def create_final(year):
temporary_store = TemporaryStore.create(file_name = "erfs")
log.info(u"création de final")
foy_ind = temporary_store['foy_ind_{}'.format(year)]
tot3 = temporary_store['tot3_{}'.format(year)]
foy_ind.set_index(['idfoy', 'quifoy'], inplace = True)
tot3.set_index(['idfoy', 'quifoy'], inplace = True)
final = concat([tot3, foy_ind], join_axes=[tot3.index], axis=1)
final.reset_index(inplace = True)
foy_ind.reset_index(inplace = True)
tot3.reset_index(inplace = True)
# tot3 = tot3.drop_duplicates(cols=['idfam', 'quifam'])
final = final[final.idmen.notnull()]
control(final, verbose=True)
del tot3, foy_ind
gc.collect()
# final <- merge(final, sif, by = c('noindiv'), all.x = TRUE)
log.info(" loading fip")
sif = temporary_store['sif_{}'.format(year)]
log.info("{}".format(sif.columns))
log.info(" update final using fip")
final = final.merge(sif, on=["noindiv"], how="left")
# TODO: IL FAUT UNE METHODE POUR GERER LES DOUBLES DECLARATIONS
control(final, debug=True)
final['caseP'] = final.caseP.fillna(False)
final['caseF'] = final.caseF.fillna(False)
print_id(final)
temporary_store['final_{}'.format(year)] = final
log.info(u"final sauvegardé")
del sif, final
def create_final(temporary_store=None, year=None):
assert temporary_store is not None
assert year is not None
log.info(u"création de final")
foy_ind = temporary_store['foy_ind_{}'.format(year)]
tot3 = temporary_store['tot3_{}'.format(year)]
log.info(u"Stats on tot3")
print_id(tot3)
log.info(u"Stats on foy_ind")
print_id(foy_ind)
foy_ind.set_index(['idfoy', 'quifoy'], inplace=True, verify_integrity=True)
tot3.set_index(['idfoy', 'quifoy'], inplace=True, verify_integrity=True)
# tot3 = concat([tot3, foy_ind], join_axes=[tot3.index], axis=1, verify_integrity = True)
# TODO improve this
foy_ind.drop([u'alr', u'rsti', u'sali', u'choi'], axis=1, inplace=True)
tot3 = tot3.join(foy_ind)
tot3.reset_index(inplace=True)
foy_ind.reset_index(inplace=True)
# tot3 = tot3.drop_duplicates(subset=['idfam', 'quifam'])
control(tot3, verbose=True)
final = tot3.loc[tot3.idmen.notnull(), :].copy()
control(final, verbose=True)
del tot3, foy_ind
gc.collect()
log.info(" loading fip")
sif = temporary_store['sif_{}'.format(year)]
log.info("Columns from sif dataframe: {}".format(sif.columns))
log.info(" update final using fip")
final.set_index('noindiv', inplace=True, verify_integrity=True)
# TODO: IL FAUT UNE METHODE POUR GERER LES DOUBLES DECLARATIONS
# On ne garde que les sif.noindiv qui correspondent à des idfoy == "vous"
# Et on enlève les duplicates
idfoys = final.loc[final.quifoy == 0, "idfoy"]
sif = sif[sif.noindiv.isin(idfoys)
& ~(sif.change.isin(['M', 'S', 'Z']))].copy()
sif.drop_duplicates(subset=['noindiv'], inplace=True)
sif.set_index('noindiv', inplace=True, verify_integrity=True)
final = final.join(sif)
final.reset_index(inplace=True)
control(final, debug=True)
final['caseP'] = final.caseP.fillna(False)
final['caseF'] = final.caseF.fillna(False)
print_id(final)
temporary_store['final_{}'.format(year)] = final
log.info(u"final sauvegardé")
del sif, final
def create_final(temporary_store = None, year = None):
assert temporary_store is not None
assert year is not None
log.info(u"création de final")
foy_ind = temporary_store['foy_ind_{}'.format(year)]
tot3 = temporary_store['tot3_{}'.format(year)]
log.info(u"Stats on tot3")
print_id(tot3)
log.info(u"Stats on foy_ind")
print_id(foy_ind)
foy_ind.set_index(['idfoy', 'quifoy'], inplace = True, verify_integrity = True)
tot3.set_index(['idfoy', 'quifoy'], inplace = True, verify_integrity = True)
# tot3 = concat([tot3, foy_ind], join_axes=[tot3.index], axis=1, verify_integrity = True)
# TODO improve this
foy_ind.drop([u'alr', u'rsti', u'sali', u'choi'], axis = 1, inplace = True)
tot3 = tot3.join(foy_ind)
tot3.reset_index(inplace = True)
foy_ind.reset_index(inplace = True)
# tot3 = tot3.drop_duplicates(subset=['idfam', 'quifam'])
control(tot3, verbose=True)
final = tot3.loc[tot3.idmen.notnull(), :].copy()
control(final, verbose=True)
del tot3, foy_ind
gc.collect()
log.info(" loading fip")
sif = temporary_store['sif_{}'.format(year)]
log.info("Columns from sif dataframe: {}".format(sif.columns))
log.info(" update final using fip")
final.set_index('noindiv', inplace = True, verify_integrity = True)
# TODO: IL FAUT UNE METHODE POUR GERER LES DOUBLES DECLARATIONS
# On ne garde que les sif.noindiv qui correspondent à des idfoy == "vous"
# Et on enlève les duplicates
idfoys = final.loc[final.quifoy == 0, "idfoy"]
sif = sif[sif.noindiv.isin(idfoys) & ~(sif.change.isin(['M', 'S', 'Z']))].copy()
sif.drop_duplicates(subset = ['noindiv'], inplace = True)
sif.set_index('noindiv', inplace = True, verify_integrity = True)
final = final.join(sif)
final.reset_index(inplace = True)
control(final, debug=True)
final['caseP'] = final.caseP.fillna(False)
final['caseF'] = final.caseF.fillna(False)
print_id(final)
temporary_store['final_{}'.format(year)] = final
