def output(self, simulation: mp.Simulation, each: Union[int, float],
until: Union[int, float]):
simulation.use_output_directory(self.dir_out)
simulation.run(mp.at_every(each,
mp.output_png(mp.Ez,
"-Zc" + self.colormap)),
until=until)
def __init__(self, dir_name, wavelength, cyt_absorb):
self.base_directory = base_directory + str(dir_name)
self.wavelength = wavelength
self.cyt_absorb = cyt_absorb
self.frequency = 1 / wavelength
# Calculate wavelengths dependent on RI
self.wavelength_in_media = wavelength / ri_media
self.wavelength_in_cytoplasm = wavelength / ri_cytoplasm
max_freq = self.frequency - 0.01
min_freq = self.frequency + 0.01
self.pulse_width = abs(max_freq - min_freq)
cell = mp.Vector3(sxx, sxy, 0)
pml_layers = [mp.PML(dpml)]
cytoplasm_material = mp.Medium(index=ri_cytoplasm,
D_conductivity=2 * math.pi * self.frequency * (cyt_absorb / (ri_cytoplasm ** 2)))
cytoplasm_region = mp.Sphere(radius=cell_radius,
center=mp.Vector3(0, 0),
material=cytoplasm_material)
geometry = [cytoplasm_region]
# Sources
kdir = mp.Vector3(1, 0, 0) # direction of k (length is irrelevant)
n = ri_media # refractive index of material containing the source
k = kdir.unit().scale(2 * math.pi * self.frequency * n) # k with correct length
def pw_amp(k, x0):
def _pw_amp(x):
return cmath.exp(1j * k.dot(x + x0))
return _pw_amp
source = [
mp.Source(
mp.ContinuousSource(frequency=self.frequency, fwidth=self.pulse_width), # along x axis
component=mp.Ez,
center=mp.Vector3(-0.5 * simulation_size, 0), # x, ,y ,z
size=mp.Vector3(0, sxy, 0),
amp_func=pw_amp(k, mp.Vector3(x=-0.5 * simulation_size))
)
]
sim = mp.Simulation(
cell_size=cell,
sources=source,
boundary_layers=pml_layers,
resolution=resolution,
geometry=geometry,
default_material=mp.Medium(index=ri_media),
force_complex_fields=complex_f,
eps_averaging=eps_av,
)
sim.use_output_directory(self.base_directory)
sim.run(mp.at_every(0.6, mp.output_png(mp.Ez, "-Zc/data/home/bt16268/simInput/customColour.txt")), until=t)
def __init__(self, dir_name, wavelength, cyt_absorb):
self.base_directory = base_directory + str(dir_name)
self.wavelength = wavelength
self.cyt_absorb = cyt_absorb
self.frequency = 1 / wavelength
# Calculate wavelengths dependent on RI
self.wavelength_in_media = wavelength / ri_media
self.wavelength_in_cytoplasm = wavelength / ri_cytoplasm
max_freq = self.frequency - 0.01
min_freq = self.frequency + 0.01
self.pulse_width = abs(max_freq - min_freq)
cell = mp.Vector3(sxx, sxy, 0)
pml_layers = [mp.PML(dpml)]
cytoplasm_material = mp.Medium(index=ri_cytoplasm,
D_conductivity=2 * math.pi *
self.frequency * (cyt_absorb /
(ri_cytoplasm**2)))
cytoplasm_region = mp.Sphere(radius=cell_radius,
center=mp.Vector3(0, 0),
material=cytoplasm_material)
geometry = []
source = [
mp.Source(mp.ContinuousSource(frequency=self.frequency,
fwidth=self.pulse_width),
compone=mp.Ez,
center=(mp.Vector3(-0.5 * simulation_size, 0)),
size=mp.Vector3(0, 10))
]
sim = mp.Simulation(
cell_size=cell,
sources=source,
boundary_layers=pml_layers,
resolution=resolution,
geometry=geometry,
default_material=mp.Medium(index=ri_media),
force_complex_fields=complex_f,
eps_averaging=eps_av,
)
sim.use_output_directory(self.base_directory)
sim.run(mp.at_every(
0.6,
mp.output_png(mp.Ez,
"-Zc/data/home/bt16268/simInput/customColour.txt")),
until=t)
def notch(w):
print("#----------------------------------------")
print("NOTCH WIDTH: %s nanometers" % (w * 1000))
print("#----------------------------------------")
# w is the width of the notch in the waveguide
angrad = ang * pi / 180
bottomoffset = e * h / tan(angrad)
vertices = [
mp.Vector3(w / 2 + bottomoffset, (.5 + e) * h),
mp.Vector3(-w / 2 - bottomoffset, (.5 + e) * h),
mp.Vector3(-w / 2 + bottomoffset, (.5 - e) * h),
mp.Vector3(w / 2 - bottomoffset, (.5 - e) * h)
]
if bottomoffset > w / 2:
ratio = (w / 2) / bottomoffset
vertices = [
mp.Vector3(w / 2, h / 2),
mp.Vector3(-w / 2, h / 2),
mp.Vector3(0, (.5 - e * ratio) * h)
]
print(vertices)
#Waveguide Geometry
cell = mp.Vector3(a, H)
geometry = [
mp.Block(cell, center=mp.Vector3(0, 0), material=default_material),
mp.Block(mp.Vector3(a, hu + h / 2),
center=mp.Vector3(0, (hu + h / 2) / 2),
material=upper_material),
mp.Block(mp.Vector3(a, hl + h / 2),
center=mp.Vector3(0, -(hl + h / 2) / 2),
material=lower_material),
mp.Block(mp.Vector3(a, h),
center=mp.Vector3(0, 0),
material=core_material)
]
if w > 0:
geometry.append(mp.Prism(vertices, height=1, material=upper_material))
pml_layers = [mp.Absorber(thickness=dpml)]
r00 = None
r01 = None
r10 = None
r11 = None
t00 = None
t01 = None
t10 = None
t11 = None
su0 = None
sd0 = None
su1 = None
sd1 = None
modes = [0, 1]
if only_fund:
modes = [0]
# eig_parity_fund = mp.EVEN_Z+mp.EVEN_Y;
# eig_parity_first = mp.EVEN_Z+mp.ODD_Y;
eig_parity_fund = mp.EVEN_Y
eig_parity_first = mp.ODD_Y
# for mode in [0, 1]:
for mode in modes:
if mode == 0:
eig_parity = eig_parity_fund # Fundamental
print("-----------")
print("MODE TYPE: FUNDAMENTAL")
else:
eig_parity = eig_parity_first # First Order
print("-----------")
print("MODE TYPE: FIRST ORDER")
sources = [
mp.EigenModeSource(mp.ContinuousSource(frequency=fcen),
size=mp.Vector3(0, H),
center=mp.Vector3(Ls, 0),
eig_parity=eig_parity)
]
sim = mp.Simulation(cell_size=cell,
boundary_layers=pml_layers,
geometry=geometry,
sources=sources,
resolution=resolution,
force_complex_fields=True)
'''
#--------------------------------------------------
#FOR DISPLAYING THE GEOMETRY
sim.run(until = 200)
eps_data = sim.get_array(center=mp.Vector3(), size=cell, component=mp.Dielectric)
plt.figure(dpi=100)
plt.imshow(eps_data.transpose(), interpolation='spline36', cmap='binary')
#plt.axis('off')
plt.show()
quit()
#----------------------------------------------------
'''
'''
#------------------------------------------------------
#FOR GENERATING THE ELECTRIC FIELD GIF
#Note: After running this program, write the following commands in Terminal:
