Ejemplo n.º 1
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    def Storm_Tide_Water_Level(self, so):
        out_fname2 = ''.join([so.output_fname, '_stormtide', '.nc'])

        step = 4
        nc.custom_copy(so.sea_fname,
                       out_fname2,
                       so.begin,
                       so.end,
                       mode='storm_surge',
                       step=step)

        self.Common_Attributes(so, out_fname2, step)

        nc.set_global_attribute(
            out_fname2, 'summary', 'This file contains two time series: 1)'
            'air pressure 2) sea surface elevation.  The latter was derived'
            ' from a time series of high frequency sea pressure measurements '
            ' adjusted using the former and then lowpass filtered to remove '
            ' waves of period 1 second or less.')

        nc.append_depth(out_fname2, so.surge_water_level[::step])

        sea_uuid = nc.get_global_attribute(so.sea_fname, 'uuid')
        air_uuid = nc.get_global_attribute(so.air_fname, 'uuid')
        nc.set_var_attribute(out_fname2, 'air_pressure', 'air_uuid', air_uuid)
        nc.set_var_attribute(out_fname2, 'water_surface_height_above_reference_datum', \
                             'air_uuid', air_uuid)
        nc.set_var_attribute(out_fname2, 'water_surface_height_above_reference_datum', \
                             'sea_uuid', sea_uuid)
Ejemplo n.º 2
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  def Common_Attributes(self,so,file_name,step):
      
      
      #nc.set_var_attribute(water_fname, 'sea_pressure', 'sea_uuid', sea_uuid)
      nc.set_global_attribute(file_name, 'uuid', str(uuid.uuid4()))
  
      #append air pressure
      instr_dict = nc.get_instrument_data(so.air_fname, 'air_pressure')
      nc.append_air_pressure(file_name, so.interpolated_air_pressure[::step], so.air_fname)
      nc.set_instrument_data(file_name, 'air_pressure', instr_dict)
  
      #update the lat and lon comments
      lat_comment = nc.get_variable_attr(file_name, 'latitude', 'comment')
      nc.set_var_attribute(file_name, 'latitude', 'comment',  \
                           ''.join([lat_comment, ' Latitude of sea pressure sensor used to derive ' \
                                    'sea surface elevation.']))
      lon_comment = nc.get_variable_attr(file_name, 'longitude', 'comment')
      nc.set_var_attribute(file_name, 'longitude', 'comment',  \
                           ''.join([lon_comment, ' Longitude of sea pressure sensor used to derive ' \
                                    'sea surface elevation.']))
  
      #set sea_pressure instrument data to global variables in water_level netCDF
      sea_instr_data = nc.get_instrument_data(so.sea_fname,'sea_pressure')
      for x in sea_instr_data:
          attrname = ''.join(['sea_pressure_',x])
          nc.set_global_attribute(file_name,attrname,sea_instr_data[x])
      lat = nc.get_variable_data(file_name, 'latitude')
      lon = nc.get_variable_data(file_name, 'longitude')
 
      first_stamp = nc.get_global_attribute(file_name, 'time_coverage_start')
      last_stamp = nc.get_global_attribute(file_name, 'time_coverage_end')
      
      nc.set_global_attribute(file_name,'title','Calculation of water level at %.4f latitude,'
                              ' %.4f degrees longitude from the date range of %s to %s.'
                              % (lat,lon,first_stamp,last_stamp))
Ejemplo n.º 3
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 def get_meta_data(self):
     if self.datum is None:
         self.datum = nc.get_geospatial_vertical_reference(self.sea_fname)
         self.latitude = nc.get_variable_data(self.sea_fname,'latitude')
         self.longitude = nc.get_variable_data(self.sea_fname,'longitude')
         self.stn_station_number = nc.get_global_attribute(self.sea_fname, 'stn_station_number')
         self.stn_instrument_id = nc.get_global_attribute(self.sea_fname, 'stn_instrument_id')
Ejemplo n.º 4
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 def get_meta_data(self):
     if self.datum is None:
         self.datum = nc.get_geospatial_vertical_reference(self.sea_fname)
         self.latitude = nc.get_variable_data(self.sea_fname, 'latitude')
         self.longitude = nc.get_variable_data(self.sea_fname, 'longitude')
         self.stn_station_number = nc.get_global_attribute(
             self.sea_fname, 'stn_station_number')
         self.stn_instrument_id = nc.get_global_attribute(
             self.sea_fname, 'stn_instrument_id')
Ejemplo n.º 5
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 def Wave_Statistics(self,so):
     out_fname2 = ''.join([so.output_fname,'_stormtide_unfiltered','.nc'])
     