log.info(u"final sauvegardé")
del sif, final
def create_totals_second_pass(temporary_store=None, year=None):
assert temporary_store is not None
assert year is not None
log.info(u" 5.1 : Elimination idfoy restant")
# Voiture balai
# On a plein d'idfoy vides, on fait 1 ménage = 1 foyer fiscal
indivi = temporary_store['indivi_step_06_{}'.format(year)]
idfoyList = indivi.loc[indivi.quifoy == "vous", 'idfoy'].unique()
indivi_without_idfoy = ~indivi.idfoy.isin(idfoyList)
indivi.loc[indivi_without_idfoy, 'quifoy'] = "pac"
indivi.loc[indivi_without_idfoy & (indivi.quimen == 0) &
(indivi.age >= 18), 'quifoy'] = "vous"
indivi.loc[indivi_without_idfoy & (indivi.quimen == 0) &
(indivi.age >= 18), 'idfoy'] = (
indivi.loc[indivi_without_idfoy, "idmen"].astype('int') *
100 + 51)
indivi.loc[indivi_without_idfoy & (indivi.quimen == 1) &
(indivi.age >= 18), 'quifoy'] = "conj"
del idfoyList
print_id(indivi)
# Sélectionne les variables à garder pour les steps suivants
variables = [
"actrec",
"age",
"age_en_mois",
"chpub",
"encadr",
"idfoy",
"idmen",
"nbsala",
"noi",
"noindiv",
"prosa",
"quelfic",
"quifoy",
"quimen",
"statut",
"titc",
"txtppb",
"wprm",
"rc1rev",
"maahe",
"sali",
"rsti",
"choi",
"alr",
"wprm",
]
assert set(variables).issubset(set(indivi.columns)), \
"Manquent les colonnes suivantes : {}".format(set(variables).difference(set(indivi.columns)))
dropped_columns = [
variable for variable in indivi.columns if variable not in variables
]
indivi.drop(dropped_columns, axis=1, inplace=True)
# see http://stackoverflow.com/questions/11285613/selecting-columns
indivi.reset_index(inplace=True)
gc.collect()
# TODO les actrec des fip ne sont pas codées (on le fera à la fin quand on aura rassemblé
# les infos provenant des déclarations)
log.info(u"Etape 6 : Création des variables descriptives")
log.info(u" 6.1 : Variable activité")
log.info(u"Variables présentes; \n {}".format(indivi.columns))
indivi['activite'] = np.nan
indivi.loc[indivi.actrec <= 3, 'activite'] = 0
indivi.loc[indivi.actrec == 4, 'activite'] = 1
indivi.loc[indivi.actrec == 5, 'activite'] = 2
indivi.loc[indivi.actrec == 7, 'activite'] = 3
indivi.loc[indivi.actrec == 8, 'activite'] = 4
indivi.loc[indivi.age <= 13,
'activite'] = 2 # ce sont en fait les actrec=9
log.info("Valeurs prises par la variable activité \n {}".format(
indivi['activite'].value_counts(dropna=False)))
# TODO: MBJ problem avec les actrec
# TODO: FIX AND REMOVE
indivi.loc[indivi.actrec.isnull(), 'activite'] = 5
indivi.loc[indivi.titc.isnull(), 'titc'] = 0
assert indivi.titc.notnull().all(), \
u"Problème avec les titc" # On a 420 NaN pour les varaibels statut, titc etc
log.info(u" 6.2 : Variable statut")
indivi.loc[indivi.statut.isnull(), 'statut'] = 0
indivi.statut = indivi.statut.astype('int')
indivi.loc[indivi.statut == 11, 'statut'] = 1
indivi.loc[indivi.statut == 12, 'statut'] = 2
indivi.loc[indivi.statut == 13, 'statut'] = 3
indivi.loc[indivi.statut == 21, 'statut'] = 4
indivi.loc[indivi.statut == 22, 'statut'] = 5
indivi.loc[indivi.statut == 33, 'statut'] = 6
indivi.loc[indivi.statut == 34, 'statut'] = 7
indivi.loc[indivi.statut == 35, 'statut'] = 8
indivi.loc[indivi.statut == 43, 'statut'] = 9
indivi.loc[indivi.statut == 44, 'statut'] = 10
indivi.loc[indivi.statut == 45, 'statut'] = 11
assert indivi.statut.isin(range(12)).all(), u"statut value over range"
log.info("Valeurs prises par la variable statut \n {}".format(
indivi['statut'].value_counts(dropna=False)))
log.info(u" 6.3 : variable txtppb")
indivi.loc[indivi.txtppb.isnull(), 'txtppb'] = 0
assert indivi.txtppb.notnull().all()
indivi.loc[indivi.nbsala.isnull(), 'nbsala'] = 0
indivi.nbsala = indivi.nbsala.astype('int')
indivi.loc[indivi.nbsala == 99, 'nbsala'] = 10
assert indivi.nbsala.isin(range(11)).all()
log.info("Valeurs prises par la variable txtppb \n {}".format(
indivi['txtppb'].value_counts(dropna=False)))
log.info(u" 6.4 : variable chpub et CSP")
indivi.loc[indivi.chpub.isnull(), 'chpub'] = 0
indivi.chpub = indivi.chpub.astype('int')
assert indivi.chpub.isin(range(11)).all()
indivi['cadre'] = 0
indivi.loc[indivi.prosa.isnull(), 'prosa'] = 0
assert indivi.prosa.notnull().all()
log.info("Valeurs prises par la variable encadr \n {}".format(
indivi['encadr'].value_counts(dropna=False)))
# encadr : 1=oui, 2=non
indivi.loc[indivi.encadr.isnull(), 'encadr'] = 2
indivi.loc[indivi.encadr == 0, 'encadr'] = 2
assert indivi.encadr.notnull().all()
assert indivi.encadr.isin([1, 2]).all()
indivi.loc[indivi.prosa.isin([7, 8]), 'cadre'] = 1
indivi.loc[(indivi.prosa == 9) & (indivi.encadr == 1), 'cadre'] = 1
assert indivi.cadre.isin(range(2)).all()
log.info(
u"Etape 7: on vérifie qu'il ne manque pas d'info sur les liens avec la personne de référence"
)
log.info(u"nb de doublons idfoy/quifoy {}".format(
len(indivi[indivi.duplicated(subset=['idfoy', 'quifoy'])])))
log.info(u"On crée les n° de personnes à charge dans le foyer fiscal")
assert indivi.idfoy.notnull().all()
print_id(indivi)