# $ source deactivate mp
# $ cd notch-out/
# $ python ../NotchIP.py
sim.use_output_directory()
sim.run(mp.at_beginning(mp.output_epsilon),
mp.to_appended("ez", mp.at_every(0.6, mp.output_efield_z)),
until = 200)
#sim.run(mp.at_every(0.6 , mp.output_png(mp.Ez, "-Zc dkbluered")), until=200)
#---------------------------------------------------------
'''
#---------------------------------------------------------
# FOR GENERATING THE TRANSMITTANCE SPECTRUM
nfreq = 1 # number of frequencies at which to compute flux
refl_fr1 = mp.FluxRegion(center=mp.Vector3(Lr1, 0),
size=mp.Vector3(
0, monitorheight)) # Reflected flux 1
refl_fr2 = mp.FluxRegion(center=mp.Vector3(Lr2, 0),
size=mp.Vector3(
0, monitorheight)) # Reflected flux 2
tran_fr = mp.FluxRegion(center=mp.Vector3(Lt, 0),
size=mp.Vector3(
0, monitorheight)) # Transmitted flux
su_fr = mp.FluxRegion(center=mp.Vector3(0, monitorheight / 2),
size=mp.Vector3(
a, 0)) # Flux loss above the waveguide
sd_fr = mp.FluxRegion(center=mp.Vector3(0, -monitorheight / 2),
size=mp.Vector3(
a, 0)) # Flux loss below the waveguide
# refl1 = sim.add_flux(fcen, df, nfreq, refl_fr1)
# refl2 = sim.add_flux(fcen, df, nfreq, refl_fr2)
# tran = sim.add_flux(fcen, df, nfreq, tran_fr)
# su = sim.add_flux(fcen, df, nfreq, su_fr)
# sd = sim.add_flux(fcen, df, nfreq, sd_fr)
# ------------------------ CODE FOR SEPARATING FUND AND FIRST ORDER MODE STARTS HERE ------------------------
refl_vals = []
tran_vals = []
def get_refl_slice(sim):
# print(sim.get_array(center=mp.Vector3(Lr1,0), size=mp.Vector3(0,H), component=mp.Ez, cmplx=True))
# refl_val = sim.get_array(center=mp.Vector3(Lr1,0), size=mp.Vector3(0,H), component=mp.Ez, cmplx=True)
refl_vals.append(
sim.get_array(center=mp.Vector3(Lr1, 0),
size=mp.Vector3(0,
monitorheight - 2 / resolution),
component=mp.Ez,
cmplx=True))
def get_tran_slice(sim):
# print(sim.get_array(center=mp.Vector3(Lt, 0), size=mp.Vector3(0,H), component=mp.Ez, cmplx=True))
# tran_val = sim.get_array(center=mp.Vector3(Lt, 0), size=mp.Vector3(0,H), component=mp.Ez, cmplx=True)
tran_vals.append(
sim.get_array(center=mp.Vector3(Lt, 0),
size=mp.Vector3(0,
monitorheight - 2 / resolution),
component=mp.Ez,
cmplx=True))
gif = True
if gif: # and w == 0.1:
sim.use_output_directory()
sim.run(mp.at_beginning(mp.output_epsilon),
mp.at_end(get_refl_slice),
mp.at_end(get_tran_slice),
until=100)
refl1 = sim.add_flux(fcen, df, nfreq, refl_fr1)
refl2 = sim.add_flux(fcen, df, nfreq, refl_fr2)
tran = sim.add_flux(fcen, df, nfreq, tran_fr)
su = sim.add_flux(fcen, df, nfreq, su_fr)
sd = sim.add_flux(fcen, df, nfreq, sd_fr)
# sim.run(mp.at_every(wavelength / 20, mp.output_efield_z), until=wavelength)
# sim.run(mp.at_every(wavelength/20 , mp.output_png(mp.Ez, "-RZc bluered -A notch-out/notch-eps-000000000.h5 -a gray:.2")), until=19*wavelength/20)
sim.run(mp.at_every(
wavelength / 20,
mp.output_png(
mp.Ez,
"-RZc bluered -A notch-out/notch-eps-000000.00.h5 -a gray:.2"
)),
until=19 * wavelength / 20)
sim.run(until=50)
else:
sim.run(mp.at_end(get_refl_slice),
mp.at_end(get_tran_slice),
until=100)
sim.run(until_after_sources=mp.stop_when_fields_decayed(
50, mp.Ez, mp.Vector3(), 1e-5))
os.system(
"h5topng notch-out/notch-eps-000000.00.h5; mv notch-out/notch-eps-000000.00.png "
+ case + "-" + str(int(w * 1000)) + "-" + str(mode) + "-eps.png")
os.system("cp notch-out/notch-ez-000100.00.png " + case + "-" +
str(int(w * 1000)) + "-" + str(mode) + ".png")
os.system("convert notch-out/notch-ez-*.png " + case + "-" +
str(int(w * 1000)) + "-" + str(mode) + ".gif")
# get_eigenmode(fcen, mp., refl_fr1, 1, kpoint)
# v = mp.volume(mp.vec(Lr1, -monitorheight/2), mp.vec(Lr1, monitorheight/2))
# mode = get_eigenmode(fcen, mp.X, v, v, 1, mp.vec(0, 0, 0), True, 0, 0, 1e-7, True)
# print(mode.amplitude)
# coef_refl_fund = mp.get_eigenmode_coefficients_and_kpoints(refl_fr1, 1, eig_parity=eig_parity_fund, eig_resolution=resolution, eig_tolerance=1e-7)
# coef_refl_first = mp.get_eigenmode_coefficients_and_kpoints(refl_fr1, 1, eig_parity=eig_parity_first, eig_resolution=resolution, eig_tolerance=1e-7)
#
# coef_tran_fund = mp.get_eigenmode_coefficients_and_kpoints(tran_fr, 1, eig_parity=eig_parity_fund, eig_resolution=resolution, eig_tolerance=1e-7)
# coef_tran_first = mp.get_eigenmode_coefficients_and_kpoints(tran_fr, 1, eig_parity=eig_parity_first, eig_resolution=resolution, eig_tolerance=1e-7)
ep = mp.ODD_Z
#coef_refl_fund, vgrp, kpoints_fund = sim.get_eigenmode_coefficients(refl1, [1], eig_parity=ep, eig_resolution=resolution, eig_tolerance=1e-7)
#coef_refl_first, vgrp, kpoints_first = sim.get_eigenmode_coefficients(refl1, [2], eig_parity=ep, eig_resolution=resolution, eig_tolerance=1e-7)
#coef_tran_fund, vgrp, kpoints_fund = sim.get_eigenmode_coefficients(tran, [1], eig_parity=ep, eig_resolution=resolution, eig_tolerance=1e-7)
#coef_tran_first, vgrp, kpoints_first = sim.get_eigenmode_coefficients(tran, [2], eig_parity=ep, eig_resolution=resolution, eig_tolerance=1e-7)
# print(kpoints_fund)
# print(kpoints_first)
# print(kpoints_fund[0])
# print(type(kpoints_fund[0]))
# print(dir(kpoints_fund[0]))
# n_eff_fund = wavelength*kpoints_fund[0].x
# n_eff_first = wavelength*kpoints_first[0].x
n_eff_fund = neff
n_eff_first = 1
print(n_eff_fund)
print(n_eff_first)
# print(coef_refl_fund)
# print(type(coef_refl_fund))
# print(dir(coef_refl_fund))
# print(coef_refl_fund[0])
# print(coef_refl_fund[0][0,0,:])
#
# fund_refl_amp = coef_refl_fund[0][0,0,1];
# first_order_refl_amp = coef_refl_first[0][0,0,1];
# fund_tran_amp = coef_tran_fund[0][0,0,0];
# first_order_tran_amp = coef_tran_first[0][0,0,0];
print("get_eigenmode_coefficients:\n")
#print(coef_refl_fund)
#print(coef_refl_first)
#print(coef_tran_fund)
#print(coef_tran_first)
print("\n")
# print(coef_refl_fund[0,0,:])
#fund_refl_amp = coef_refl_fund[0,0,1];
#first_order_refl_amp = coef_refl_first[0,0,1];
#fund_tran_amp = coef_tran_fund[0,0,0];
#first_order_tran_amp = coef_tran_first[0,0,0];
refl_val = refl_vals[0]
tran_val = tran_vals[0]