     step = 1
     nc.custom_copy(so.sea_fname, out_fname2, so.begin, so.end, mode = 'storm_surge', step=step)
     self.Common_Attributes(so, out_fname2, step)
     
     sea_uuid = nc.get_global_attribute(so.sea_fname, 'uuid')
     air_uuid = nc.get_global_attribute(so.air_fname, 'uuid')
     
     nc.wave_copy(so.sea_fname, out_fname2, so.begin, so.end, step = step, )
Ejemplo n.º 6
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 def get_air_meta_data(self):
     if self.air_latitude is None:
         
         if self.from_water_level_file == False:
             self.air_latitude = nc.get_variable_data(self.air_fname,'latitude')
             self.air_longitude = nc.get_variable_data(self.air_fname,'longitude')
             self.air_stn_station_number = nc.get_global_attribute(self.air_fname, 'stn_station_number')
             self.air_stn_instrument_id = nc.get_global_attribute(self.air_fname, 'stn_instrument_id')
         else:
             self.air_latitude = nc.get_variable_data(self.air_fname,'latitude')
             self.air_longitude = nc.get_variable_data(self.air_fname,'longitude')
             self.air_stn_station_number = nc.get_global_attribute(self.air_fname, 'stn_station_number')
             self.air_stn_instrument_id = nc.get_variable_attr(self.air_fname, 'air_pressure', 'instrument_serial_number')
Ejemplo n.º 7
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    def Storm_Tide_and_Unfiltered_Water_Level(self, so):

        out_fname2 = ''.join([so.output_fname, '_stormtide_unfiltered', '.nc'])

        step = 1
        nc.custom_copy(so.sea_fname,
                       out_fname2,
                       so.begin,
                       so.end,
                       mode='storm_surge',
                       step=step)
        self.Common_Attributes(so, out_fname2, step)

        nc.set_global_attribute(
            out_fname2, 'summary', 'This file contains three time series: 1)'
            ' air pressure 2) sea surface elevation 3) unfiltered sea surface elevation.'
            ' The second was derived'
            ' from a time series of high frequency sea pressure measurements'
            ' adjusted using the former and then lowpass filtered to remove'
            ' waves of period 1 second or less. The third is also sea surface elevation'
            ' with no such filter.')

        nc.append_depth(out_fname2, so.surge_water_level[::step])
        sea_uuid = nc.get_global_attribute(so.sea_fname, 'uuid')
        air_uuid = nc.get_global_attribute(so.air_fname, 'uuid')
        nc.set_var_attribute(out_fname2, 'air_pressure', 'air_uuid', air_uuid)

