def test_history(self):
ws_name = "GEM38370_Focussed_Legacy"
file_name = FileFinder.getFullPath(ws_name + ".nxs")
Load(file_name, OutputWorkspace=ws_name)
ws = mtd[ws_name]
history = ws.getHistory()
self.assertEquals(history.empty(), False)
self.assertEquals(history.size(), 4)
alg_hists = history.getAlgorithmHistories()
self.assertEquals(len(alg_hists), 4)
self.assertEquals(alg_hists[0].name(), "LoadRaw")
self.assertEquals(alg_hists[1].name(), "AlignDetectors")
self.assertEquals(alg_hists[2].name(), "DiffractionFocussing")
self.assertEquals(alg_hists[3].name(), "Load")
self.assertEquals(history.getAlgorithmHistory(0).name(), "LoadRaw")
self.assertEquals(history.getAlgorithmHistory(1).name(), "AlignDetectors")
self.assertEquals(history.getAlgorithmHistory(2).name(), "DiffractionFocussing")
self.assertEquals(history.getAlgorithmHistory(3).name(), "Load")
alg = history.lastAlgorithm()
self.assertEquals(alg.name(), "Load")
alg = history.getAlgorithm(history.size()-1)
self.assertEquals(alg.name(), "Load")
def test_history(self):
ws_name = "GEM38370_Focussed_Legacy"
file_name = FileFinder.getFullPath(ws_name + ".nxs")
Load(file_name, OutputWorkspace=ws_name)
ws = mtd[ws_name]
history = ws.getHistory()
self.assertEqual(history.empty(), False)
self.assertEqual(history.size(), 4)
alg_hists = history.getAlgorithmHistories()
self.assertEqual(len(alg_hists), 4)
self.assertEqual(alg_hists[0].name(), "LoadRaw")
self.assertEqual(alg_hists[1].name(), "AlignDetectors")
self.assertEqual(alg_hists[2].name(), "DiffractionFocussing")
self.assertEqual(alg_hists[3].name(), "Load")
self.assertEqual(history.getAlgorithmHistory(0).name(), "LoadRaw")
self.assertEqual(
history.getAlgorithmHistory(1).name(), "AlignDetectors")
self.assertEqual(
history.getAlgorithmHistory(2).name(), "DiffractionFocussing")
self.assertEqual(history.getAlgorithmHistory(3).name(), "Load")
alg = history.lastAlgorithm()
self.assertEqual(alg.name(), "Load")
alg = history.getAlgorithm(history.size() - 1)
self.assertEqual(alg.name(), "Load")
def test_get_history_chained_calls(self):
ws_name = "GEM38370_Focussed_Legacy"
file_name = FileFinder.getFullPath(ws_name + ".nxs")
Load(file_name, OutputWorkspace=ws_name)
ws = mtd[ws_name]
load_filename = ws.getHistory().lastAlgorithm().getProperty(
"Filename").value
self.assertEqual(file_name, load_filename[0])
def find_all_from_query(self, query_string):
try:
results = FileFinder.findRuns(query_string)
return ('', [self.find_from_file_path(file_path)
for file_path in results])
except RuntimeError:
return ('', [])
except ValueError as ex:
return (str(ex), [])
def find_all_from_query(self, query_string):
try:
results = FileFinder.findRuns(query_string)
return ('', [
self.find_from_file_path(file_path) for file_path in results
])
except RuntimeError:
return ('', [])
except ValueError as ex:
return (str(ex), [])
def run_file(run_number: Union[str, int],
instrument: Optional[str] = None,
oncat: Optional[bool] = True) -> Optional[None]:
r"""
@brief Test whether the file for a run number exists.
@details Search first the datasearch directories and if file is not found, use the locations
provided by ONCat
@param run_number : just the bare run number, e.g. 12345
@param instrument : if None, retrieve the default instrument from the configuration service
@param oncat : whether to use the ONCat archiving service
@returns None if file not found, otherwise absolute path to events file
"""
if isinstance(
run_number,
str): # verify run_number represents a positive integer number
try:
int(run_number)
except ValueError:
raise ValueError(f'{run_number} does not represent a number')
assert int(
run_number
) > 0, f'{run_number} does not represent an positive integer number'
if instrument is None:
instrument = config['default.instrument']
root_name = f'{instrument}_{run_number}'
# check in 'datasearch.directories'
for extension in ('.h5', '.nxs', '.nxs.h5'):
file_path = FileFinder.getFullPath(root_name + extension)
if Path(file_path).is_file():
return file_path
# check via locations provided by ONCat
if oncat:
try:
for option in FileFinder.findRuns(root_name):
if Path(option).is_file():
return option
except RuntimeError:
return None # no suggestions found
return None
def test_history(self):
ws_name = "GEM38370_Focussed_Legacy"
file_name = FileFinder.getFullPath(ws_name + ".nxs")
Load(file_name, OutputWorkspace=ws_name)
ws = mtd[ws_name]
history = ws.getHistory()
alg_hist = history.getAlgorithmHistory(0)
self.assertEquals(alg_hist.name(), "LoadRaw")
properties = alg_hist.getProperties()
self.assertEquals(len(properties), 7)
self.assertEquals(properties[0].name(), "Filename")
self.assertEquals(
properties[0].value(),
"/home/dmn58364/Mantid/trunk/Test/Data/GEM38370.raw")
self.assertEquals(properties[0].isDefault(), False)
self.assertEquals(properties[0].direction(), 0)
self.assertEquals(properties[1].name(), "OutputWorkspace")
self.assertEquals(properties[1].value(), "GEM38370")
self.assertEquals(properties[1].isDefault(), False)
self.assertEquals(properties[1].direction(), 1)
self.assertEquals(properties[2].name(), "SpectrumMin")
self.assertEquals(properties[2].value(), '1')
self.assertEquals(properties[2].isDefault(), True)
self.assertEquals(properties[2].direction(), 0)
self.assertEquals(properties[3].name(), "SpectrumMax")
self.assertEquals(properties[3].value(), '2147483632')
self.assertEquals(properties[3].isDefault(), True)
self.assertEquals(properties[3].direction(), 0)
self.assertEquals(properties[4].name(), "SpectrumList")
self.assertEquals(properties[4].value(), "")
self.assertEquals(properties[4].isDefault(), True)
self.assertEquals(properties[4].direction(), 0)
self.assertEquals(properties[5].name(), "Cache")
self.assertEquals(properties[5].value(), "If Slow")
self.assertEquals(properties[5].isDefault(), True)
self.assertEquals(properties[5].direction(), 0)
self.assertEquals(properties[6].name(), "LoadLogFiles")
self.assertEquals(properties[6].value(), '1')
self.assertEquals(properties[6].isDefault(), True)
self.assertEquals(properties[6].direction(), 0)
def _load_current_state(self, file_information, row_user_file):
if row_user_file:
# Has a custom user file so ignore any settings from GUI
user_file_path = FileFinder.getFullPath(row_user_file)
if not os.path.exists(user_file_path):
raise ValueError(
f"The user path {user_file_path}\n"
" does not exist. Make sure a valid user file has been specified."
