def gen_s(tab, root, nom):
old_locale = locale.getlocale()
locale.setlocale(locale.LC_ALL, "C")
#tab=ser.read_s()
k = len(tab)
f = open(find_resource(os.path.join("hsqc", "resources", 'entete.txt')),
'r')
l = f.readlines()
f.close()
f = open(os.path.join(root, nom), 'w')
l1 = f.writelines(l)
#l1=f.writelines('\n')
for h in range(k):
m1 = '<Peak2D F1="'
m2 = str(tab[h][0])
m3 = '" F2="'
m4 = str(tab[h][1])
m5 = '" annotation="'
m6 = str(tab[h][2])
m7 = '" intensity="'
m8 = str(tab[h][3])
m9 = '" type="0"/>\n'
m = m1 + m2 + m3 + m4 + m5 + m6 + m7 + m8 + m9
l1 = f.writelines(m)
l1 = f.writelines('</PeakList2D> \n')
l1 = f.writelines('</PeakList> \n')
f.close()
locale.setlocale(locale.LC_ALL, old_locale)
def __init__(self, parent=None, *args, **kwargs):
resource = wx.xrc.EmptyXmlResource()
resource.InsertHandler(medipy.gui.xrc_wrapper.DirectoryXMLHandler())
resource.InsertHandler(medipy.gui.xrc_wrapper.FileXMLHandler())
file = open(find_resource("resources/gui/spectro_dialog.xrc"))
resource.LoadFromString(file.read())
dialog = resource.LoadDialog(parent, "main_dialog")
medipy.gui.xrc_wrapper.Dialog.__init__(self, dialog, *args, **kwargs)
controls = [
"dir_dialog", "dir_listbox", "image_listbox", "reference_listbox",
"annotations_listbox", "annotations_checkbox", "file_dialog",
"open_button", "cancel_button"
]
for control in controls:
setattr(self, "_" + control, wx.xrc.XRCCTRL(self, control))
self.SetTitle("Load spectroscopy image")
self._open_button.Disable()
# Attributes initialization
self._patient_dirname = None
self._image_dict = {}
self._rect_dict = {}
self._image_path = None
self._reference_path = None
self._annotations_path = None
self._file_dialog._wildcard = "Annotation file|*.xml"
self._file_dialog._button.Disable()
# Events
self.Bind(wx.EVT_CLOSE, self.OnClose)
self._dir_listbox.Bind(wx.EVT_LISTBOX, self.OnDirChosen)
self._image_listbox.Bind(wx.EVT_LISTBOX, self.OnImageChosen)
self._reference_listbox.Bind(wx.EVT_LISTBOX, self.OnReferenceChosen)
self._annotations_listbox.Bind(wx.EVT_LISTBOX, self.OnAnnotationChosen)
self._annotations_checkbox.Bind(wx.EVT_CHECKBOX, self.OnCustomChecked)
self._open_button.Bind(wx.EVT_BUTTON, self.OnOpenClicked)
self._cancel_button.Bind(wx.EVT_BUTTON, self.OnCancelClicked)
self._dir_dialog.add_observer("value", self.OnPathChanged)
self._file_dialog.add_observer("value", self.OnCustomPathChanged)
elif level > other_level:
# Went too far, in another menu
break
return [
build_hierarchy(lines, x, top_level, first_children, first_siblings)
for x in top_level
]
if __name__ == "__main__":
import wx
from medipy.base import find_resource
from medipy.gui.menu_builder import fill_treectrl
menu = build_menu(find_resource("gui/full.menu"))
app = wx.PySimpleApp()
frame = wx.Frame(None)
sizer = wx.BoxSizer()
frame.SetSizer(sizer)
treectrl = wx.TreeCtrl(frame,
style=wx.TR_DEFAULT_STYLE | wx.TR_HAS_BUTTONS
| wx.TR_SINGLE | wx.TR_HIDE_ROOT)
fill_treectrl(menu, treectrl)
sizer.Add(treectrl, 1, wx.EXPAND)
frame.Show()
app.MainLoop()
def __init__(self, parent, *args, **kwargs):
self._timer = wx.Timer()
self._delay = None
self._parent = parent
self._animated_objects_3d = []
self._visible_objects_3d = []
self._stop_flag = True
wx.Dialog.__init__(self,
parent,
style=wx.DEFAULT_DIALOG_STYLE | wx.RESIZE_BORDER,
*args,
**kwargs)
dialog_file = find_resource(
os.path.join("resources", "gui", "cine_3d_dialog.xrc"))
self._dialog_xml = xml.dom.minidom.parse(dialog_file)
self._dialog_xrc = wx.xrc.XmlResource("")
self._dialog_xrc.LoadFromString(str(self._dialog_xml.toxml()))
# Widgets
self._panel = self._dialog_xrc.LoadPanel(self, "main_panel")
for control in [
"objects_check_list_box", "type_combo_box", "cursor_slider",
"cursor_text", "speed_slider", "speed_text",
"play_pause_button", "stop_button", "close_button"