        nc.append_variable(out_fname2, 'unfiltered_water_surface_height_above_reference_datum', so.raw_water_level[::step], \
                            'Unfiltered Sea Surface Elevation', 'unfiltered_water_surface_height_above_reference_datum')
        nc.append_variable(out_fname2, 'wave_wl', so.wave_water_level[::step], \
                            'wave_wl', 'wave_wl')
        nc.set_var_attribute(out_fname2, 'water_surface_height_above_reference_datum', \
                             'air_uuid', air_uuid)
        nc.set_var_attribute(out_fname2, 'water_surface_height_above_reference_datum', \
                             'sea_uuid', sea_uuid)
        nc.set_var_attribute(out_fname2, 'unfiltered_water_surface_height_above_reference_datum', \
                             'air_uuid', air_uuid)
        nc.set_var_attribute(out_fname2, 'unfiltered_water_surface_height_above_reference_datum', \
                             'sea_uuid', sea_uuid)
        nc.set_var_attribute(out_fname2, 'unfiltered_water_surface_height_above_reference_datum', \
                             'units', 'meters')
        nc.set_var_attribute(out_fname2, 'unfiltered_water_surface_height_above_reference_datum', \
                             'nodc_name', 'WATER LEVEL')
        nc.set_var_attribute(out_fname2, 'unfiltered_water_surface_height_above_reference_datum', \
                             'ioos_category', 'sea_level')
Ejemplo n.º 8
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    def extract_salinity(self, fname):
        salinity = nc.get_global_attribute(fname, 'salinity')

        if salinity == "Salt Water (> 30 ppt)":
            return "salt"

        if salinity == "Brackish Water (.5 - 30 ppt)":
            return "brackish"

        return "fresh"
Ejemplo n.º 9
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 def extract_salinity(self, fname):
     salinity = nc.get_global_attribute(fname, 'salinity')
     
     if salinity == "Salt Water (> 30 ppt)":
         return "salt"
     
     if salinity == "Brackish Water (.5 - 30 ppt)":
         return "brackish"
     
     return "fresh"
Ejemplo n.º 10
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 def get_wind_meta_data(self):
     if self.wind_latitude is None:
         
         try:
             self.wind_latitude = nc.get_variable_data(self.wind_fname,'latitude')
             self.wind_longitude = nc.get_variable_data(self.wind_fname,'longitude')
             self.wind_stn_station_number = nc.get_global_attribute(self.wind_fname, 'stn_station_number')
         except:
             self.wind_latitude = 0
             self.wind_longitude = 0
             self.wind_stn_station_number = 'na'
Ejemplo n.º 11
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    def get_air_meta_data(self):
        if self.air_latitude is None:

            if self.from_water_level_file == False:
                self.air_latitude = nc.get_variable_data(
                    self.air_fname, 'latitude')
                self.air_longitude = nc.get_variable_data(
                    self.air_fname, 'longitude')
                self.air_stn_station_number = nc.get_global_attribute(
                    self.air_fname, 'stn_station_number')
                self.air_stn_instrument_id = nc.get_global_attribute(
                    self.air_fname, 'stn_instrument_id')
            else:
                self.air_latitude = nc.get_variable_data(
                    self.air_fname, 'latitude')
                self.air_longitude = nc.get_variable_data(
                    self.air_fname, 'longitude')
                self.air_stn_station_number = nc.get_global_attribute(
                    self.air_fname, 'stn_station_number')
                self.air_stn_instrument_id = nc.get_variable_attr(
                    self.air_fname, 'air_pressure', 'instrument_serial_number')
Ejemplo n.º 12
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 def Storm_Tide_and_Unfiltered_Water_Level(self,so):
     
     out_fname2 = ''.join([so.output_fname,'_stormtide_unfiltered','.nc'])
     
     step = 1
     nc.custom_copy(so.sea_fname, out_fname2, so.begin, so.end, mode = 'storm_surge', step=step)
     self.Common_Attributes(so, out_fname2, step)
         
     nc.set_global_attribute(out_fname2,'summary','This file contains three time series: 1)' 
                             ' air pressure 2) sea surface elevation 3) unfiltered sea surface elevation.'
                             ' The second was derived'
                             ' from a time series of high frequency sea pressure measurements'
                             ' adjusted using the former and then lowpass filtered to remove'
                             ' waves of period 1 second or less. The third is also sea surface elevation'
                             ' with no such filter.')
     
