def populate_metadata(client, conn, script_params):
object_id = int(script_params["IDs"])
file_id = int(script_params["File_ID"])
original_file = get_original_file(conn, script_params["Data_Type"],
object_id, file_id)
provider = DownloadingOriginalFileProvider(conn)
file_handle = provider.get_original_file_data(original_file)
if script_params["Data_Type"] == "Plate":
omero_object = PlateI(int(object_id), False)
else:
omero_object = ScreenI(int(object_id), False)
ctx = ParsingContext(client, omero_object, "")
ctx.parse_from_handle(file_handle)
ctx.write_to_omero()
def populate_metadata(client, conn, script_params):
object_id = long(script_params["IDs"])
file_id = long(script_params["File_ID"])
original_file = get_original_file(
conn, script_params["Data_Type"], object_id, file_id)
provider = DownloadingOriginalFileProvider(conn)
file_handle = provider.get_original_file_data(original_file)
if script_params["Data_Type"] == "Plate":
omero_object = PlateI(long(object_id), False)
else:
omero_object = ScreenI(long(object_id), False)
ctx = ParsingContext(client, omero_object, "")
ctx.parse_from_handle(file_handle)
ctx.write_to_omero()
def populate_metadata(client, conn, script_params):
object_ids = script_params["IDs"]
object_id = object_ids[0]
file_ann_id = None
if "File_Annotation" in script_params:
file_ann_id = long(script_params["File_Annotation"])
data_type = script_params["Data_Type"]
original_file = get_original_file(conn, data_type, object_id, file_ann_id)
provider = DownloadingOriginalFileProvider(conn)
file_handle = provider.get_original_file_data(original_file)
if data_type == "Plate":
omero_object = PlateI(long(object_id), False)
else:
omero_object = ScreenI(long(object_id), False)
ctx = ParsingContext(client, omero_object, "")
ctx.parse_from_handle(file_handle)
ctx.write_to_omero()
return "Table data populated for %s: %s" % (data_type, object_id)