# n_eff must satisfy n_e <= n_eff <= n_c for the mode to be bound.
def fund_func(n_eff):
if n_eff >= n_c and n_eff <= n_e:
return sqrt(n_eff**2 - n_c**2) - sqrt(n_e**2 - n_eff**2) * tan(
pi * h / wavelength * sqrt(n_e**2 - n_eff**2))
def first_order_func(n_eff):
if n_eff >= n_c and n_eff <= n_e:
return sqrt(n_eff**2 - n_c**2) - sqrt(n_e**2 - n_eff**2) * tan(
pi * h / wavelength * sqrt(n_e**2 - n_eff**2) - pi / 2)
initial_guess = (n_c + n_e) / 2
# n_eff_fund = fsolve(fund_func, initial_guess)
# n_eff_first = fsolve(first_order_func, n_c)
print(n_eff_fund, n_eff_first)
assert (n_eff_fund > n_eff_first)
if len(n_eff_funds) == 0:
n_eff_funds.append(n_eff_fund)
if len(n_eff_firsts) == 0:
n_eff_firsts.append(n_eff_first)
ky0_fund = np.abs(2 * pi / wavelength * sqrt(n_e**2 - n_eff_fund**2))
ky0_first = np.abs(2 * pi / wavelength * sqrt(n_e**2 - n_eff_first**2))
ky1_fund = ky0_fund # np.abs(2 * pi / wavelength * sqrt(n_eff_fund **2 - n_c**2))
ky1_first = ky0_first # np.abs(2 * pi / wavelength * sqrt(n_eff_first**2 - n_c**2))
E_fund = lambda y: cos(ky0_fund * y) if np.abs(y) < h / 2 else cos(
ky0_fund * h / 2) * np.exp(-ky1_fund * (np.abs(y) - h / 2))
E_first_order = lambda y: sin(ky0_first * y) if np.abs(
y) < h / 2 else sin(ky0_first * h / 2) * np.exp(-ky1_first * (
np.abs(y) - h / 2)) * np.sign(y)
# y_list = np.arange(-H/2+.5/resolution, H/2-.5/resolution, 1/resolution)
#print("Y LIST: ", y_list)
#print("SIZE OF Y LIST: ", y_list.size)
E_fund_vec = np.zeros(y_list.size)
E_first_order_vec = np.zeros(y_list.size)
for index in range(y_list.size):
y = y_list[index]
E_fund_vec[index] = E_fund(y)
E_first_order_vec[index] = E_first_order(y)