     nc.append_depth(out_fname2, so.surge_water_level[::step])
     sea_uuid = nc.get_global_attribute(so.sea_fname, 'uuid')
     air_uuid = nc.get_global_attribute(so.air_fname, 'uuid')
     nc.set_var_attribute(out_fname2, 'air_pressure', 'air_uuid', air_uuid)
     
     nc.append_variable(out_fname2, 'unfiltered_water_surface_height_above_reference_datum', so.raw_water_level[::step], \
                         'Unfiltered Sea Surface Elevation', 'unfiltered_water_surface_height_above_reference_datum')
     nc.append_variable(out_fname2, 'wave_wl', so.wave_water_level[::step], \
                         'wave_wl', 'wave_wl')
     nc.set_var_attribute(out_fname2, 'water_surface_height_above_reference_datum', \
                          'air_uuid', air_uuid)
     nc.set_var_attribute(out_fname2, 'water_surface_height_above_reference_datum', \
                          'sea_uuid', sea_uuid)
     nc.set_var_attribute(out_fname2, 'unfiltered_water_surface_height_above_reference_datum', \
                          'air_uuid', air_uuid)
     nc.set_var_attribute(out_fname2, 'unfiltered_water_surface_height_above_reference_datum', \
                          'sea_uuid', sea_uuid)
     nc.set_var_attribute(out_fname2, 'unfiltered_water_surface_height_above_reference_datum', \
                          'units', 'meters')
     nc.set_var_attribute(out_fname2, 'unfiltered_water_surface_height_above_reference_datum', \
                          'nodc_name', 'WATER LEVEL')
     nc.set_var_attribute(out_fname2, 'unfiltered_water_surface_height_above_reference_datum', \
                          'ioos_category', 'sea_level')
Ejemplo n.º 13
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    def Wave_Statistics(self, so):
        out_fname2 = ''.join([so.output_fname, '_stormtide_unfiltered', '.nc'])

        step = 1
        nc.custom_copy(so.sea_fname,
                       out_fname2,
                       so.begin,
                       so.end,
                       mode='storm_surge',
                       step=step)
        self.Common_Attributes(so, out_fname2, step)

        sea_uuid = nc.get_global_attribute(so.sea_fname, 'uuid')
        air_uuid = nc.get_global_attribute(so.air_fname, 'uuid')

        nc.wave_copy(
            so.sea_fname,
            out_fname2,
            so.begin,
            so.end,
            step=step,
        )
Ejemplo n.º 14
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    def get_wind_meta_data(self):
        if self.wind_latitude is None:

            try:
                self.wind_latitude = nc.get_variable_data(
                    self.wind_fname, 'latitude')
                self.wind_longitude = nc.get_variable_data(
                    self.wind_fname, 'longitude')
                self.wind_stn_station_number = nc.get_global_attribute(
                    self.wind_fname, 'stn_station_number')
            except:
                self.wind_latitude = 0
                self.wind_longitude = 0
                self.wind_stn_station_number = 'na'
Ejemplo n.º 15
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 def Storm_Tide_Water_Level(self, so): 
     out_fname2 = ''.join([so.output_fname,'_stormtide','.nc'])
     
     step = 4
     nc.custom_copy(so.sea_fname, out_fname2, so.begin, so.end, mode = 'storm_surge', step=step)
     
     self.Common_Attributes(so,out_fname2,step)
     
         
     nc.set_global_attribute(out_fname2,'summary','This file contains two time series: 1)' 
                             'air pressure 2) sea surface elevation.  The latter was derived'
                             ' from a time series of high frequency sea pressure measurements '
                             ' adjusted using the former and then lowpass filtered to remove '
                             ' waves of period 1 second or less.')
     
     nc.append_depth(out_fname2, so.surge_water_level[::step])
     
     sea_uuid = nc.get_global_attribute(so.sea_fname, 'uuid')
     air_uuid = nc.get_global_attribute(so.air_fname, 'uuid')
     nc.set_var_attribute(out_fname2, 'air_pressure', 'air_uuid', air_uuid)
     nc.set_var_attribute(out_fname2, 'water_surface_height_above_reference_datum', \
                          'air_uuid', air_uuid)
     nc.set_var_attribute(out_fname2, 'water_surface_height_above_reference_datum', \
                          'sea_uuid', sea_uuid)
Ejemplo n.º 16
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    def Common_Attributes(self, so, file_name, step):