indivi['quifoy_bis'] = 2
indivi.loc[indivi.quifoy == 'vous', 'quifoy_bis'] = 0
indivi.loc[indivi.quifoy == 'conj', 'quifoy_bis'] = 1
indivi.loc[indivi.quifoy == 'pac', 'quifoy_bis'] = 2
del indivi['quifoy']
indivi['quifoy'] = indivi.quifoy_bis.copy()
del indivi['quifoy_bis']
print_id(indivi)
pac = indivi.loc[indivi['quifoy'] == 2,
['quifoy', 'idfoy', 'noindiv']].copy()
print_id(pac)
j = 2
while pac.duplicated(['quifoy', 'idfoy']).any():
pac.loc[pac.duplicated(['quifoy', 'idfoy']), 'quifoy'] = j
j += 1
print_id(pac)
indivi = indivi.merge(pac, on=['noindiv', 'idfoy'], how="left")
indivi['quifoy'] = indivi['quifoy_x']
indivi['quifoy'] = where(indivi['quifoy_x'] == 2, indivi['quifoy_y'],
indivi['quifoy_x'])
del indivi['quifoy_x'], indivi['quifoy_y']
print_id(indivi)
del pac
assert len(indivi[indivi.duplicated(subset = ['idfoy', 'quifoy'])]) == 0, \
u"Il y a {} doublons idfoy/quifoy".format(
len(indivi[indivi.duplicated(subset = ['idfoy', 'quifoy'])])
)
print_id(indivi)
log.info(u"Etape 8 : création des fichiers totaux")
famille = temporary_store['famc_{}'.format(year)]
log.info(u" 8.1 : création de tot2 & tot3")
tot2 = indivi.merge(famille, on='noindiv', how='inner')
# TODO: MBJ increase in number of menage/foyer when merging with family ...
del famille
control(tot2, debug=True, verbose=True)
assert tot2.quifam.notnull().all()
temporary_store['tot2_{}'.format(year)] = tot2
del indivi
log.info(u" tot2 saved")
tot2 = tot2[tot2.idmen.notnull()].copy()
print_id(tot2)
tot3 = tot2
# TODO: check where they come from
log.info("Avant élimination des doublons noindiv: {}".format(len(tot3)))
tot3 = tot3.drop_duplicates(subset='noindiv')
log.info("Après élimination des doublons noindiv: {}".format(len(tot3)))
# Block to remove any unwanted duplicated pair
control(tot3, debug=True, verbose=True)
tot3 = tot3.drop_duplicates(subset=['idfoy', 'quifoy'])
log.info("Après élimination des doublons idfoy, quifoy: {}".format(
len(tot3)))
tot3 = tot3.drop_duplicates(subset=['idfam', 'quifam'])
log.info("Après élimination des doublons idfam, 'quifam: {}".format(
len(tot3)))
tot3 = tot3.drop_duplicates(subset=['idmen', 'quimen'])
log.info("Après élimination des doublons idmen, quimen: {}".format(
len(tot3)))
tot3 = tot3.drop_duplicates(subset=['noindiv'])
control(tot3)
log.info(u" 8.2 : On ajoute les variables individualisables")
allvars = temporary_store['ind_vars_to_remove_{}'.format(year)]
vars2 = set(tot3.columns).difference(set(allvars))
tot3 = tot3[list(vars2)]
log.info("{}".format(len(tot3)))
assert not (tot3.duplicated(
subset=['noindiv']).any()), "doublon dans tot3['noindiv']"
lg_dup = len(tot3[tot3.duplicated(['idfoy', 'quifoy'])])
assert lg_dup == 0, "{} pairs of idfoy/quifoy in tot3 are duplicated".format(
lg_dup)
temporary_store['tot3_{}'.format(year)] = tot3
control(tot3)
del tot2, allvars, tot3, vars2
gc.collect()
log.info(u"tot3 sauvegardé")
def invalide(temporary_store=None, year=None):
assert temporary_store is not None
assert year is not None
log.info(u"Entering 07_invalides: construction de la variable invalide")
# # # Invalides
# # #invalide = caseP (vous), caseF (conj) ou case G, caseI, ou caseR (pac)
# # loadTmp("final.Rdata")
# # invalides <- final[,c("noindiv","idmen","caseP","caseF","idfoy","quifoy")]
# # invalides <- within(invalides,{
# # caseP <- ifelse(is.na(caseP),0,caseP)
# # caseF <- ifelse(is.na(caseF),0,caseF)
# # invalide <- FALSE})
# # # Les "vous" invalides
# # table(invalides[,c("caseF","quifoy")],useNA="ifany")
# # invalides[(invalides$caseP==1) & (invalides$quifoy=="vous"),"invalide"] <- TRUE
# #
log.info(u"Etape 1 : création de la df invalides")
log.info(u" 1.1 : déclarants invalides")
final = temporary_store['final_{}'.format(year)]
if "invalide" in final:
# on drop les colones inv et alt au cas ou on aurait déjà lancé le step07
final.drop(["invalide", "alt"], axis=1, inplace=True)
invalides_vars = [
"caseF",
"caseP",
"idfoy",
"idmen",
"noindiv",
"quifoy",
]
aah_eec_variables = ["rc1rev", "maahe"]
aah_eec = False
if set(aah_eec_variables) < set(final.columns):
aah_eec = True
invalides_vars += aah_eec_variables
assert set(invalides_vars) < set(final.columns), \
"Variables {} are missing".format(set(invalides_vars).difference(set(final.columns)))
invalides = final.xs(invalides_vars, axis=1).copy()
invalides['invalide'] = False
invalides['alt'] = False
for var in ["caseP", "caseF"]:
assert invalides[var].notnull().all(), 'NaN values in {}'.format(var)
# Les déclarants invalides
invalides.loc[(invalides['caseP'] == 1) & (invalides['quifoy'] == 0),
'invalide'] = True
log.info(u"Il y a {} invalides déclarants".format(
invalides["invalide"].sum()))
# Les personnes qui touchent l'aah dans l'enquête emploi
if aah_eec:
log.info(u"Inspecting rc1rev")
log.info(invalides['rc1rev'].value_counts())
invalides.loc[invalides.maahe > 0, 'invalide'] = True
invalides.loc[invalides.rc1rev == 4,
'invalide'] = True # TODO: vérifier le format.
