Ejemplo n.º 1
0
# # gamma1 * s t
# est_gamma1 = tangent_slope_arr[ 0 ]
# est_gamma1.Write( '/media/shong/IntHard1/Projects/4DShapeAnalysis/Data/ACE_IBIS_CC/Data/HMG_AutismSpecOnly_ADOS_New/est_gamma1.tVec')

# # gamma2 * ADOS t
# est_gamma2 = tangent_slope_arr[ 1 ]
# est_gamma2.Write( '/media/shong/IntHard1/Projects/4DShapeAnalysis/Data/ACE_IBIS_CC/Data/HMG_AutismSpecOnly_ADOS_New/est_gamma2.tVec')

# Read
est_beta0 = manifolds.kendall2D(nPt)
est_beta0.Read(
    '/media/shong/IntHard1/Projects/4DShapeAnalysis/Data/ACE_IBIS_CC/Data/HMG_AutismSpecOnly_ADOS_New/est_beta0.pt'
)

est_beta1 = manifolds.kendall2D_tVec(nPt)
est_beta1.Read(
    '/media/shong/IntHard1/Projects/4DShapeAnalysis/Data/ACE_IBIS_CC/Data/HMG_AutismSpecOnly_ADOS_New/est_beta1.tVec'
)

est_beta2 = manifolds.kendall2D_tVec(nPt)
est_beta2.Read(
    '/media/shong/IntHard1/Projects/4DShapeAnalysis/Data/ACE_IBIS_CC/Data/HMG_AutismSpecOnly_ADOS_New/est_beta2.tVec'
)

est_gamma0 = manifolds.kendall2D_tVec(nPt)
est_gamma0.Read(
    '/media/shong/IntHard1/Projects/4DShapeAnalysis/Data/ACE_IBIS_CC/Data/HMG_AutismSpecOnly_ADOS_New/est_gamma0.tVec'
)

est_gamma1 = manifolds.kendall2D_tVec(nPt)
Ejemplo n.º 2
0
mean_shape.Read(
    '/media/shong/IntHard1/Projects/4DShapeAnalysis/Data/ACE_IBIS_CC/Data/MLMG_LRHR_Autism/mean_shape.pt'
)

for i in range(len(shape_list_all)):
    shape_i = shape_list_all[i]
    t_i = t_list_all[i]

    s_i = s_list_all[i]
    hr_i = hr_list_all[i]
    lr_i = lr_list_all[i]
    autism_i = autism_list_all[i]
    autismSpec_i = autismspec_list_all[i]
    healthy_i = none_list_all[i]

    beta_i = manifolds.kendall2D_tVec(nPt)

    for k in range(2):
        for j in range(nPt):
            beta_i.tVector[k, j] = (est_beta1.tVector[k, j] * s_i +
                                    est_beta2.tVector[k, j] * hr_i +
                                    est_beta3.tVector[k, j] * autism_i)

    p1_i = est_beta0.ExponentialMap(beta_i)

    gamma0_p1_i = est_beta0.ParallelTranslateAtoB(est_beta0, p1_i, est_gamma0)
    gamma1_p1_i = est_beta0.ParallelTranslateAtoB(est_beta0, p1_i, est_gamma1)
    gamma2_p1_i = est_beta0.ParallelTranslateAtoB(est_beta0, p1_i, est_gamma2)
    gamma3_p1_i = est_beta0.ParallelTranslateAtoB(est_beta0, p1_i, est_gamma3)

    gamma_i = manifolds.kendall2D_tVec(nPt)
# est_gamma5.Write( '/media/shong/IntHard1/Projects/4DShapeAnalysis/Data/ACE_IBIS_CC/Data/MLMG/est_gamma5.tVec')

# # gamma6 * healthy t
# est_gamma6 = tangent_slope_arr[ 5 ]
# est_gamma6.Write( '/media/shong/IntHard1/Projects/4DShapeAnalysis/Data/ACE_IBIS_CC/Data/MLMG/est_gamma6.tVec')

print("# of Subjects")
print(len(shape_list_a))

# Read
est_beta0 = manifolds.kendall2D(nPt)
est_beta0.Read(
    '/media/shong/IntHard1/Projects/4DShapeAnalysis/Data/ACE_IBIS_CC/Data/MLMG/est_beta0.pt'
)

est_beta1 = manifolds.kendall2D_tVec(nPt)
est_beta1.Read(
    '/media/shong/IntHard1/Projects/4DShapeAnalysis/Data/ACE_IBIS_CC/Data/MLMG/est_beta1.tVec'
)

est_beta2 = manifolds.kendall2D_tVec(nPt)
est_beta2.Read(
    '/media/shong/IntHard1/Projects/4DShapeAnalysis/Data/ACE_IBIS_CC/Data/MLMG/est_beta2.tVec'
)

est_beta3 = manifolds.kendall2D_tVec(nPt)
est_beta3.Read(
    '/media/shong/IntHard1/Projects/4DShapeAnalysis/Data/ACE_IBIS_CC/Data/MLMG/est_beta3.tVec'
)

est_beta4 = manifolds.kendall2D_tVec(nPt)