        #nc.set_var_attribute(water_fname, 'sea_pressure', 'sea_uuid', sea_uuid)
        nc.set_global_attribute(file_name, 'uuid', str(uuid.uuid4()))

        #append air pressure
        instr_dict = nc.get_instrument_data(so.air_fname, 'air_pressure')
        nc.append_air_pressure(file_name, so.interpolated_air_pressure[::step],
                               so.air_fname)
        nc.set_instrument_data(file_name, 'air_pressure', instr_dict)

        #update the lat and lon comments
        lat_comment = nc.get_variable_attr(file_name, 'latitude', 'comment')
        nc.set_var_attribute(file_name, 'latitude', 'comment',  \
                             ''.join([lat_comment, ' Latitude of sea pressure sensor used to derive ' \
                                      'sea surface elevation.']))
        lon_comment = nc.get_variable_attr(file_name, 'longitude', 'comment')
        nc.set_var_attribute(file_name, 'longitude', 'comment',  \
                             ''.join([lon_comment, ' Longitude of sea pressure sensor used to derive ' \
                                      'sea surface elevation.']))

        #set sea_pressure instrument data to global variables in water_level netCDF
        sea_instr_data = nc.get_instrument_data(so.sea_fname, 'sea_pressure')
        for x in sea_instr_data:
            attrname = ''.join(['sea_pressure_', x])
            nc.set_global_attribute(file_name, attrname, sea_instr_data[x])
        lat = nc.get_variable_data(file_name, 'latitude')
        lon = nc.get_variable_data(file_name, 'longitude')

        first_stamp = nc.get_global_attribute(file_name, 'time_coverage_start')
        last_stamp = nc.get_global_attribute(file_name, 'time_coverage_end')

        nc.set_global_attribute(
            file_name, 'title', 'Calculation of water level at %.4f latitude,'
            ' %.4f degrees longitude from the date range of %s to %s.' %
            (lat, lon, first_stamp, last_stamp))
Ejemplo n.º 17
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    def multi_water_level(self, path, title, mode='Raw'):

        self.create_header()

        ax = self.figure.add_subplot(self.grid_spec[1, 0:])
        pos1 = ax.get_position()  # get the original position
        pos2 = [pos1.x0, pos1.y0, pos1.width, pos1.height + .06]
        ax.set_position(pos2)  # set a new position

        #create the second graph title
        first_title = "%s %s Water Level Time Series Comparison" % (title,
                                                                    mode)

        titleText = ax.text(0.5, 1.065,first_title,  \
            va='center', ha='center', transform=ax.transAxes)

        ax.set_ylabel('Water Level in Feet')
        ax.set_xlabel('Timezone GMT')

        #plot major grid lines
        ax.grid(b=True, which='major', color='grey', linestyle="-")

        #x axis formatter for dates (function format_date() below)
        ax.xaxis.set_major_formatter(ticker.FuncFormatter(self.format_date))

        legend_list, label_list = [], []
        air, sea, sea_file, air_file = False, False, '', ''
        file_types = ['.nc']
        for root, sub_folders, files in os.walk(path):
            for file_in_root in files:

                index = file_in_root.rfind('.')
                if file_in_root[index:] in file_types:
                    file = ''.join([root, '\\', file_in_root])
                    try:
                        nc.get_pressure(file)
                        sea = True
                        sea_file = file
                    except:
                        try:
                            nc.get_air_pressure(file)
                            air = True
                            air_file = file
                        except:
                            pass

                    if sea and air:
                        sea, air = False, False

                        so = StormOptions()
                        so.air_fname = air_file
                        so.sea_fname = sea_file

