def process_cells(self):
"""Process the list of computed cells to identify the different regions
of each cell and computes the stats related to the fluorescence"""
self.cell_manager.process_cells(self.parameters.cellprocessingparams,
self.image_manager)
self.linescan_manager = LineScanManager()
print "Processing Cells Finished"
def process_cells(self):
"""Process the list of computed cells to identify the different regions
of each cell and computes the stats related to the fluorescence"""
self.cell_manager.process_cells(self.parameters.cellprocessingparams,
self.image_manager)
self.linescan_manager = LineScanManager()
if self.parameters.cellprocessingparams.classify_cells:
self.compute_cellcyclephases()
else:
for k in self.cell_manager.cells.keys():
self.cell_manager.cells[k].stats["Cell Cycle Phase"] = 0
print("Processing Cells Finished")