 3 1.7 1.8 1.9 7.1 8.1 9.1 30.0",
"4 1 2 3",
" 4 2.1 2.2 2.3 1.2 2.2 3.2 40.0",
" 5 2.4 2.5 2.6 4.2 5.2 6.2 50.0",
" 6 2.7 2.8 2.9 7.2 8.2 9.2 60.0",
"9 1 3 3",
" 7 3.1 3.2 3.3 1.3 2.3 3.3 70.0",
" 8 3.4 3.5 3.6 4.3 5.3 6.3 80.0",
" 9 3.7 3.8 3.9 7.3 8.3 9.3 90.0\n",
))
detx_fobj = StringIO(detx_string)
self.det = Detector()
self.det._det_file = detx_fobj
self.det._parse()
assert detx_string == self.det.ascii
def test_center_of_mass(self):
det = Detector()
det._det_file = EXAMPLE_DETX
det._parse()
assert np.allclose([2.4, 2.5, 2.6], det.com)
import numpy as np
from scipy.spatial import ConvexHull
import matplotlib.pyplot as plt
from mpl_toolkits.mplot3d import Axes3D # noqa
from km3net_testdata import data_path
from km3pipe.hardware import Detector
from km3pipe.math import Polygon
import km3pipe.style
km3pipe.style.use("km3pipe")
detx = data_path(
"detx/orca_115strings_av23min20mhorizontal_18OMs_alt9mvertical_v1.detx")
detector = Detector(detx)
xy = detector.xy_positions
hull = ConvexHull(xy)
##############################################################################
# Plot it:
plt.plot(xy[:, 0], xy[:, 1], "o")
for simplex in hull.simplices:
plt.plot(xy[simplex, 0], xy[simplex, 1], "k-")
##############################################################################
# We could also have directly used the vertices of the hull, which
# for 2-D are guaranteed to be in counterclockwise order:
plt.plot(xy[hull.vertices, 0], xy[hull.vertices, 1], "r--", lw=2)
def setUp(self):
self.det = Detector()
self.det._det_file = EXAMPLE_DETX
def test_center_of_mass_with_another_detx(self):
det = Detector()
det._det_file = EXAMPLE_DETX_RADIAL
det._parse()
assert np.allclose([-0.2, 0.0, 0.2], det.com)
def test_detector_repr(self):
det = Detector(filename=data_path("detx/detx_v3.detx"))
assert "Detector id: '23', n_doms: 6, dus: [1, 2]" == repr(det)
def test_comments_are_written(self):
det = Detector(filename=data_path("detx/detx_v3.detx"))
det.add_comment("foo")
assert 3 == len(det.comments)
assert det.comments[2] == "foo"
assert "# foo" == det.ascii.splitlines()[2]
def test_detx_v3_is_the_same_ascii(self):
det = Detector(filename=data_path("detx/detx_v3.detx"))
with open(data_path("detx/detx_v3.detx"), "r") as fobj:
assert fobj.read() == det.ascii
def test_init_with_detector(self):
det = Detector(data_path("detx/detx_v1.detx"))
Calibration(detector=det)
import pandas as pd
import numpy as np
from km3pipe import Pipeline, Module
from km3pipe.hardware import Detector
from km3pipe.io import CHPump
from km3pipe.io.daq import DAQPreamble, DAQSummaryslice, DAQEvent
from km3pipe.time import tai_timestamp
import km3pipe.style
km3pipe.style.use('km3pipe')
PLOTS_PATH = '/home/km3net/monitoring/www/plots'
N_DOMS = 18
N_DUS = 2
detector = Detector(det_id=14)
xfmt = md.DateFormatter('%Y-%m-%d %H:%M')
lock = threading.Lock()
class DOMHits(Module):
def configure(self):
self.run = True
self.max_events = 1000
self.hits = deque(maxlen=1000)
self.triggered_hits = deque(maxlen=1000)
self.thread = threading.Thread(target=self.plot).start()
def process(self, blob):
tag = str(blob['CHPrefix'].tag)