                        so.timezone = 'GMT'
                        so.daylight_savings = False

                        so.get_meta_data()
                        so.get_air_meta_data()
                        so.get_raw_water_level()
                        so.get_surge_water_level()
                        so.test_water_elevation_below_sensor_orifice_elvation()
                        so.get_wave_water_level()

                        first_date = unit_conversion.convert_ms_to_date(
                            so.sea_time[0], pytz.UTC)
                        last_date = unit_conversion.convert_ms_to_date(
                            so.sea_time[-1], pytz.UTC)

                        first_date = mdates.date2num(first_date)
                        last_date = mdates.date2num(last_date)

                        self.time_nums = np.linspace(first_date, last_date,
                                                     len(so.sea_time))

                        lat = nc.get_variable_data(sea_file, 'latitude')
                        lon = nc.get_variable_data(sea_file, 'longitude')

                        stn_id = nc.get_global_attribute(
                            sea_file, 'stn_instrument_id')
                        stn_station = nc.get_global_attribute(
                            sea_file, 'stn_station_number')

                        if mode == 'Surge':
                            p1, = ax.plot(self.time_nums,
                                          so.surge_water_level,
                                          alpha=.5)
                            legend_list.append(p1)
                            label_list.append('STN Site ID: %s, STN Instrument ID: %s, Lat: %s, Lon: %s' \
                                              %(stn_id, stn_station, lat, lon))
                        if mode == 'Wave':
                            p1, = ax.plot(self.time_nums,
                                          so.wave_water_level,
                                          alpha=.5)
                            legend_list.append(p1)
                            label_list.append('STN Site ID: %s, STN Instrument ID: %s, Lat: %s, Lon: %s' \
                                              %(stn_id, stn_station, lat, lon))
                        if mode == 'Raw':
                            p1, = ax.plot(self.time_nums,
                                          so.raw_water_level,
                                          alpha=.5)
                            legend_list.append(p1)
                            label_list.append('STN Site ID: %s, STN Instrument ID: %s, Lat: %s, Lon: %s' \
                                              %(stn_id, stn_station, lat, lon))


        legend = ax.legend(legend_list,label_list
        , \
                  bbox_to_anchor=(.95, 1.355), loc=1, borderaxespad=0.0, prop={'size':10.3},frameon=False,numpoints=1, \
                  title="EXPLANATION")
        legend.get_title().set_position((-340, 0))

        plt.savefig(''.join([title, mode]))
Ejemplo n.º 18
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    def multi_air_pressure(self,path, title):
        self.create_header()
        
        ax = self.figure.add_subplot(self.grid_spec[1,0:])
        pos1 = ax.get_position() # get the original position 
        pos2 = [pos1.x0, pos1.y0,  pos1.width, pos1.height + .06] 
        ax.set_position(pos2) # set a new position
        
        #create the second graph title
        first_title = "%s Air Pressure Time Series Comparison" % title
       
        titleText = ax.text(0.5, 1.065,first_title,  \
            va='center', ha='center', transform=ax.transAxes)
      
        ax.set_ylabel('Air Pressure in Inches of Mercury')
        ax.set_xlabel('Timezone GMT')
        
        #plot major grid lines
        ax.grid(b=True, which='major', color='grey', linestyle="-")

        #x axis formatter for dates (function format_date() below)
        ax.xaxis.set_major_formatter(ticker.FuncFormatter(self.format_date))
        
        legend_list, label_list = [], []
        
        file_types = ['.nc']
        for root, sub_folders, files in os.walk(path):
            for file_in_root in files:
                
                index = file_in_root.rfind('.')
                if file_in_root[index:] in file_types:    
                    file = ''.join([root,'\\',file_in_root])
                    try:         
                        air_pressure = nc.get_air_pressure(file) * unit_conversion.DBAR_TO_INCHES_OF_MERCURY
                        time = nc.get_time(file)
                        
                        first_date = unit_conversion.convert_ms_to_date(time[0], pytz.UTC)
                        last_date = unit_conversion.convert_ms_to_date(time[-1], pytz.UTC)

