def _deploy_make(self, setup_dir):
rc = util.make(self.name, setup_dir, self.make_opts)
if rc != 0:
self.log.error('Problem making %s.' % self.name)
return 1
else:
self.log.info('Successfully made %s.' % self.name)
return self._copy_dir(setup_dir)
def _deploy_make(self, setup_dir):
rc = util.make(self.name, setup_dir, self.make_opts)
if rc != 0:
self.log.error('Problem making %s.' % self.name)
return 1
else:
self.log.info('Successfully made %s.' % self.name)
return self._copy_dir(setup_dir)
def deploy_pyronoise(app, setup_dir):
srcDir = os.path.join(setup_dir, 'FDist')
rc = util.make('pyronoise2/FDist', srcDir)
if rc != 0:
return rc
srcDir = os.path.join(setup_dir, 'FastaUnique')
rc = util.make('pyronoise2/FastaUnique', srcDir)
if rc != 0:
return rc
srcDir = os.path.join(setup_dir, 'NDist')
rc = util.make('pyronoise2/NDist', srcDir)
if rc != 0:
return rc
srcDir = os.path.join(setup_dir, 'PCluster')
rc = util.make('pyronoise2/PCluster', srcDir)
if rc != 0:
return rc
srcDir = os.path.join(setup_dir, 'QCluster')
rc = util.make('pyronoise2/QCluster', srcDir)
if rc != 0:
return rc
os.rmdir(app.deploy_dir)
return util.copytree(setup_dir, app.deploy_dir)