# TODO: invalides.rc1rev.astype("str") voir mai mahdi pour pendre en compte 14 24 etc
log.info(u"Il y a {} invalides qui touchent des alloc".format(
invalides["invalide"].sum()))
print_id(invalides)
# # # Les conjoints invalides
# #
# # #men_inv_conj <- invalides[c("idmen","caseF","quifoy")]
# # #men_inv_conj <- rename(men_inv_conj, c("caseF"="invalide"))
# # #table(men_inv_conj[men_inv_conj$inv==1 ,c("invalide","quifoy")],useNA="ifany")
# # # Il y a des caseF suir des conjoints cela vint des doubles d?clarations TODO: shoumd clean this
# # #toto <- invalides[invalides$caseF==1 & invalides$quifoy=="conj","idmen"]
# # #load(indm)
# # #titi <- indivim[(indivim$ident %in% toto) & (indivim$persfip=="vous" |indivim$persfip=="conj") ,c("ident","noindiv","declar1","declar2","persfip","quelfic")]
# # #titi <- titi[order(titi$ident),]
# # foy_inv_conj <- invalides[,c("idfoy","caseF","quifoy")]
# # foy_inv_conj <- rename(foy_inv_conj, c("caseF"="invalide"))
# # table(foy_inv_conj[ ,c("invalide","quifoy")],useNA="ifany")
# # # On ne garde donc que les caseF des "vous"
# # foy_inv_conj <- foy_inv_conj[foy_inv_conj$quifoy=="vous",c("idfoy","invalide")]
# # table(foy_inv_conj[ ,c("invalide")],useNA="ifany")
# # invalides_conj <- invalides[invalides$quifoy=="conj",c("idfoy","noindiv")]
# # invalides_conj <- merge(invalides_conj, foy_inv_conj, by="idfoy", all.x=TRUE)
# # table(invalides_conj$inv) # TODO en 2006 On en a 316 au lieu de 328 il doit y avoir de idfoy avec caseF qui n'ont pas de vous because double déclaration'
# # invalides[invalides$quifoy=="conj",c("idfoy","noindiv","invalide")] <- invalides_conj
# # table(invalides[,c("invalide","quifoy")],useNA="ifany")
# # rm(invalides_conj,foy_inv_conj)
# On récupère les idfoy des foyers avec une caseF cochée
log.info(' 1.2 : Les conjoints invalides')
idfoy_inv_conj = final.idfoy[final.caseF].copy()
inv_conj_condition = (invalides.idfoy.isin(idfoy_inv_conj) &
(invalides.quifoy == 1))
invalides.loc[inv_conj_condition, "invalide"] = True
log.info(u"Il y a {} invalides conjoints".format(
len(invalides[inv_conj_condition])))
log.info(u" Il y a {} invalides déclarants et invalides conjoints".format(
invalides["invalide"].sum()))
# Enfants invalides et garde alternée
# #
# # loadTmp("pacIndiv.Rdata")
# # foy_inv_pac <- invalides[!(invalides$quifoy %in% c("vous","conj")),c("invalide","noindiv")]
# # foy_inv_pac <- merge(foy_inv_pac, pacIndiv[,c("noindiv","typ","naia")], by="noindiv",all.x =TRUE)
# # names(foy_inv_pac)
# # table(foy_inv_pac[,c("typ","naia")],useNA="ifany")
# # table(foy_inv_pac[,c("typ")],useNA="ifany")
# # foy_inv_pac <- within(foy_inv_pac,{
# # invalide <- (typ=="G") | (typ=="R") | (typ=="I") | (typ=="F" & (as.numeric(year)-naia>18))
# # alt <- (typ=="H") | (typ=="I")
# # naia <- NULL
# # typ <- NULL})
# #
# # table(foy_inv_pac[ ,c("invalide")],useNA="ifany")
# # table(foy_inv_pac[ ,c("alt")],useNA="ifany")
# # invalides$alt <- 0
# # foy_inv_pac[is.na(foy_inv_pac$alt),"alt"] <- 0
# # invalides[!(invalides$quifoy %in% c("vous","conj")),c("noindiv","invalide","alt")] <- foy_inv_pac
log.info(
u" 1.3 : enfants invalides et en garde alternée (variables inv et alt)"
)
pacIndiv = temporary_store['pacIndiv_{}'.format(year)]
# print pacIndiv.type_pac.value_counts()
log.info(pacIndiv.type_pac.value_counts())
foy_inv_pac = invalides[['noindiv', 'invalide'
]][~(invalides.quifoy.isin([0, 1]))].copy()
# pac = pacIndiv.ix[:, ["noindiv", "type_pac", "naia"]]
log.info("{}".format(len(foy_inv_pac)))
log.info("{}".format(pacIndiv.columns))
foy_inv_pac = foy_inv_pac.merge(
pacIndiv[['noindiv', 'type_pac', 'naia']].copy(),
on='noindiv',
how='left',
)
