def test_print_rank_one(self):
out = StringIO()
args_tar = self.mock_args.mock()
args_tar.top = 2
args_tar.tar_start = 20
args_tar.tar_end = 15
mrr.print_rank_one(self.example.srnas, out, "RNAplex", self.example.gffs, self.example.srna_gffs, args_tar)
datas = convert_dict(out.getvalue().split("\n"))
refs = convert_dict(self.example.out_print.split("\n"))
self.assertDictEqual(datas, refs)
def test_print_rank_one(self):
out = StringIO()
args_tar = self.mock_args.mock()
args_tar.top = 2
args_tar.tar_start = 20
args_tar.tar_end = 15
mrr.print_rank_one(self.example.srnas, out, "RNAplex", self.example.gffs, self.example.srna_gffs, args_tar, 50)
datas = convert_dict(out.getvalue().split("\n"))
news = {}
for key, value in datas.items():
if len(key) != 0:
news[key] = value
refs = convert_dict(self.example.out_print.split("\n"))
self.assertDictEqual(news, refs)
def test_print_rank_one(self):
out = StringIO()
args_tar = self.mock_args.mock()
args_tar.top = 2
args_tar.tar_start = 20
args_tar.tar_end = 15
mrr.print_rank_one(self.example.srnas, out, "RNAplex",
self.example.gffs, self.example.srna_gffs,
args_tar, 50)
datas = convert_dict(out.getvalue().split("\n"))
news = {}
for key, value in datas.items():
if len(key) != 0:
news[key] = value
refs = convert_dict(self.example.out_print.split("\n"))
self.assertDictEqual(news, refs)