# print(dir(sim))
# print(type(sim.get_eigenmode_coefficients))
# print(dir(sim.get_eigenmode_coefficients))
# print(type(sim.get_eigenmode))
# print(dir(sim.get_eigenmode))
# print(sim.get_eigenmode.__code__.co_varnames)
# print(sim.get_eigenmode.__defaults__)
# E1 = sim.get_eigenmode(fcen, mp.X, refl1.where, 1, None)
# E2 = sim.get_eigenmode(fcen, mp.X, refl1.where, 2, None)
# E3 = sim.get_eigenmode(fcen, mp.X, refl1.where, 3, None)
# E4 = sim.get_eigenmode(fcen, mp.X, refl1.where, 4, None)
# E1 = sim.get_eigenmode(fcen, mp.X, refl1.where, 1, mp.Vector3(0, 0, 0))
# E2 = sim.get_eigenmode(fcen, mp.X, refl1.where, 2, mp.Vector3(0, 0, 0))
# E3 = sim.get_eigenmode(fcen, mp.X, refl1.where, 3, mp.Vector3(0, 0, 0))
# E4 = sim.get_eigenmode(fcen, mp.X, refl1.where, 4, mp.Vector3(0, 0, 0))
# print(refl1.where)
# numEA = 0
# E1 = sim.fields.get_eigenmode(fcen, mp.X, refl1.where, refl1.where, 1, mp.vec(0,0,0), True, 0, numEA, 1e-7, True)
# print(type(E1))
# print(dir(E1))
#
# print(refl1.where)
# # print(E1, E2, E3, E4)
# print(E1.amplitude, E1.band_num, E1.group_velocity, E1.k)
# print(type(E1.amplitude))
# print(dir(E1.amplitude))
# print(doc(E1.amplitude))
# print(self(E1.amplitude))
# print(E1.amplitude(y_list))
# print(type(E1.amplitude(y_list)))
# print(dir(E1.amplitude(y_list)))
# print(E1.amplitude, E2.amplitude, E3.amplitude, E4.amplitude)
# E1 = sim.get_eigenmode(fcen, mp.X, refl1.where, refl1.where, 1, mp.vec(0, 0, 0))
# E2 = sim.get_eigenmode(fcen, mp.X, refl1.where, refl1.where, 2, mp.vec(0, 0, 0))
# E3 = sim.get_eigenmode(fcen, mp.X, refl1.where, refl1.where, 3, mp.vec(0, 0, 0))
# E4 = sim.get_eigenmode(fcen, mp.X, refl1.where, refl1.where, 4, mp.vec(0, 0, 0))
# print(y_list)
#
# E1a = np.zeros(y_list.size, dtype='Complex128');
# E2a = np.zeros(y_list.size, dtype='Complex128');
# E3a = np.zeros(y_list.size, dtype='Complex128');
# E4a = np.zeros(y_list.size, dtype='Complex128');
#
# # print(mp.eigenmode_amplitude.__code__.co_varnames)
# # print(mp.eigenmode_amplitude.__defaults__)
#
# for i in range(y_list.size):
# # print(E1)
# # print(E1.swigobj)
# # print(E1.amplitude)
# # print(mp.vec(Lr1, y_list[i], 0))
# # print(mp.Vector3(Lr1, y_list[i], 0))
# # print(mp.Ez)
# # E1a[i] = mp.eigenmode_amplitude(E1.swigobj, mp.vec(Lr1, y_list[i], 0), mp.Ez);
# eval_point = mp.vec(Lr1, y_list[i], 0)
# # print(eval_point)
# E1a[i] = mp.eigenmode_amplitude(E1.swigobj, eval_point, mp.Ex)
# E2a[i] = mp.eigenmode_amplitude(E2.swigobj, eval_point, mp.Ex)
# E3a[i] = mp.eigenmode_amplitude(E3.swigobj, eval_point, mp.Ex)
# E4a[i] = mp.eigenmode_amplitude(E4.swigobj, eval_point, mp.Ex)
# # E1a[i] = mp.eigenmode_amplitude(E1.amplitude, mp.Vector3(Lr1, y_list[i], 0), mp.Ez);
#
# plt.plot(y_list, np.abs(E1a)**2, 'bo-', label='E1')
# plt.plot(y_list, np.abs(E2a)**2, 'ro-', label='E2')
# plt.plot(y_list, np.abs(E3a)**2, 'go-', label='E3')
# plt.plot(y_list, np.abs(E4a)**2, 'co-', label='E4')
# # plt.axis([40.0, 300.0, 0.0, 100.0])
# plt.xlabel("y (um)")
# plt.ylabel("Field (a.u.)")
# plt.legend(loc="center right")
# plt.show()
# print("r VECTOR: ", refl_val)
# print("t VECTOR: ", tran_val)
# print("E0 VECTOR: ", E_fund_vec)
# print("E1 VECTOR: ", E_first_order_vec)
# fund_refl_amp_2 = np.conj(np.dot(refl_val, E_fund_vec) / np.dot(E_fund_vec, E_fund_vec)) # Conjugate becasue MEEP uses physics exp(kz-wt) rather than engineering exp(wt-kz)
# first_order_refl_amp_2 = np.conj(np.dot(refl_val, E_first_order_vec) / np.dot(E_first_order_vec, E_first_order_vec))
# fund_tran_amp_2 = np.conj(np.dot(tran_val, E_fund_vec) / np.dot(E_fund_vec, E_fund_vec))
# first_order_tran_amp_2 = np.conj(np.dot(tran_val, E_first_order_vec) / np.dot(E_first_order_vec, E_first_order_vec))
fund_refl_amp = np.conj(
np.dot(refl_val, E0) / np.dot(E0, E0)
) # Conjugate becasue MEEP uses physics exp(kz-wt) rather than engineering exp(wt-kz)
first_order_refl_amp = 0 # np.conj(np.dot(refl_val, E1[:,2]) / np.dot(E1[:,2], E1[:,2]))
fund_tran_amp = np.conj(np.dot(tran_val, E0) / np.dot(E0, E0))
first_order_tran_amp = 0 # np.conj(np.dot(tran_val, E1[:,2]) / np.dot(E1[:,2], E1[:,2]))
fund_refl = np.conj(fund_refl_amp) * E0
not_fund_refl = refl_val - fund_refl
fund_tran = np.conj(fund_tran_amp) * E0
not_fund_tran = tran_val - fund_tran
fund_refl_power = np.dot(np.conj(fund_refl), fund_refl)
not_fund_refl_power = np.dot(np.conj(not_fund_refl), not_fund_refl)
fund_tran_power = np.dot(np.conj(fund_tran), fund_tran)
not_fund_tran_power = np.dot(np.conj(not_fund_tran), not_fund_tran)
fund_refl_ratio = np.abs(fund_refl_power /
(fund_refl_power + not_fund_refl_power))
first_order_refl_ratio = 0
fund_tran_ratio = np.abs(fund_tran_power /
(fund_tran_power + not_fund_tran_power))
first_order_tran_ratio = 0
# plt.plot(y_list, np.abs(refl_val), 'bo-',label='reflectance')
# plt.plot(y_list, np.abs(tran_val), 'ro-',label='transmittance')
# plt.plot(y_list, E0, 'go-',label='E0')
# plt.plot(y_list, fund_refl_amp*E0, 'co-',label='over')
# # plt.axis([40.0, 300.0, 0.0, 100.0])
# plt.xlabel("y (um)")
# plt.ylabel("Field")
# plt.legend(loc="center right")
# plt.show()
#
# print("\n")
#
# print(tran_val.size, refl_val.size)
#
# print("\n")
#
# print(tran_val, refl_val, E0)
#
# print("\n")
# # print(np.conj(tran_val), tran_val, E1[:,2])
# #
# # print(np.conj(refl_val), refl_val, E1[:,2])
#
# refl_tot_power = np.abs(np.dot(np.conj(refl_val), refl_val))
# tran_tot_power = np.abs(np.dot(np.conj(tran_val), tran_val))
#
# print(fund_refl_amp, refl_tot_power, fund_tran_amp, tran_tot_power)
# print(fund_refl_amp , fund_refl_amp_2 )
# print(first_order_refl_amp , first_order_refl_amp_2)
# print(fund_tran_amp , fund_tran_amp_2 )
# print(first_order_tran_amp , first_order_tran_amp_2)
#
# print(np.angle(fund_refl_amp), np.angle(fund_refl_amp_2))
# print(np.angle(first_order_refl_amp), np.angle(first_order_refl_amp_2))
# print(np.angle(fund_tran_amp), np.angle(fund_tran_amp_2))
# print(np.angle(first_order_tran_amp), np.angle(first_order_tran_amp_2))
# fund_refl_power = np.abs(fund_tran_amp) ** 2
# fund_refl_power = np.abs(fund_refl_amp) ** 2
# first_order_refl_power = np.abs(first_order_refl_amp) ** 2
# fund_tran_power = np.abs(fund_tran_amp) ** 2
# first_order_tran_power = np.abs(first_order_tran_amp) ** 2
# print(fund_refl_power, first_order_refl_power, fund_tran_power, first_order_tran_power)
# fund_refl_ratio = fund_refl_power / (fund_refl_power + first_order_refl_power)
# first_order_refl_ratio = first_order_refl_power / (fund_refl_power + first_order_refl_power)
# fund_tran_ratio = fund_tran_power / (fund_tran_power + first_order_tran_power)
# first_order_tran_ratio = first_order_tran_power / (fund_tran_power + first_order_tran_power)
# fund_refl_power = np.abs(fund_refl_amp) ** 2
# first_order_refl_power = np.abs(first_order_refl_amp) ** 2
# fund_tran_power = np.abs(fund_tran_amp) ** 2
# first_order_tran_power = np.abs(first_order_tran_amp) ** 2
#
# fund_refl_ratio = fund_refl_power / refl_tot_power
# first_order_refl_ratio = first_order_refl_power / refl_tot_power
# fund_tran_ratio = fund_tran_power / tran_tot_power
# first_order_tran_ratio = first_order_tran_power / tran_tot_power
#
# fund_refl_ratio = 1
# first_order_refl_ratio = 0
# fund_tran_ratio = 1
# first_order_tran_ratio = 0
print("Percentage of reflected light in fundamental mode: ",
fund_refl_ratio * 100)
print("Percentage of reflected light in first order mode: ",
first_order_refl_ratio * 100)
print("Percentage of transmitted light in fundamental mode: ",
fund_tran_ratio * 100)
print("Percentage of transmitted light in first order mode: ",
first_order_tran_ratio * 100)
# ------------------------ CODE FOR SEPARATING FUND AND FIRST ORDER MODE ENDS HERE ------------------------
wl = [] #list of wavelengths
refl1_flux = mp.get_fluxes(refl1)
refl2_flux = mp.get_fluxes(refl2)
tran_flux = mp.get_fluxes(tran)
su_flux = mp.get_fluxes(su)
sd_flux = mp.get_fluxes(sd)
flux_freqs = mp.get_flux_freqs(refl1)
for i in range(nfreq):
wl = np.append(wl, 1 / flux_freqs[i])
print(1 / flux_freqs[i])
# for ind, elt in enumerate(wl):
# #print(round(elt, 4))
# if round(elt, 3) == 0.637:
# #print("ALERT: MATCH FOUND")
# index = ind
index = 0
rp = refl1_flux[index]
tp = tran_flux[index]
# print("rp/tp:\n")
# print(rp)
# print(tp)
# print("\n")
R = -refl1_flux[index] / (refl2_flux[index] - refl1_flux[index])
T = tran_flux[index] / (refl2_flux[index] - refl1_flux[index])
S = (refl2_flux[index] - tran_flux[index]) / (refl2_flux[index] -
refl1_flux[index])
Su = su_flux[index] / (refl2_flux[index] - refl1_flux[index])
Sd = -sd_flux[index] / (refl2_flux[index] - refl1_flux[index])
S_correction = (1 - R - T) / (Su + Sd)
# print(R, T, S, Su, Sd)
r = sqrt(R)
t = sqrt(T)
# The amplitude ... times the phase ... accounting for the distance to the detector (Reverse exp(-kz) of phase).
# r_fund = (r * fund_refl_ratio) * (fund_refl_amp / np.abs(fund_refl_amp)) * (np.exp( 2j*pi * (-Lr1 - w/2) * n_eff_fund / wavelength)) # Lr1 is negative because it is the (negative) position of the monitor, not the distace from the monitor to the center.