foy_inv_pac['invalide'] = (foy_inv_pac['type_pac'].isin(['G', 'R', 'I']) |
((foy_inv_pac.type_pac == "F") &
((year - foy_inv_pac.naia) > 18)))
foy_inv_pac['alt'] = ((foy_inv_pac.type_pac == "H") |
(foy_inv_pac.type_pac == "I"))
del foy_inv_pac['naia']
del foy_inv_pac['type_pac']
foy_inv_pac['alt'] = foy_inv_pac['alt'].fillna(False)
log.info("{}".format(foy_inv_pac['invalide'].describe()))
invalides.loc[:, 'alt'] = False
invalides.loc[~(invalides.quifoy.isin([0, 1])),
["alt", "invalide"]] = foy_inv_pac[["alt", "invalide"
]].copy().values
invalides = invalides[["noindiv", "invalide", 'alt']].copy()
invalides['alt'].fillna(False, inplace=True)
log.info(invalides.invalide.value_counts())
# invalides = invalides.drop_duplicates(['noindiv', 'invalide', 'alt'], take_last = True)
del foy_inv_pac, pacIndiv
# Initialisation des NA sur alt et inv
# invalides[is.na(invalides$inv), "invalide"] <- 0
# table(invalides[,c("alt","invalide")],useNA="ifany")
#
# final <- merge(final, invalides[,c("noindiv","invalide","alt")], by="noindiv",all.x=TRUE)
# table(final[, c("invalide","alt")],useNA="ifany")
log.info('Etape 2 : Initialisation des NA sur alt et inv')
assert invalides.invalide.notnull().all() & invalides.alt.notnull().all()
final.set_index('noindiv', inplace=True, verify_integrity=True)
invalides.set_index('noindiv', inplace=True, verify_integrity=True)
final = final.join(invalides)
final.reset_index(inplace=True)
del invalides
log.info("{}".format(final.invalide.value_counts()))
control(final, debug=True)
temporary_store['final_{}'.format(year)] = final
log.info(u'final complétée et sauvegardée')
def create_totals(year = None):
assert year is not None
temporary_store = TemporaryStore.create(file_name = "erfs")
replace = create_replace(year)
# On part de la table individu de l'ERFS
# on renomme les variables
log.info(u"Creating Totals")
log.info(u"Etape 1 : Chargement des données")
erfs_survey_collection = SurveyCollection.load(collection = 'erfs', config_files_directory = config_files_directory)
data = erfs_survey_collection.get_survey('erfs_{}'.format(year))
indivim = temporary_store['indivim_{}'.format(year)]
assert not indivim.duplicated(['noindiv']).any(), "Présence de doublons"
# Deals individuals with imputed income : some individuals are in 'erf individu table' but
# not in the 'foyer' table. We need to create a foyer for them.
selection = Series()
for var in ["zsali", "zchoi", "zrsti", "zalri", "zrtoi", "zragi", "zrici", "zrnci"]:
varo = var[:-1] + "o"
test = indivim[var] != indivim[varo]
if len(selection) == 0:
selection = test
else:
selection = (test) | (selection)
indivi_i = indivim[selection].copy()
indivi_i.rename(
columns = {
"ident": "idmen",
"persfip": "quifoy",
"zsali": "sali2", # Inclu les salaires non imposables des agents d'assurance
"zchoi": "choi2",
"zrsti": "rsti2",
"zalri": "alr2"
},
inplace = True,
)
indivi_i.quifoy = where(indivi_i.quifoy.isnull(), "vous", indivi_i.quifoy)
indivi_i.quelfic = "FIP_IMP"
# We merge them with the other individuals
indivim.rename(
columns = dict(
ident = "idmen",
persfip = "quifoy",
zsali = "sali2", # Inclu les salaires non imposables des agents d'assurance
zchoi = "choi2",
zrsti = "rsti2",
zalri = "alr2",
),
inplace = True,
)
if not (set(list(indivim.noindiv)) > set(list(indivi_i.noindiv))):
raise Exception("Individual ")
indivim.set_index("noindiv", inplace = True)
indivi_i.set_index("noindiv", inplace = True)
indivi = indivim
del indivim
indivi.update(indivi_i)
indivi.reset_index(inplace = True)
log.info("Etape 2 : isolation des FIP")
fip_imp = indivi.quelfic == "FIP_IMP"
indivi["idfoy"] = (
indivi.idmen.astype("int64") * 100 +
(indivi.declar1.str[0:2]).convert_objects(convert_numeric=True)
)