]:
setattr(self, "_" + control, wx.xrc.XRCCTRL(self, control))
self._speed_slider.SetValue(5)
self._speed_text.SetValue(str(self._speed_slider.GetValue()))
self._play_bitmap = wx.Bitmap(
find_resource(
os.path.join("resources", "gui", "media-playback-start.png")))
self._pause_bitmap = wx.Bitmap(
find_resource(
os.path.join("resources", "gui", "media-playback-pause.png")))
stop_bitmap = wx.Bitmap(
find_resource(
os.path.join("resources", "gui", "media-playback-stop.png")))
self._play_pause_button.SetBitmapLabel(self._play_bitmap)
self._stop_button.SetBitmapLabel(stop_bitmap)
# Layout
global_sizer = wx.BoxSizer(wx.VERTICAL)
global_sizer.Add(self._panel, 1, wx.EXPAND)
self.SetTitle("Cine 3D")
self.SetSizer(global_sizer)
global_sizer.Layout()
self.Fit()
# Events
self.Bind(wx.EVT_CLOSE, self.OnClose)
self._timer.Bind(wx.EVT_TIMER, self.OnTimer)
self._type_combo_box.Bind(wx.EVT_COMBOBOX, self.OnComboBox)
self._cursor_slider.Bind(wx.EVT_SLIDER, self.OnCursorSlider)
self._cursor_text.Bind(wx.EVT_TEXT, self.OnCursorText)
self._speed_slider.Bind(wx.EVT_SLIDER, self.OnSpeedSlider)
self._speed_text.Bind(wx.EVT_TEXT, self.OnSpeedText)
self._play_pause_button.Bind(wx.EVT_BUTTON,
self.OnPlayPauseButtonClick)
self._stop_button.Bind(wx.EVT_BUTTON, self.OnStopButtonClick)
self._close_button.Bind(wx.EVT_BUTTON, lambda event: self.Close())
self._parent._objects_check_list_box.Bind(
wx.EVT_CHECKLISTBOX, self._on_cine_objects_3d_modified)
self._parent.objects_3d.add_observer("any",
self._on_cine_objects_3d_modified)
self._objects_check_list_box.Bind(wx.EVT_CHECKLISTBOX,
self._on_fixed_objects_3d_modified)
self._set_animated_objects()
self._set_cursor_slider()
self._update_objects_check_list_box()
self._reset_animation()
self._set_fps(self._speed_slider.GetValue())
self.stop()
def __init__(self,
parent,
wx_id=wx.ID_ANY,
pos=wx.DefaultPosition,
size=wx.DefaultSize,
style=wx.DEFAULT_DIALOG_STYLE,
name="cine_dialog"):
self._timer = wx.Timer()
self._delay = None
self._image = None
self._current_layer = 0
self._status = "stop"
super(CineDialog, self).__init__(parent, wx_id, "", pos, size, style,
name)
# Resources
self._play_bitmap = wx.Bitmap(
find_resource(
os.path.join("resources", "gui", "media-playback-start.png")))
self._pause_bitmap = wx.Bitmap(
find_resource(
os.path.join("resources", "gui", "media-playback-pause.png")))
stop_bitmap = wx.Bitmap(
find_resource(
os.path.join("resources", "gui", "media-playback-stop.png")))
# Widgets
self._layer = Int(self, 1, (1, 1))
self._speed = Int(self, 1, (1, 20))
self._play_pause = wx.BitmapButton(self, wx.ID_ANY, self._play_bitmap)
self._stop = wx.BitmapButton(self, wx.ID_ANY, stop_bitmap)
# self.close = wx.Button(self, wx.ID_ANY, "Close")
# Layout
layer_speed_sizer = wx.FlexGridSizer(2, 2)
layer_speed_sizer.AddGrowableCol(1)
layer_speed_sizer.Add(wx.StaticText(self, wx.ID_ANY, "Layer : "),
flag=wx.ALIGN_CENTER)
layer_speed_sizer.Add(self._layer, 1)
layer_speed_sizer.Add(wx.StaticText(self, wx.ID_ANY, "Speed : "),
flag=wx.ALIGN_CENTER)
layer_speed_sizer.Add(self._speed, 1)
buttons_sizer = wx.BoxSizer(wx.HORIZONTAL)
buttons_sizer.Add(self._play_pause)
buttons_sizer.Add(self._stop)
# buttons_sizer.AddStretchSpacer(1)
# buttons_sizer.Add(self.close, flag=wx.ALIGN_CENTER)
main_sizer = wx.BoxSizer(wx.VERTICAL)
main_sizer.Add(layer_speed_sizer, 0, wx.EXPAND)
main_sizer.Add(buttons_sizer, 0, wx.EXPAND)
self.SetSizer(main_sizer)
main_sizer.SetSizeHints(self)
# Events
self.Bind(wx.EVT_CLOSE, self.OnClose)
self._timer.Bind(wx.EVT_TIMER, self.OnTimer)
self._layer.add_observer("value", self.on_layer)
self._speed.add_observer("value", self.on_speed)
self._play_pause.Bind(wx.EVT_BUTTON, self.OnPlayPauseClicked)
self._stop.Bind(wx.EVT_BUTTON, self.OnStopClicked)
self._set_fps(self._speed.value)