# r_first = (r * first_order_refl_ratio) * (first_order_refl_amp / np.abs(first_order_refl_amp)) * (np.exp( 2j*pi * (-Lr1 - w/2) * n_eff_first / wavelength))
# t_fund = (t * fund_tran_ratio) * (fund_tran_amp / np.abs(fund_tran_amp)) * (np.exp( 2j*pi * ( Lt - w/2) * n_eff_fund / wavelength))
# t_first = (t * first_order_tran_ratio) * (first_order_tran_amp / np.abs(first_order_tran_amp)) * (np.exp( 2j*pi * ( Lt - w/2) * n_eff_first / wavelength))
r_fund = (r * fund_refl_ratio) * np.exp(
1j * np.angle(fund_refl_amp) + 2j * pi *
(-Lr1 - w / 2) * n_eff_fund / wavelength
) # Lr1 is negative because it is the (negative) position of the monitor, not the distace from the monitor to the center.
r_first = (r * first_order_refl_ratio
) * np.exp(1j * np.angle(first_order_refl_amp) + 2j * pi *
(-Lr1 - w / 2) * n_eff_first / wavelength)
t_fund = (t * fund_tran_ratio
) * np.exp(1j * np.angle(fund_tran_amp) + 2j * pi *
(Lt - w / 2) * n_eff_fund / wavelength)
t_first = (t * first_order_tran_ratio
) * np.exp(1j * np.angle(first_order_tran_amp) + 2j * pi *
(Lt - w / 2) * n_eff_first / wavelength)
if mode == 0:
r00 = r_fund
r01 = r_first
t00 = t_fund
t01 = t_first
su0 = sqrt(np.abs(Su * S_correction))
sd0 = sqrt(np.abs(Sd * S_correction))
# su0 = sqrt(Su)
# sd0 = sqrt(Sd)
r00s.append(r00)
r01s.append(r01)
t00s.append(t00)
t01s.append(t01)
su0s.append(su0)
sd0s.append(sd0)
if only_fund:
r10s.append(0)
r11s.append(0)
t10s.append(0)
t11s.append(1)
su1s.append(0)
sd1s.append(0)
else:
r10 = r_fund
r11 = r_first
t10 = t_fund
t11 = t_first
su1 = sqrt(np.abs(Su * S_correction))
sd1 = sqrt(np.abs(Sd * S_correction))
# su1 = sqrt(Su)
# sd1 = sqrt(Sd)
r10s.append(r10)
r11s.append(r11)
t10s.append(t10)
t11s.append(t11)
su1s.append(su1)
sd1s.append(sd1)
norm_Su = S * Su / (Su + Sd)
NET = round((R + T + S) * 100, 0)
if NET > 100.0:
NET = 100.0
NET_LOSS = round((Su + Sd) / S * 100, 0)
if NET_LOSS > 100.0:
NET_LOSS = 100.0
'''
np.append(ws, [w * 1000])
np.append(Rs, [R * 100])
np.append(Ts, [T * 100])
np.append(Ss, [S * 100])
np.append(NET_LIST, [NET])
np.append(Sus, [Su * 100])
np.append(Sds, [Sd * 100])
np.append(NET_LOSS_LIST, [NET_LOSS])
np.append(norm_Sus, [norm_Su * 100])
'''
if mode == 0:
ws.append(w * 1000)
Rs.append(R * 100)
Ts.append(T * 100)
Ss.append(S * 100)
NET_LIST.append(NET)
Sus.append(Su * 100)
Sds.append(Sd * 100)
NET_LOSS_LIST.append(NET_LOSS)
norm_Sus.append(norm_Su * 100)
if mode == 0:
f1.write("--------------------------------------------------- \n")
f1.write("Notch Width: %s nanometers \n" % (w * 1000))
f1.write("Reflection Percentage: %s\n" % (R * 100))
f1.write("Transmission Percentage: %s\n" % (T * 100))
f1.write("Total Loss Percentage: %s\n" % (S * 100))
f1.write("Percentage of Light Accounted For: %s\n" % (NET))
f1.write("Upper Loss Percentage: %s\n" % (Su * 100))
f1.write("Lower Loss Percentage: %s\n" % (Sd * 100))
f1.write("Percentage of Total Loss Accounted For: %s\n" %
(NET_LOSS))
f1.write("Normalized Upper Loss Percentage: %s\n" %
(norm_Su * 100))
f1.write("\n \n")
f1.write("FUNDAMENTAL MODE \n")
f1.write("n_eff: %s\n" % (n_eff_fund))
f1.write("Re(r00): %s\n" % (np.real(r00)))
f1.write("Im(r00): %s\n" % (np.imag(r00)))
f1.write("Re(r01): %s\n" % (np.real(r01)))
f1.write("Im(r01): %s\n" % (np.imag(r01)))
f1.write("Re(t00): %s\n" % (np.real(t00)))
f1.write("Im(t00): %s\n" % (np.imag(t00)))
f1.write("Re(t01): %s\n" % (np.real(t01)))
f1.write("Im(t01): %s\n" % (np.imag(t01)))
f1.write("Re(su0): %s\n" % (np.real(su0)))
f1.write("Im(su0): %s\n" % (np.imag(su0)))
f1.write("Re(sd0): %s\n" % (np.real(sd0)))
f1.write("Im(sd0): %s\n" % (np.imag(sd0)))
f1.write("\n")
else:
f1.write("FIRST ORDER MODE \n")
f1.write("n_eff: %s\n" % (n_eff_first))
f1.write("Re(r10): %s\n" % (np.real(r10)))
f1.write("Im(r10): %s\n" % (np.imag(r10)))
f1.write("Re(r11): %s\n" % (np.real(r11)))
f1.write("Im(r11): %s\n" % (np.imag(r11)))
f1.write("Re(t10): %s\n" % (np.real(t10)))
f1.write("Im(t10): %s\n" % (np.imag(t10)))
f1.write("Re(t11): %s\n" % (np.real(t11)))
f1.write("Im(t11): %s\n" % (np.imag(t11)))
f1.write("Re(su1): %s\n" % (np.real(su1)))
f1.write("Im(su1): %s\n" % (np.imag(su1)))
f1.write("Re(sd1): %s\n" % (np.real(sd1)))
f1.write("Im(sd1): %s\n" % (np.imag(sd1)))
f1.write("--------------------------------------------------- \n")
sim.reset_meep()
sd_fr = mp.FluxRegion(center=mp.Vector3(0, -monitorheight / 2),
size=mp.Vector3(scatter_monitor_size, 0))
if resolution <= 50:
epsform = "eps-000000.00"
else:
epsform = "eps-000000000"
sim.use_output_directory(outputdir)
# Simulation run for TRANSIENT state
sim.run(mp.at_beginning(mp.output_epsilon),
mp.at_every(
1,
mp.output_png(
mp.Ez, "-RZc bluered -A " + outputdir +
"/grating_validation-" + epsform + ".h5 -a gray:.2")),
until=T)
if farfield_bool:
os.system("convert " + outputdir + "/grating_validation-ez-*.png " +
outputdir + "/N=" + str(num_notches) +
"-FarfieldTransient.gif")
else:
os.system("convert " + outputdir + "/grating_validation-ez-*.png " +
outputdir + "/N=" + str(num_notches) +
"-NearfieldTransient.gif")
os.system("rm " + outputdir + "/grating_validation-ez-*.png")
# Delete after printing output
pml_layers = [mp.PML(1.0)]
force_complex_fields = True # so we can get time-average flux
resolution = 10
sim = mp.Simulation(cell_size=cell,
geometry=geometry,
sources=sources,
boundary_layers=pml_layers,
force_complex_fields=force_complex_fields,
resolution=resolution)
sim.run(mp.at_beginning(mp.output_epsilon),
mp.at_end(
mp.output_png(mp.Ez,
"-a yarg -A $EPS -S3 -Zc dkbluered",
rm_h5=False)),
until=200)
flux1 = sim.flux_in_box(
mp.X, mp.Volume(center=mp.Vector3(-6.0), size=mp.Vector3(1.8, 6)))
flux2 = sim.flux_in_box(
mp.X, mp.Volume(center=mp.Vector3(6.0), size=mp.Vector3(1.8, 6)))
# averaged over y region of width 1.8
print("left-going flux = {}".format(flux1 / -1.8))
# averaged over y region of width 1.8
print("right-going flux = {}".format(flux2 / 1.8))
pml_layers = [mp.PML(1.0)]
force_complex_fields = True # so we can get time-average flux
resolution = 10
sim = mp.Simulation(
cell_size=cell,
geometry=geometry,
sources=sources,
boundary_layers=pml_layers,
force_complex_fields=force_complex_fields,
resolution=resolution
)
sim.run(
mp.at_beginning(mp.output_epsilon),
mp.at_end(mp.output_png(mp.Ez, "-a yarg -A $EPS -S3 -Zc dkbluered", rm_h5=False)),
until=200
)
flux1 = sim.flux_in_box(mp.X, mp.Volume(center=mp.Vector3(-6.0), size=mp.Vector3(1.8, 6)))
flux2 = sim.flux_in_box(mp.X, mp.Volume(center=mp.Vector3(6.0), size=mp.Vector3(1.8, 6)))
