def execute(self):
'''
Kick off the execution of the step, in this case an interactive dialog.
User invokes the _doneExecution() method when finished, via pushbutton.
'''
smoothfitModel = None
if self._view is None:
smoothfitModel = SmoothfitModel()
smoothfitModel.setLocation(
os.path.join(self._location, self._config['identifier']))
self._view = SmoothfitWidget(smoothfitModel)
self._view.registerDoneExecution(self._doneExecution)
else:
smoothfitModel = self._view.getModel()
self._view.clear()
smoothfitModel.clear()
if self._inputZincModelFile is not None:
smoothfitModel.setZincModelFile(self._inputZincModelFile)
if self._inputZincPointCloudFile is not None:
smoothfitModel.setZincPointCloudFile(self._inputZincPointCloudFile)
if self._inputPointCloudData is not None:
smoothfitModel.setPointCloudData(self._inputPointCloudData)
self._view.initialise()
self._view.setEnableSettingsSave(self._config['enable_settings_save'])
self._setCurrentWidget(self._view)
def execute(self):
'''
Kick off the execution of the step, in this case an interactive dialog.
User invokes the _doneExecution() method when finished, via pushbutton.
'''
smoothfitModel = None
if self._view is None:
smoothfitModel = SmoothfitModel()
smoothfitModel.setLocation(os.path.join(self._location, self._config['identifier']))
self._view = SmoothfitWidget(smoothfitModel)
self._view.registerDoneExecution(self._doneExecution)
else:
smoothfitModel = self._view.getModel()
self._view.clear()
smoothfitModel.clear()
if self._inputZincModelFile is not None:
smoothfitModel.setZincModelFile(self._inputZincModelFile)
if self._inputZincPointCloudFile is not None:
smoothfitModel.setZincPointCloudFile(self._inputZincPointCloudFile)
if self._inputPointCloudData is not None:
smoothfitModel.setPointCloudData(self._inputPointCloudData)
self._view.initialise()
self._view.setEnableSettingsSave(self._config['enable_settings_save'])
self._setCurrentWidget(self._view)
class smoothfitStep(WorkflowStepMountPoint):
'''
Skeleton step which is intended to be a helpful starting point
for new steps.
'''
def __init__(self, location):
super(smoothfitStep, self).__init__('smoothfit', location)
self._configured = False # A step cannot be executed until it has been configured.
self._category = 'Fitting'
# Add any other initialisation code here:
self._icon = QtGui.QImage(':/smoothfitstep/images/fitting.png')
# Ports:
self.addPort(('http://physiomeproject.org/workflow/1.0/rdf-schema#port',
'http://physiomeproject.org/workflow/1.0/rdf-schema#uses',
'http://physiomeproject.org/workflow/1.0/rdf-schema#file_location'))
self.addPort(('http://physiomeproject.org/workflow/1.0/rdf-schema#port',
'http://physiomeproject.org/workflow/1.0/rdf-schema#uses',
'http://physiomeproject.org/workflow/1.0/rdf-schema#file_location'))
self.addPort(('http://physiomeproject.org/workflow/1.0/rdf-schema#port',
'http://physiomeproject.org/workflow/1.0/rdf-schema#uses',
'http://physiomeproject.org/workflow/1.0/rdf-schema#pointcloud'))
self.addPort(('http://physiomeproject.org/workflow/1.0/rdf-schema#port',
'http://physiomeproject.org/workflow/1.0/rdf-schema#provides',
'http://physiomeproject.org/workflow/1.0/rdf-schema#file_location'))
# Port data:
self._inputZincModelFile = None # http://physiomeproject.org/workflow/1.0/rdf-schema#zincmodel
self._inputZincPointCloudFile = None # http://physiomeproject.org/workflow/1.0/rdf-schema#file_location
self._inputPointCloudData = None # http://physiomeproject.org/workflow/1.0/rdf-schema#pointcloud
self._outputZincModel = None # http://physiomeproject.org/workflow/1.0/rdf-schema#zincmodel
# Config:
self._config = {}
self._config['identifier'] = ''
self._config['enable_settings_save'] = True
self._view = None
def execute(self):
'''
Kick off the execution of the step, in this case an interactive dialog.