indivi.loc[fip_imp, "idfoy"] = np.nan
# Certains FIP (ou du moins avec revenus imputés) ont un numéro de déclaration d'impôt ( pourquoi ?)
fip_has_declar = (fip_imp) & (indivi.declar1.notnull())
indivi["idfoy"] = where(
fip_has_declar,
indivi.idmen * 100 + indivi.declar1.str[0:2].convert_objects(convert_numeric = True),
indivi.idfoy)
del fip_has_declar
fip_no_declar = (fip_imp) & (indivi.declar1.isnull())
del fip_imp
indivi["idfoy"] = where(fip_no_declar, indivi["idmen"] * 100 + 50, indivi["idfoy"])
indivi_fnd = indivi[["idfoy", "noindiv"]][fip_no_declar].copy()
while any(indivi_fnd.duplicated(cols=["idfoy"])):
indivi_fnd["idfoy"] = where(
indivi_fnd.duplicated(cols=["idfoy"]),
indivi_fnd["idfoy"] + 1,
indivi_fnd["idfoy"]
)
# assert indivi_fnd["idfoy"].duplicated().value_counts()[False] == len(indivi_fnd["idfoy"].values), "Duplicates remaining"
assert len(indivi[indivi.duplicated(['noindiv'])]) == 0, "Doublons"
indivi.idfoy[fip_no_declar] = indivi_fnd.idfoy.copy()
del indivi_fnd, fip_no_declar
log.info(u"Etape 3 : Récupération des EE_NRT")
nrt = indivi.quelfic == "EE_NRT"
indivi.idfoy = where(nrt, indivi.idmen * 100 + indivi.noi, indivi.idfoy)
indivi.quifoy[nrt] = "vous"
del nrt
pref_or_cref = indivi.lpr.isin([1, 2])
adults = (indivi.quelfic.isin(["EE", "EE_CAF"])) & (pref_or_cref)
indivi.idfoy = where(adults, indivi.idmen * 100 + indivi.noi, indivi.idfoy)
indivi.loc[adults, "quifoy"] = "vous"
del adults
# TODO: hack to avoid assert error
log.info("{}".format(indivi.loc[indivi['lpr'].isin([1, 2]), "idfoy"].notnull().value_counts()))
assert indivi.idfoy[indivi.lpr.dropna().isin([1, 2])].all()
log.info(u"Etape 4 : Rattachement des enfants aux déclarations")
assert not(indivi.noindiv.duplicated().any()), "Some noindiv appear twice"
lpr3_or_lpr4 = indivi['lpr'].isin([3, 4])
enf_ee = (lpr3_or_lpr4) & (indivi.quelfic.isin(["EE", "EE_CAF"]))
assert indivi.noindiv[enf_ee].notnull().all(), " Some noindiv are not set, which will ruin next stage"
assert not(indivi.noindiv[enf_ee].duplicated().any()), "Some noindiv appear twice"
pere = DataFrame({
"noindiv_enf": indivi.noindiv.loc[enf_ee],
"noindiv": 100 * indivi.idmen.loc[enf_ee] + indivi.noiper.loc[enf_ee]
})
mere = DataFrame({
"noindiv_enf": indivi.noindiv.loc[enf_ee],
"noindiv": 100 * indivi.idmen.loc[enf_ee] + indivi.noimer.loc[enf_ee]
})
foyer = data.get_values(variables = ["noindiv", "zimpof"], table = replace["foyer"])
pere = pere.merge(foyer, how = "inner", on = "noindiv")
mere = mere.merge(foyer, how = "inner", on = "noindiv")
df = pere.merge(mere, how = "outer", on = "noindiv_enf", suffixes=('_p', '_m'))
log.info(u" 4.1 : gestion des personnes dans 2 foyers")
for col in ["noindiv_p", "noindiv_m", "noindiv_enf"]:
df[col] = df[col].fillna(0, inplace = True) # beacause groupby drop groups with NA in index
df = df.groupby(by = ["noindiv_p", "noindiv_m", "noindiv_enf"]).sum()
df.reset_index(inplace = True)
df["which"] = ""
df.which = where((df.zimpof_m.notnull()) & (df.zimpof_p.isnull()), "mere", "")
df.which = where((df.zimpof_p.notnull()) & (df.zimpof_m.isnull()), "pere", "")
both = (df.zimpof_p.notnull()) & (df.zimpof_m.notnull())
df.which = where(both & (df.zimpof_p > df.zimpof_m), "pere", "mere")
df.which = where(both & (df.zimpof_m >= df.zimpof_p), "mere", "pere")
assert df.which.notnull().all(), "Some enf_ee individuals are not matched with any pere or mere"
del lpr3_or_lpr4, pere, mere
df.rename(columns = {"noindiv_enf": "noindiv"}, inplace = True)
df['idfoy'] = where(df.which == "pere", df.noindiv_p, df.noindiv_m)
df['idfoy'] = where(df.which == "mere", df.noindiv_m, df.noindiv_p)
assert df["idfoy"].notnull().all()
dropped = [col for col in df.columns if col not in ["idfoy", "noindiv"]]
df.drop(dropped, axis = 1, inplace = True)
assert not(df.duplicated().any())
df.set_index("noindiv", inplace = True, verify_integrity = True)
indivi.set_index("noindiv", inplace = True, verify_integrity = True)
ind_notnull = indivi["idfoy"].notnull().sum()
ind_isnull = indivi["idfoy"].isnull().sum()
indivi = indivi.combine_first(df)
assert ind_notnull + ind_isnull == (
indivi["idfoy"].notnull().sum() +
indivi["idfoy"].isnull().sum()
)
indivi.reset_index(inplace = True)
assert not(indivi.duplicated().any())