# averaged over y region of width 1.8
print("left-going flux = {}".format(flux1 / -1.8))
# averaged over y region of width 1.8
print("right-going flux = {}".format(flux2 / 1.8))
## moving point charge with superluminal phase velocity in dielectric media emitting Cherenkov radiation
import meep as mp
sx = 60
sy = 60
cell_size = mp.Vector3(sx,sy,0)
dpml = 1.0
pml_layers = [mp.PML(thickness=dpml)]
v = 0.7 # velocity of point charge
symmetries = [mp.Mirror(direction=mp.Y)]
sim = mp.Simulation(resolution=10,
cell_size=cell_size,
default_material=mp.Medium(index=1.5),
symmetries=symmetries,
boundary_layers=pml_layers)
def move_source(sim):
sim.change_sources([mp.Source(mp.ContinuousSource(frequency=1e-10),
component=mp.Ex,
center=mp.Vector3(-0.5*sx+dpml+v*sim.meep_time()))])
sim.run(move_source,
mp.at_every(2, mp.output_png(mp.Hz, "-vZc dkbluered -M 1")),
until=sx/v)
'''
def inPlaceGifCreation(compressGIFBool=True, compressGIFScale=0.5 ,deletePNGBool=True,generateGIF=True,deleteUncompressedGIF=False):
pngToGIF()
if(compressGIFBool==True):
compressGIF(scalingFactor=compressGIFScale)
if(deletePNGBool==True):
deletePNG()
def removeH5Files():
pass
if __name__=="__main__":
#cell, geometry, sources, pml_layers = createDiffractionSlit()
cell , geometry , sources , pml_layers = createDiffractionGrating()
resolution = globalVariables.resolution
sim = mp.Simulation(cell_size=cell,
boundary_layers=pml_layers,
geometry=geometry,
sources=sources,
resolution=resolution)
sim.use_output_directory()
#sim.run(mp.at_beginning(mp.output_epsilon),
# mp.to_appended("ez", mp.at_every(0.6, mp.output_png(mp.Ez,"-Zc dkbluered"))),
# until=200)
sim.run(mp.at_every(0.6 , mp.output_png(mp.Ez, "-Zc dkbluered")), until=200)
plot_data(sim,cell)
inPlaceGifCreation()
def notch(w):
print("#----------------------------------------")
print("NOTCH WIDTH: %s nanometers" % (w * 1000))
print("#----------------------------------------")
# w is the width of the notch in the waveguide
#Waveguide Math
e = 0.4 # etch fraction [0 -> 1]
h2 = h * (1 - e) #height of the etched region
d = 1 #spacing of the waveguides
posd = d / 2 #pos half d
negd = -d / 2 #neg half d
ang = 80 #angle of the sidewall
angrad = ang * pi / 180
bottomoffset = h / tan(angrad)
c = bottomoffset / 2
r = sqrt(bottomoffset**2 + h**2)
fcen = 1 / wavelength
df = 0.05
n_e = 2.2012 # refractive index inside waveguide (at wavelength 0.6372)
n_c = 1.4569 # refractive index outside waveguide (at wavelength 0.6372)
#Waveguide Geometry
cell = mp.Vector3(a, H)
default_material = mp.Medium(epsilon=n_c**2)
core_material = mp.Medium(epsilon=n_e**2)
geometry = [
mp.Block(cell, center=mp.Vector3(0, 0), material=default_material),
mp.Block(mp.Vector3(a + 2 * h, h),
center=mp.Vector3(0, 0),
material=core_material),
# mp.Block(mp.Vector3(w, e * h),
mp.Block(mp.Vector3(w, e * h),
center=mp.Vector3(0, h2 / 2),
material=default_material)
]
# pml_layers = [mp.PML(0.2)]
pml_layers = [mp.Absorber(thickness=pmlthickness)]
# resolution = 50
r00 = None
r01 = None
r10 = None
r11 = None
t00 = None
t01 = None
t10 = None
t11 = None
su0 = None
sd0 = None
su1 = None
sd1 = None
only_fund = True
modes = [0, 1]
if only_fund:
modes = [0]
# for mode in [0, 1]:
for mode in modes:
if mode == 0:
eig_parity = mp.EVEN_Y # Fundamental
print("-----------")
print("MODE TYPE: FUNDAMENTAL")
else:
eig_parity = mp.ODD_Y # First Order
print("-----------")
print("MODE TYPE: FIRST ORDER")
sources = [
mp.EigenModeSource(mp.GaussianSource(frequency=fcen, fwidth=df),
size=mp.Vector3(0, H),
center=mp.Vector3(Ls, 0),
eig_parity=eig_parity)
]
sim = mp.Simulation(cell_size=cell,
boundary_layers=pml_layers,
geometry=geometry,
sources=sources,
resolution=resolution,
force_complex_fields=True)
'''
#--------------------------------------------------
#FOR DISPLAYING THE GEOMETRY
sim.run(until = 200)
eps_data = sim.get_array(center=mp.Vector3(), size=cell, component=mp.Dielectric)
plt.figure(dpi=100)
plt.imshow(eps_data.transpose(), interpolation='spline36', cmap='binary')
#plt.axis('off')
plt.show()
quit()
#----------------------------------------------------
'''
'''
#------------------------------------------------------
#FOR GENERATING THE ELECTRIC FIELD GIF
#Note: After running this program, write the following commands in Terminal:
# $ source deactivate mp
# $ cd notch-out/
# $ python ../NotchIP.py
sim.use_output_directory()
sim.run(mp.at_beginning(mp.output_epsilon),
mp.to_appended("ez", mp.at_every(0.6, mp.output_efield_z)),
until = 200)
#sim.run(mp.at_every(0.6 , mp.output_png(mp.Ez, "-Zc dkbluered")), until=200)
#---------------------------------------------------------
'''
#---------------------------------------------------------
# FOR GENERATING THE TRANSMITTANCE SPECTRUM
nfreq = 20 # number of frequencies at which to compute flux
refl_fr1 = mp.FluxRegion(center=mp.Vector3(Lr1, 0),
size=mp.Vector3(
0, monitorheight)) # Reflected flux 1
refl_fr2 = mp.FluxRegion(center=mp.Vector3(Lr2, 0),
size=mp.Vector3(
0, monitorheight)) # Reflected flux 2
tran_fr = mp.FluxRegion(center=mp.Vector3(Lt, 0),
size=mp.Vector3(
0, monitorheight)) # Transmitted flux
su_fr = mp.FluxRegion(center=mp.Vector3(0, monitorheight / 2),
size=mp.Vector3(
a, 0)) # Flux loss above the waveguide
sd_fr = mp.FluxRegion(center=mp.Vector3(0, -monitorheight / 2),
size=mp.Vector3(
a, 0)) # Flux loss below the waveguide
refl1 = sim.add_flux(fcen, df, nfreq, refl_fr1)
refl2 = sim.add_flux(fcen, df, nfreq, refl_fr2)
tran = sim.add_flux(fcen, df, nfreq, tran_fr)
su = sim.add_flux(fcen, df, nfreq, su_fr)
sd = sim.add_flux(fcen, df, nfreq, sd_fr)
# ------------------------ CODE FOR SEPARATING FUND AND FIRST ORDER MODE STARTS HERE ------------------------
y_list = np.arange(-H / 2, H / 2, 1 / resolution)
refl_vals = []
tran_vals = []
def get_refl_slice(sim):
# print(sim.get_array(center=mp.Vector3(Lr1,0), size=mp.Vector3(0,H), component=mp.Ez, cmplx=True))
# refl_val = sim.get_array(center=mp.Vector3(Lr1,0), size=mp.Vector3(0,H), component=mp.Ez, cmplx=True)
refl_vals.append(
sim.get_array(center=mp.Vector3(Lr1, 0),
size=mp.Vector3(0, H),
component=mp.Ez,
cmplx=True))
def get_tran_slice(sim):
# print(sim.get_array(center=mp.Vector3(Lt, 0), size=mp.Vector3(0,H), component=mp.Ez, cmplx=True))
# tran_val = sim.get_array(center=mp.Vector3(Lt, 0), size=mp.Vector3(0,H), component=mp.Ez, cmplx=True)
tran_vals.append(
sim.get_array(center=mp.Vector3(Lt, 0),
size=mp.Vector3(0, H),
component=mp.Ez,
cmplx=True))
pt = mp.Vector3(9.75, 0) # Hardcoded?