                        first_date = mdates.date2num(first_date)
                        last_date = mdates.date2num(last_date)
           
                        self.time_nums = np.linspace(first_date, last_date, len(time))
                        
                        lat = nc.get_variable_data(file, 'latitude')
                        lon = nc.get_variable_data(file, 'longitude')
                        stn_id = nc.get_global_attribute(file, 'stn_instrument_id')
                        stn_station = nc.get_global_attribute(file, 'stn_station_number')

                        p1, = ax.plot(self.time_nums, air_pressure, alpha=.5)
                        legend_list.append(p1)
                        label_list.append('STN Site ID: %s, STN Instrument ID: %s, Lat: %s, Lon: %s' \
                                          %(stn_id, stn_station, lat, lon))
                        
                    except:
                        pass
                    
        legend = ax.legend(legend_list,label_list
        , \
                  bbox_to_anchor=(.95, 1.355), loc=1, borderaxespad=0.0, prop={'size':10.3},frameon=False,numpoints=1, \
                  title="EXPLANATION")
        legend.get_title().set_position((-340, 0))
                    
        plt.savefig('b')
Ejemplo n.º 19
0
    def multi_air_pressure(self, path, title):
        self.create_header()

        ax = self.figure.add_subplot(self.grid_spec[1, 0:])
        pos1 = ax.get_position()  # get the original position
        pos2 = [pos1.x0, pos1.y0, pos1.width, pos1.height + .06]
        ax.set_position(pos2)  # set a new position

        #create the second graph title
        first_title = "%s Air Pressure Time Series Comparison" % title

        titleText = ax.text(0.5, 1.065,first_title,  \
            va='center', ha='center', transform=ax.transAxes)

        ax.set_ylabel('Air Pressure in Inches of Mercury')
        ax.set_xlabel('Timezone GMT')

        #plot major grid lines
        ax.grid(b=True, which='major', color='grey', linestyle="-")

        #x axis formatter for dates (function format_date() below)
        ax.xaxis.set_major_formatter(ticker.FuncFormatter(self.format_date))

        legend_list, label_list = [], []

        file_types = ['.nc']
        for root, sub_folders, files in os.walk(path):
            for file_in_root in files:

                index = file_in_root.rfind('.')
                if file_in_root[index:] in file_types:
                    file = ''.join([root, '\\', file_in_root])
                    try:
                        air_pressure = nc.get_air_pressure(
                            file) * unit_conversion.DBAR_TO_INCHES_OF_MERCURY
                        time = nc.get_time(file)

                        first_date = unit_conversion.convert_ms_to_date(
                            time[0], pytz.UTC)
                        last_date = unit_conversion.convert_ms_to_date(
                            time[-1], pytz.UTC)

                        first_date = mdates.date2num(first_date)
                        last_date = mdates.date2num(last_date)

                        self.time_nums = np.linspace(first_date, last_date,
                                                     len(time))

                        lat = nc.get_variable_data(file, 'latitude')
                        lon = nc.get_variable_data(file, 'longitude')
                        stn_id = nc.get_global_attribute(
                            file, 'stn_instrument_id')
                        stn_station = nc.get_global_attribute(
                            file, 'stn_station_number')

                        p1, = ax.plot(self.time_nums, air_pressure, alpha=.5)
                        legend_list.append(p1)
                        label_list.append('STN Site ID: %s, STN Instrument ID: %s, Lat: %s, Lon: %s' \
                                          %(stn_id, stn_station, lat, lon))

                    except:
                        pass

        legend = ax.legend(legend_list,label_list
        , \
                  bbox_to_anchor=(.95, 1.355), loc=1, borderaxespad=0.0, prop={'size':10.3},frameon=False,numpoints=1, \
                  title="EXPLANATION")
        legend.get_title().set_position((-340, 0))

        plt.savefig('b')
Ejemplo n.º 20
0
    def multi_water_level(self,path,title, mode='Raw'):
        
        self.create_header()
        
        ax = self.figure.add_subplot(self.grid_spec[1,0:])
        pos1 = ax.get_position() # get the original position 
        pos2 = [pos1.x0, pos1.y0,  pos1.width, pos1.height + .06] 
        ax.set_position(pos2) # set a new position
        