# MBJ: issue delt with when moving from R code to python
# TODO il faut rajouterles enfants_fip et créer un ménage pour les majeurs
# On suit guide méthodo erf 2003 page 135
# On supprime les conjoints FIP et les FIP de 25 ans et plus;
# On conserve les enfants FIP de 19 à 24 ans;
# On supprime les FIP de 18 ans et moins, exceptés les FIP nés en 2002 dans un
# ménage en 6ème interrogation car ce sont des enfants nés aprés la date d'enquète
# EEC que l'on ne retrouvera pas dans les EEC suivantes.
#
log.info(u" 4.2 : On enlève les individus pour lesquels il manque le déclarant")
fip = temporary_store['fipDat_{}'.format(year)]
fip["declar"] = np.nan
fip["agepf"] = np.nan
fip.drop(["actrec", "year", "noidec"], axis = 1, inplace = True)
fip.naia = fip.naia.astype("int32")
fip.rename(
columns = dict(
ident = "idmen",
persfip = "quifoy",
zsali = "sali2", # Inclu les salaires non imposables des agents d'assurance
zchoi = "choi2",
zrsti = "rsti2",
zalri = "alr2"),
inplace = True)
is_fip_19_25 = ((year - fip.naia - 1) >= 19) & ((year - fip.naia - 1) < 25)
# TODO: BUT for the time being we keep them in thier vous menage so the following lines are commented
# The idmen are of the form 60XXXX we use idmen 61XXXX, 62XXXX for the idmen of the kids over 18 and less than 25
# fip[is_fip_19_25 ,"idmen"] <- (99-fip[is_fip_19_25,"noi"]+1)*100000 + fip[is_fip_19_25,"idmen"]
# fip[is_fip_19_25 ,"lpr"] <- 1
#
# indivi <- rbind.fill(indivi,fip[is_fip_19_25,])
indivi = concat([indivi, fip.loc[is_fip_19_25]])
del is_fip_19_25
indivi['age'] = year - indivi.naia - 1
indivi['age_en_mois'] = 12 * indivi.age + 12 - indivi.naim
indivi["quimen"] = 0
indivi.quimen[indivi.lpr == 1] = 0
indivi.quimen[indivi.lpr == 2] = 1
indivi.quimen[indivi.lpr == 3] = 2
indivi.quimen[indivi.lpr == 4] = 3
indivi['not_pr_cpr'] = None # Create a new row
indivi.not_pr_cpr[indivi.lpr <= 2] = False
indivi.not_pr_cpr[indivi.lpr > 2] = True
assert indivi.not_pr_cpr.isin([True, False]).all()
log.info(u" 4.3 : Creating non pr=0 and cpr=1 idmen's")
indivi.reset_index(inplace = True)
test1 = indivi[['quimen', 'idmen']][indivi.not_pr_cpr].copy()
test1['quimen'] = 2
j = 2
while any(test1.duplicated(['quimen', 'idmen'])):
test1.loc[test1.duplicated(['quimen', 'idmen']), 'quimen'] = j + 1
j += 1
print_id(indivi)
indivi.update(test1)
print_id(indivi)
# indivi.set_index(['quimen']) #TODO: check relevance
# TODO problème avec certains idfoy qui n'ont pas de vous
log.info(u"Etape 5 : Gestion des idfoy qui n'ont pas de vous")
all_ind = indivi.drop_duplicates('idfoy')
with_ = indivi.loc[indivi.quifoy == 'vous', 'idfoy']
without = all_ind[~(all_ind.idfoy.isin(with_.values))]
log.info(u"On cherche si le déclarant donné par la deuxième déclaration est bien un vous")
# TODO: the following should be delt with at the import of the tables
indivi.replace(
to_replace = {
'declar2': {'NA': np.nan, '': np.nan}
},
inplace = True
)
has_declar2 = (indivi.idfoy.isin(without.idfoy.values)) & (indivi.declar2.notnull())
decl2_idfoy = (
indivi.loc[has_declar2, "idmen"].astype('int') * 100 +
indivi.loc[has_declar2, "declar2"].str[0:2].astype('int') )
indivi.loc[has_declar2, 'idfoy'] = where(decl2_idfoy.isin(with_.values), decl2_idfoy, None)
del all_ind, with_, without, has_declar2
log.info(u" 5.1 : Elimination idfoy restant")
idfoyList = indivi.loc[indivi.quifoy == "vous", 'idfoy'].drop_duplicates()
indivi = indivi[indivi.idfoy.isin(idfoyList.values)]
del idfoyList
print_id(indivi)
# Sélectionne les variables à garder pour les steps suivants
myvars = [
"actrec",
"age",
"age_en_mois",
"chpub",
"encadr",
"idfoy",
"idmen",
"nbsala",
"noi",
"noindiv",
"prosa",
"quelfic",
"quifoy",
"quimen",
"statut",
"titc",
"txtppb",
"wprm",
"rc1rev",
"maahe",
]
assert len(set(myvars).difference(set(indivi.columns))) == 0, \
"Manquent les colonnes suivantes : {}".format(set(myvars).difference(set(indivi.columns)))
indivi = indivi[myvars].copy()
# TODO les actrec des fip ne sont pas codées (on le fera à la fin quand on aura rassemblé
# les infos provenant des déclarations)
log.info(u"Etape 6 : Création des variables descriptives")
log.info(u" 6.1 : variable activité")
indivi['activite'] = None
indivi['activite'][indivi.actrec <= 3] = 0
indivi['activite'][indivi.actrec == 4] = 1
indivi['activite'][indivi.actrec == 5] = 2
indivi['activite'][indivi.actrec == 7] = 3
indivi['activite'][indivi.actrec == 8] = 4
indivi['activite'][indivi.age <= 13] = 2 # ce sont en fait les actrec=9
log.info("{}".format(indivi['activite'].value_counts(dropna = False)))
# TODO: MBJ problem avec les actrec
# TODO: FIX AND REMOVE
indivi.activite[indivi.actrec.isnull()] = 5