gif = True
if gif: # and w == 0.1:
sim.use_output_directory()
sim.run(mp.at_beginning(mp.output_epsilon),
mp.at_end(get_refl_slice),
mp.at_end(get_tran_slice),
until=100)
# sim.run(mp.at_every(wavelength / 20, mp.output_efield_z), until=wavelength)
sim.run(mp.at_every(
wavelength / 20,
mp.output_png(
mp.Ez,
"-RZc bluered -A notch-out/notch-eps-000000.00.h5 -a gray:.2"
)),
until=19 * wavelength / 20)
sim.run(until_after_sources=mp.stop_when_fields_decayed(
50, mp.Ez, pt, 1e-3))
else:
sim.run(mp.at_beginning(mp.output_epsilon),
mp.at_time(100, get_refl_slice),
mp.at_time(100, get_tran_slice),
until_after_sources=mp.stop_when_fields_decayed(
50, mp.Ez, pt, 1e-3))
os.system("cp notch-out/notch-ez-000100.00.png " + str(int(w * 1000)) +
"-" + str(mode) + ".png")
os.system("convert notch-out/notch-ez-*.png " + str(int(w * 1000)) +
"-" + str(mode) + ".gif")
refl_val = refl_vals[0]
tran_val = tran_vals[0]
# n_eff must satisfy n_e <= n_eff <= n_c for the mode to be bound.
def fund_func(n_eff):
if n_eff >= n_c and n_eff <= n_e:
return sqrt(n_eff**2 - n_c**2) - sqrt(n_e**2 - n_eff**2) * tan(
pi * h / wavelength * sqrt(n_e**2 - n_eff**2))
def first_order_func(n_eff):
if n_eff >= n_c and n_eff <= n_e:
return sqrt(n_eff**2 - n_c**2) - sqrt(n_e**2 - n_eff**2) * tan(
pi * h / wavelength * sqrt(n_e**2 - n_eff**2) - pi / 2)
initial_guess = (n_c + n_e) / 2
n_eff_fund = fsolve(fund_func, initial_guess)
n_eff_first = fsolve(first_order_func, n_c)
print(n_eff_fund, n_eff_first)
assert (n_eff_fund > n_eff_first)
if len(n_eff_funds) == 0:
n_eff_funds.append(n_eff_fund[0])
if len(n_eff_firsts) == 0:
n_eff_firsts.append(n_eff_first[0])
ky0_fund = np.absolute(2 * pi / wavelength *
sqrt(n_e**2 - n_eff_fund**2))
ky0_first = np.absolute(2 * pi / wavelength *
sqrt(n_e**2 - n_eff_first**2))
ky1_fund = np.absolute(2 * pi / wavelength *
sqrt(n_eff_fund**2 - n_c**2))
ky1_first = np.absolute(2 * pi / wavelength *
sqrt(n_eff_first**2 - n_c**2))
E_fund = lambda y: cos(ky0_fund * y) if np.absolute(
y) < h / 2 else cos(ky0_fund * h / 2) * np.exp(-ky1_fund * (
np.absolute(y) - h / 2))
E_first_order = lambda y: sin(ky0_first * y) if np.absolute(
y) < h / 2 else sin(ky0_first * h / 2) * np.exp(-ky1_first * (
np.absolute(y) - h / 2)) * np.sign(y)
# y_list = np.arange(-H/2+.5/resolution, H/2-.5/resolution, 1/resolution)
#print("Y LIST: ", y_list)
#print("SIZE OF Y LIST: ", y_list.size)
E_fund_vec = np.zeros(y_list.size)
E_first_order_vec = np.zeros(y_list.size)
for index in range(y_list.size):
y = y_list[index]
E_fund_vec[index] = E_fund(y)
E_first_order_vec[index] = E_first_order(y)
# print("r VECTOR: ", refl_val)
# print("t VECTOR: ", tran_val)
# print("E0 VECTOR: ", E_fund_vec)
# print("E1 VECTOR: ", E_first_order_vec)
# plt.plot(y_list, refl_val*100,'bo-',label='reflectance')
# plt.plot(y_list, tran_val*1,'ro-',label='transmittance')
# plt.plot(y_list, E_fund_vec,'go-',label='E0')
# plt.plot(y_list, E_first_order_vec, 'co-', label='E1')
# # plt.axis([40.0, 300.0, 0.0, 100.0])
# plt.xlabel("y (um)")
# plt.ylabel("Field")
# plt.legend(loc="center right")
# plt.show()
fund_refl_amp = np.conj(
np.dot(refl_val, E_fund_vec) / np.dot(E_fund_vec, E_fund_vec)
) # Conjugate becasue MEEP uses physics exp(kz-wt) rather than engineering exp(wt-kz)
first_order_refl_amp = np.conj(
np.dot(refl_val, E_first_order_vec) /
np.dot(E_first_order_vec, E_first_order_vec))
fund_tran_amp = np.conj(
np.dot(tran_val, E_fund_vec) / np.dot(E_fund_vec, E_fund_vec))
first_order_tran_amp = np.conj(
np.dot(tran_val, E_first_order_vec) /
np.dot(E_first_order_vec, E_first_order_vec))
# fund_refl_power = np.abs(fund_tran_amp) ** 2
fund_refl_power = np.abs(fund_refl_amp)**2
first_order_refl_power = np.abs(first_order_refl_amp)**2
fund_tran_power = np.abs(fund_tran_amp)**2
first_order_tran_power = np.abs(first_order_tran_amp)**2
print(fund_refl_power, first_order_refl_power, fund_tran_power,
first_order_tran_power)
fund_refl_ratio = fund_refl_power / (fund_refl_power +
first_order_refl_power)
first_order_refl_ratio = first_order_refl_power / (
fund_refl_power + first_order_refl_power)
fund_tran_ratio = fund_tran_power / (fund_tran_power +
first_order_tran_power)
first_order_tran_ratio = first_order_tran_power / (
fund_tran_power + first_order_tran_power)
print("Percentage of reflected light in fundamental mode: ",
fund_refl_ratio * 100)
print("Percentage of reflected light in first order mode: ",
first_order_refl_ratio * 100)
print("Percentage of transmitted light in fundamental mode: ",
fund_tran_ratio * 100)
print("Percentage of transmitted light in first order mode: ",
first_order_tran_ratio * 100)
# ------------------------ CODE FOR SEPARATING FUND AND FIRST ORDER MODE ENDS HERE ------------------------
wl = [] #list of wavelengths
refl1_flux = mp.get_fluxes(refl1)
refl2_flux = mp.get_fluxes(refl2)
tran_flux = mp.get_fluxes(tran)
su_flux = mp.get_fluxes(su)
sd_flux = mp.get_fluxes(sd)
flux_freqs = mp.get_flux_freqs(refl1)
for i in range(nfreq):
wl = np.append(wl, 1 / flux_freqs[i])
print(1 / flux_freqs[i])
for ind, elt in enumerate(wl):
#print(round(elt, 4))
if round(elt, 3) == 0.637:
#print("ALERT: MATCH FOUND")
index = ind
R = -refl1_flux[index] / (refl2_flux[index] - refl1_flux[index])
T = tran_flux[index] / (refl2_flux[index] - refl1_flux[index])
S = (refl2_flux[index] - tran_flux[index]) / (refl2_flux[index] -
refl1_flux[index])
Su = su_flux[index] / (refl2_flux[index] - refl1_flux[index])
Sd = -sd_flux[index] / (refl2_flux[index] - refl1_flux[index])
S_correction = (1 - R - T) / (Su + Sd)
print(R, T, S, Su, Sd)
r = sqrt(R)
t = sqrt(T)