        #create the second graph title
        first_title = "%s %s Water Level Time Series Comparison" % (title, mode)
       
        titleText = ax.text(0.5, 1.065,first_title,  \
            va='center', ha='center', transform=ax.transAxes)
      
        ax.set_ylabel('Water Level in Feet')
        ax.set_xlabel('Timezone GMT')
        
        #plot major grid lines
        ax.grid(b=True, which='major', color='grey', linestyle="-")

        #x axis formatter for dates (function format_date() below)
        ax.xaxis.set_major_formatter(ticker.FuncFormatter(self.format_date))
        
        legend_list, label_list = [], []
        air, sea, sea_file, air_file = False, False, '', ''
        file_types = ['.nc']
        for root, sub_folders, files in os.walk(path):
            for file_in_root in files:
                
                index = file_in_root.rfind('.')
                if file_in_root[index:] in file_types:    
                    file = ''.join([root,'\\',file_in_root])
                    try:         
                        nc.get_pressure(file)
                        sea = True
                        sea_file = file
                    except:
                        try:
                            nc.get_air_pressure(file)
                            air = True
                            air_file = file
                        except:
                            pass
                        
                    
                    if sea and air:  
                        sea, air = False, False 
                        
                        so = StormOptions()
                        so.air_fname = air_file
                        so.sea_fname = sea_file
                   
                        so.timezone = 'GMT'
                        so.daylight_savings = False
                        
                        so.get_meta_data()
                        so.get_air_meta_data()
                        so.get_raw_water_level()
                        so.get_surge_water_level()
                        so.test_water_elevation_below_sensor_orifice_elvation()
                        so.get_wave_water_level()
                        
                        
                        first_date = unit_conversion.convert_ms_to_date(so.sea_time[0], pytz.UTC)
                        last_date = unit_conversion.convert_ms_to_date(so.sea_time[-1], pytz.UTC)
    
                        first_date = mdates.date2num(first_date)
                        last_date = mdates.date2num(last_date)
           
                        self.time_nums = np.linspace(first_date, last_date, len(so.sea_time))
                        
                        lat = nc.get_variable_data(sea_file, 'latitude')
                        lon = nc.get_variable_data(sea_file, 'longitude')
    
                        stn_id = nc.get_global_attribute(sea_file, 'stn_instrument_id')
                        stn_station = nc.get_global_attribute(sea_file, 'stn_station_number')
                        
                        if mode=='Surge':
                            p1, = ax.plot(self.time_nums, so.surge_water_level, alpha=.5)
                            legend_list.append(p1)
                            label_list.append('STN Site ID: %s, STN Instrument ID: %s, Lat: %s, Lon: %s' \
                                              %(stn_id, stn_station, lat, lon))
                        if mode=='Wave':
                            p1, = ax.plot(self.time_nums, so.wave_water_level, alpha=.5)
                            legend_list.append(p1)
                            label_list.append('STN Site ID: %s, STN Instrument ID: %s, Lat: %s, Lon: %s' \
                                              %(stn_id, stn_station, lat, lon))
                        if mode=='Raw':
                            p1, = ax.plot(self.time_nums, so.raw_water_level, alpha=.5)
                            legend_list.append(p1)
                            label_list.append('STN Site ID: %s, STN Instrument ID: %s, Lat: %s, Lon: %s' \
                                              %(stn_id, stn_station, lat, lon))
                        
                   
        legend = ax.legend(legend_list,label_list
        , \
                  bbox_to_anchor=(.95, 1.355), loc=1, borderaxespad=0.0, prop={'size':10.3},frameon=False,numpoints=1, \
                  title="EXPLANATION")
        legend.get_title().set_position((-340, 0))
                    
       
        plt.savefig(''.join([title,mode]))