User invokes the _doneExecution() method when finished, via pushbutton.
'''
smoothfitModel = None
if self._view is None:
smoothfitModel = SmoothfitModel()
smoothfitModel.setLocation(os.path.join(self._location, self._config['identifier']))
self._view = SmoothfitWidget(smoothfitModel)
self._view.registerDoneExecution(self._doneExecution)
else:
smoothfitModel = self._view.getModel()
self._view.clear()
smoothfitModel.clear()
if self._inputZincModelFile is not None:
smoothfitModel.setZincModelFile(self._inputZincModelFile)
if self._inputZincPointCloudFile is not None:
smoothfitModel.setZincPointCloudFile(self._inputZincPointCloudFile)
if self._inputPointCloudData is not None:
smoothfitModel.setPointCloudData(self._inputPointCloudData)
self._view.initialise()
self._view.setEnableSettingsSave(self._config['enable_settings_save'])
self._setCurrentWidget(self._view)
def setPortData(self, index, dataIn):
'''
Set inputs, called by mapclient framework.
'''
if index == 0:
self._inputZincModelFile = dataIn # http://physiomeproject.org/workflow/1.0/rdf-schema#zincmodel
elif index == 1:
self._inputZincPointCloudFile = dataIn # http://physiomeproject.org/workflow/1.0/rdf-schema#zincpointcloud
elif index == 2:
self._inputPointCloudData = dataIn
def getPortData(self, index):
'''
Get outputs, called by mapclient framework.
'''
self._outputZincModel = self._view._model.getOutputModelFileName()
return self._outputZincModel # http://physiomeproject.org/workflow/1.0/rdf-schema#zincmodel
def configure(self):
'''
This function will be called when the configure icon on the step is
clicked. It is appropriate to display a configuration dialog at this
time. If the conditions for the configuration of this step are complete
then set:
self._configured = True
'''
dlg = ConfigureDialog()
dlg.identifierOccursCount = self._identifierOccursCount
dlg.setConfig(self._config)
dlg.validate()
dlg.setModal(True)
if dlg.exec_():
self._config = dlg.getConfig()
self._configured = dlg.validate()
self._configuredObserver()
def getIdentifier(self):
'''
The identifier is a string that must be unique within a workflow.
'''
return self._config['identifier']
def setIdentifier(self, identifier):
'''
The framework will set the identifier for this step when it is loaded.
'''
self._config['identifier'] = identifier
def serialize(self):
'''
Add code to serialize this step to string. This method should
implement the opposite of 'deserialize'.
'''
return json.dumps(self._config, default=lambda o: o.__dict__, sort_keys=True, indent=4)
def deserialize(self, string):
'''
Add code to deserialize this step from string. This method should
implement the opposite of 'serialize'.
'''
self._config.update(json.loads(string))
d = ConfigureDialog()
d.identifierOccursCount = self._identifierOccursCount
d.setConfig(self._config)
self._configured = d.validate()
class smoothfitStep(WorkflowStepMountPoint):
'''
Skeleton step which is intended to be a helpful starting point
for new steps.
'''
def __init__(self, location):
super(smoothfitStep, self).__init__('smoothfit', location)
self._configured = False # A step cannot be executed until it has been configured.