# The amplitude ... times the phase ... accounting for the distance to the detector (Reverse exp(-kz) of phase).
r_fund = (r * fund_refl_ratio) * (
fund_refl_amp / np.abs(fund_refl_amp)
) * (
np.exp(2j * pi * (-Lr1 - w / 2) * n_eff_fund / wavelength)
) # Lr1 is negative because it is the (negative) position of the monitor, not the distace from the monitor to the center.
r_first = (r * first_order_refl_ratio) * (
first_order_refl_amp / np.abs(first_order_refl_amp)) * (np.exp(
2j * pi * (-Lr1 - w / 2) * n_eff_first / wavelength))
t_fund = (t * fund_tran_ratio) * (
fund_tran_amp / np.abs(fund_tran_amp)) * (np.exp(
2j * pi * (Lt - w / 2) * n_eff_fund / wavelength))
t_first = (t * first_order_tran_ratio) * (
first_order_tran_amp / np.abs(first_order_tran_amp)) * (np.exp(
2j * pi * (Lt - w / 2) * n_eff_first / wavelength))
if mode == 0:
r00 = r_fund
r01 = r_first
t00 = t_fund
t01 = t_first
su0 = sqrt(np.abs(Su * S_correction))
sd0 = sqrt(np.abs(Sd * S_correction))
r00s.append(r00[0])
r01s.append(r01[0])
t00s.append(t00[0])
t01s.append(t01[0])
su0s.append(su0)
sd0s.append(sd0)
if only_fund:
r10s.append(0)
r11s.append(0)
t10s.append(0)
t11s.append(1)
su1s.append(0)
sd1s.append(0)
else:
r10 = r_fund
r11 = r_first
t10 = t_fund
t11 = t_first
su1 = sqrt(np.abs(Su * S_correction))
sd1 = sqrt(np.abs(Sd * S_correction))
r10s.append(r10[0])
r11s.append(r11[0])
t10s.append(t10[0])
t11s.append(t11[0])
su1s.append(su1)
sd1s.append(sd1)
norm_Su = S * Su / (Su + Sd)
NET = round((R + T + S) * 100, 0)
if NET > 100.0:
NET = 100.0
NET_LOSS = round((Su + Sd) / S * 100, 0)
if NET_LOSS > 100.0:
NET_LOSS = 100.0
'''
np.append(ws, [w * 1000])
np.append(Rs, [R * 100])
np.append(Ts, [T * 100])
np.append(Ss, [S * 100])
np.append(NET_LIST, [NET])
np.append(Sus, [Su * 100])
np.append(Sds, [Sd * 100])
np.append(NET_LOSS_LIST, [NET_LOSS])
np.append(norm_Sus, [norm_Su * 100])
'''
if mode == 0:
ws.append(w * 1000)
Rs.append(R * 100)
Ts.append(T * 100)
Ss.append(S * 100)
NET_LIST.append(NET)
Sus.append(Su * 100)
Sds.append(Sd * 100)
NET_LOSS_LIST.append(NET_LOSS)
norm_Sus.append(norm_Su * 100)
if mode == 0:
f1.write("--------------------------------------------------- \n")
f1.write("Notch Width: %s nanometers \n" % (w * 1000))
f1.write("Reflection Percentage: %s\n" % (R * 100))
f1.write("Transmission Percentage: %s\n" % (T * 100))
f1.write("Total Loss Percentage: %s\n" % (S * 100))
f1.write("Percentage of Light Accounted For: %s\n" % (NET))
f1.write("Upper Loss Percentage: %s\n" % (Su * 100))
f1.write("Lower Loss Percentage: %s\n" % (Sd * 100))
f1.write("Percentage of Total Loss Accounted For: %s\n" %
(NET_LOSS))
f1.write("Normalized Upper Loss Percentage: %s\n" %
(norm_Su * 100))
f1.write("\n \n")
f1.write("FUNDAMENTAL MODE \n")
f1.write("n_eff: %s\n" % (n_eff_fund[0]))
f1.write("Re(r00): %s\n" % (np.real(r00))[0])
f1.write("Im(r00): %s\n" % (np.imag(r00))[0])
f1.write("Re(r01): %s\n" % (np.real(r01))[0])
f1.write("Im(r01): %s\n" % (np.imag(r01))[0])
f1.write("Re(t00): %s\n" % (np.real(t00))[0])
f1.write("Im(t00): %s\n" % (np.imag(t00))[0])
f1.write("Re(t01): %s\n" % (np.real(t01))[0])
f1.write("Im(t01): %s\n" % (np.imag(t01))[0])
f1.write("Re(su0): %s\n" % (np.real(su0)))
f1.write("Im(su0): %s\n" % (np.imag(su0)))
f1.write("Re(sd0): %s\n" % (np.real(sd0)))
f1.write("Im(sd0): %s\n" % (np.imag(sd0)))
f1.write("\n")
else:
f1.write("FIRST ORDER MODE \n")
f1.write("n_eff: %s\n" % (n_eff_first[0]))
f1.write("Re(r10): %s\n" % (np.real(r10))[0])
f1.write("Im(r10): %s\n" % (np.imag(r10))[0])
f1.write("Re(r11): %s\n" % (np.real(r11))[0])
f1.write("Im(r11): %s\n" % (np.imag(r11))[0])
f1.write("Re(t10): %s\n" % (np.real(t10))[0])
f1.write("Im(t10): %s\n" % (np.imag(t10))[0])
f1.write("Re(t11): %s\n" % (np.real(t11))[0])
f1.write("Im(t11): %s\n" % (np.imag(t11))[0])
f1.write("Re(su1): %s\n" % (np.real(su1)))
f1.write("Im(su1): %s\n" % (np.imag(su1)))
f1.write("Re(sd1): %s\n" % (np.real(sd1)))
f1.write("Im(sd1): %s\n" % (np.imag(sd1)))
f1.write("--------------------------------------------------- \n")
sim.reset_meep()