)
state = FileLoading.load_user_file(
user_file_path, file_information=file_information)
gui_state = StateGuiModel(state)
else:
# We want to copy our master GUI state to set any row options (see prototype pattern)
gui_state = copy.deepcopy(self._state_gui_model)
return gui_state
def test_history(self):
ws_name = "GEM38370_Focussed_Legacy"
file_name = FileFinder.getFullPath(ws_name + ".nxs")
Load(file_name, OutputWorkspace=ws_name)
ws = mtd[ws_name]
history = ws.getHistory()
alg_hist = history.getAlgorithmHistory(0)
self.assertEquals(alg_hist.name(), "LoadRaw")
properties = alg_hist.getProperties()
self.assertEquals(len(properties), 7)
self.assertEquals(properties[0].name(), "Filename")
self.assertEquals(properties[0].value(), "/home/dmn58364/Mantid/trunk/Test/Data/GEM38370.raw")
self.assertEquals(properties[0].isDefault(), False)
self.assertEquals(properties[0].direction(), 0)
self.assertEquals(properties[1].name(), "OutputWorkspace")
self.assertEquals(properties[1].value(), "GEM38370")
self.assertEquals(properties[1].isDefault(), False)
self.assertEquals(properties[1].direction(), 1)
self.assertEquals(properties[2].name(), "SpectrumMin")
self.assertEquals(properties[2].value(), '1')
self.assertEquals(properties[2].isDefault(), True)
self.assertEquals(properties[2].direction(), 0)
self.assertEquals(properties[3].name(), "SpectrumMax")
self.assertEquals(properties[3].value(), '2147483632')
self.assertEquals(properties[3].isDefault(), True)
self.assertEquals(properties[3].direction(), 0)
self.assertEquals(properties[4].name(), "SpectrumList")
self.assertEquals(properties[4].value(), "")
self.assertEquals(properties[4].isDefault(), True)
self.assertEquals(properties[4].direction(), 0)
self.assertEquals(properties[5].name(), "Cache")
self.assertEquals(properties[5].value(), "If Slow")
self.assertEquals(properties[5].isDefault(), True)
self.assertEquals(properties[5].direction(), 0)
self.assertEquals(properties[6].name(), "LoadLogFiles")
self.assertEquals(properties[6].value(), '1')
self.assertEquals(properties[6].isDefault(), True)
self.assertEquals(properties[6].direction(), 0)
def getFilePath(run,ext,instr):
path = None
fname = None
if(os.path.isfile(run)):
#using full file path
path = run
#base name less extension
base = os.path.basename(path)
fname = os.path.splitext(base)[0]
else:
#using run number
path = FileFinder.getFullPath(instr + "_" + run + ext)
fname = instr + "_" + run
if path:
return path, fname
else:
error = 'ERROR *** Could not find ' + ext + ' file: ' + fname
sys.exit(error)
def getFilePath(run, ext, instr):
path = None
fname = None
if os.path.isfile(run):
# using full file path
path = run
# base name less extension
base = os.path.basename(path)
fname = os.path.splitext(base)[0]
else:
# using run number
path = FileFinder.getFullPath(instr + "_" + run + ext)
fname = instr + "_" + run
if path:
return path, fname
else:
error = 'ERROR *** Could not find ' + ext + ' file: ' + fname
sys.exit(error)
def runTest(self):
UseCompatibilityMode()
SANS2D()
Set1D()
Detector("rear-detector")
MaskFile('Mask_SANS2D_Batch_Toml.toml')
Gravity(True)
csv_file = FileFinder.getFullPath('SANS2D_periodTests.csv')
BatchReduce(csv_file,
'nxs',
plotresults=False,
saveAlgs={
'SaveCanSAS1D': 'xml',
'SaveNexus': 'nxs'
})
xml_path = os.path.join(
config['defaultsave.directory'],
'5512p7_SANS2DBatch_p7rear_1D_2.0_14.0Phi-45.0_45.0.xml')
if os.path.exists(xml_path):
os.remove(xml_path)
def runTest(self):
UseCompatibilityMode()
LOQ()
csv_file = FileFinder.getFullPath("toml_v1_file_m4.csv")
BatchReduce(csv_file, 'raw')