self._category = 'Fitting'
# Add any other initialisation code here:
self._icon = QtGui.QImage(':/smoothfitstep/images/fitting.png')
# Ports:
self.addPort(
('http://physiomeproject.org/workflow/1.0/rdf-schema#port',
'http://physiomeproject.org/workflow/1.0/rdf-schema#uses',
'http://physiomeproject.org/workflow/1.0/rdf-schema#file_location'
))
self.addPort(
('http://physiomeproject.org/workflow/1.0/rdf-schema#port',
'http://physiomeproject.org/workflow/1.0/rdf-schema#uses',
'http://physiomeproject.org/workflow/1.0/rdf-schema#file_location'
))
self.addPort(
('http://physiomeproject.org/workflow/1.0/rdf-schema#port',
'http://physiomeproject.org/workflow/1.0/rdf-schema#uses',
'http://physiomeproject.org/workflow/1.0/rdf-schema#pointcloud'))
self.addPort(
('http://physiomeproject.org/workflow/1.0/rdf-schema#port',
'http://physiomeproject.org/workflow/1.0/rdf-schema#provides',
'http://physiomeproject.org/workflow/1.0/rdf-schema#file_location'
))
# Port data:
self._inputZincModelFile = None # http://physiomeproject.org/workflow/1.0/rdf-schema#zincmodel
self._inputZincPointCloudFile = None # http://physiomeproject.org/workflow/1.0/rdf-schema#file_location
self._inputPointCloudData = None # http://physiomeproject.org/workflow/1.0/rdf-schema#pointcloud
self._outputZincModel = None # http://physiomeproject.org/workflow/1.0/rdf-schema#zincmodel
# Config:
self._config = {}
self._config['identifier'] = ''
self._config['enable_settings_save'] = True
self._view = None
def execute(self):
'''
Kick off the execution of the step, in this case an interactive dialog.
User invokes the _doneExecution() method when finished, via pushbutton.
'''
smoothfitModel = None
if self._view is None:
smoothfitModel = SmoothfitModel()
smoothfitModel.setLocation(
os.path.join(self._location, self._config['identifier']))
self._view = SmoothfitWidget(smoothfitModel)
self._view.registerDoneExecution(self._doneExecution)
else:
smoothfitModel = self._view.getModel()
self._view.clear()
smoothfitModel.clear()
if self._inputZincModelFile is not None:
smoothfitModel.setZincModelFile(self._inputZincModelFile)
if self._inputZincPointCloudFile is not None:
smoothfitModel.setZincPointCloudFile(self._inputZincPointCloudFile)
if self._inputPointCloudData is not None:
smoothfitModel.setPointCloudData(self._inputPointCloudData)
self._view.initialise()
self._view.setEnableSettingsSave(self._config['enable_settings_save'])
self._setCurrentWidget(self._view)
def setPortData(self, index, dataIn):
'''
Set inputs, called by mapclient framework.
'''
if index == 0:
self._inputZincModelFile = dataIn # http://physiomeproject.org/workflow/1.0/rdf-schema#zincmodel
elif index == 1:
self._inputZincPointCloudFile = dataIn # http://physiomeproject.org/workflow/1.0/rdf-schema#zincpointcloud
elif index == 2:
self._inputPointCloudData = dataIn
def getPortData(self, index):
'''
Get outputs, called by mapclient framework.
'''
self._outputZincModel = self._view._model.getOutputModelFileName()
return self._outputZincModel # http://physiomeproject.org/workflow/1.0/rdf-schema#zincmodel
def configure(self):
'''
This function will be called when the configure icon on the step is
clicked. It is appropriate to display a configuration dialog at this
time. If the conditions for the configuration of this step are complete
then set:
self._configured = True
'''
dlg = ConfigureDialog()
dlg.identifierOccursCount = self._identifierOccursCount
dlg.setConfig(self._config)
dlg.validate()
dlg.setModal(True)
if dlg.exec_():
self._config = dlg.getConfig()
self._configured = dlg.validate()
self._configuredObserver()
def getIdentifier(self):
'''
The identifier is a string that must be unique within a workflow.
'''
return self._config['identifier']
def setIdentifier(self, identifier):
'''
The framework will set the identifier for this step when it is loaded.
'''
self._config['identifier'] = identifier
def serialize(self):
'''
Add code to serialize this step to string. This method should
implement the opposite of 'deserialize'.
'''
return json.dumps(self._config,
default=lambda o: o.__dict__,
sort_keys=True,
indent=4)
def deserialize(self, string):
'''
Add code to deserialize this step from string. This method should
implement the opposite of 'serialize'.
'''
self._config.update(json.loads(string))
d = ConfigureDialog()
d.identifierOccursCount = self._identifierOccursCount
d.setConfig(self._config)
self._configured = d.validate()