indivi.titc[indivi.titc.isnull()] = 0
assert indivi.titc.notnull().all(), u"Problème avec les titc" # On a 420 NaN pour les varaibels statut, titc etc
log.info(u" 6.2 : variable statut")
indivi.statut[indivi.statut.isnull()] = 0
indivi.statut = indivi.statut.astype('int')
indivi.statut[indivi.statut == 11] = 1
indivi.statut[indivi.statut == 12] = 2
indivi.statut[indivi.statut == 13] = 3
indivi.statut[indivi.statut == 21] = 4
indivi.statut[indivi.statut == 22] = 5
indivi.statut[indivi.statut == 33] = 6
indivi.statut[indivi.statut == 34] = 7
indivi.statut[indivi.statut == 35] = 8
indivi.statut[indivi.statut == 43] = 9
indivi.statut[indivi.statut == 44] = 10
indivi.statut[indivi.statut == 45] = 11
assert indivi.statut.isin(range(12)).all(), u"statut value over range"
log.info(u" 6.3 : variable txtppb")
indivi.txtppb.fillna(0, inplace = True)
assert indivi.txtppb.notnull().all()
indivi.nbsala.fillna(0, inplace = True)
indivi['nbsala'] = indivi.nbsala.astype('int')
indivi.nbsala[indivi.nbsala == 99] = 10
assert indivi.nbsala.isin(range(11)).all()
log.info(u" 6.4 : variable chpub et CSP")
indivi.chpub.fillna(0, inplace = True)
indivi.chpub = indivi.chpub.astype('int')
indivi.chpub[indivi.chpub.isnull()] = 0
assert indivi.chpub.isin(range(11)).all()
indivi['cadre'] = 0
indivi.prosa.fillna(0, inplace = True)
assert indivi['prosa'].notnull().all()
log.info("{}".format(indivi['encadr'].value_counts(dropna = False)))
# encadr : 1=oui, 2=non
indivi.encadr.fillna(2, inplace = True)
indivi.encadr[indivi.encadr == 0] = 2
assert indivi.encadr.notnull().all()
assert indivi.encadr.isin([1, 2]).all()
indivi['cadre'][indivi.prosa.isin([7, 8])] = 1
indivi['cadre'][(indivi.prosa == 9) & (indivi.encadr == 1)] = 1
assert indivi['cadre'].isin(range(2)).all()
log.info(
u"Etape 7: on vérifie qu'il ne manque pas d'info sur les liens avec la personne de référence")
log.info(
u"nb de doublons idfam/quifam {}".format(len(indivi[indivi.duplicated(cols=['idfoy', 'quifoy'])])))
log.info(u"On crée les n° de personnes à charge")
assert indivi['idfoy'].notnull().all()
print_id(indivi)
indivi['quifoy2'] = 2
indivi.quifoy2[indivi.quifoy == 'vous'] = 0
indivi.quifoy2[indivi.quifoy == 'conj'] = 1
indivi.quifoy2[indivi.quifoy == 'pac'] = 2
del indivi['quifoy']
indivi['quifoy'] = indivi.quifoy2
del indivi['quifoy2']
print_id(indivi)
test2 = indivi[['quifoy', 'idfoy', 'noindiv']][indivi['quifoy'] == 2].copy()
print_id(test2)
j = 2
while test2.duplicated(['quifoy', 'idfoy']).any():
test2.loc[test2.duplicated(['quifoy', 'idfoy']), 'quifoy'] = j
j += 1
print_id(test2)
indivi = indivi.merge(test2, on = ['noindiv', 'idfoy'], how = "left")
indivi['quifoy'] = indivi['quifoy_x']
indivi['quifoy'] = where(indivi['quifoy_x'] == 2, indivi['quifoy_y'], indivi['quifoy_x'])
del indivi['quifoy_x'], indivi['quifoy_y']
print_id(indivi)
del test2, fip
log.info(
u"nb de doublons idfam/quifam' {}".format(
len(indivi[indivi.duplicated(subset = ['idfoy', 'quifoy'])])
)
)
print_id(indivi)
log.info(u"Etape 8 : création des fichiers totaux")
famille = temporary_store['famc_{}'.format(year)]
log.info(u" 8.1 : création de tot2 & tot3")
tot2 = indivi.merge(famille, on = 'noindiv', how = 'inner')
# del famille # TODO: MBJ increase in number of menage/foyer when merging with family ...
del famille
control(tot2, debug = True, verbose = True)
assert tot2.quifam.notnull().all()
temporary_store['tot2_{}'.format(year)] = tot2
del indivi
log.info(u" tot2 saved")
tot2.merge(foyer, how = 'left')
tot2 = tot2[tot2.idmen.notnull()].copy()
print_id(tot2)
tot3 = tot2
# TODO: check where they come from
tot3 = tot3.drop_duplicates(subset = 'noindiv')
log.info("{}".format(len(tot3)))
# Block to remove any unwanted duplicated pair
control(tot3, debug = True, verbose = True)
tot3 = tot3.drop_duplicates(subset = ['idfoy', 'quifoy'])
tot3 = tot3.drop_duplicates(subset = ['idfam', 'quifam'])
tot3 = tot3.drop_duplicates(subset = ['idmen', 'quimen'])
tot3 = tot3.drop_duplicates(subset = ['noindiv'])
control(tot3)
log.info(u" 8.2 : On ajoute les variables individualisables")
allvars = temporary_store['ind_vars_to_remove_{}'.format(year)]
vars2 = set(tot3.columns).difference(set(allvars))
tot3 = tot3[list(vars2)]
log.info("{}".format(len(tot3)))
assert not(tot3.duplicated(subset = ['noindiv']).any()), "doublon dans tot3['noindiv']"
lg_dup = len(tot3[tot3.duplicated(['idfoy', 'quifoy'])])
assert lg_dup == 0, "{} pairs of idfoy/quifoy in tot3 are duplicated".format(lg_dup)
temporary_store['tot3_{}'.format(year)] = tot3
control(tot3)
del tot2, allvars, tot3, vars2
log.info(u"tot3 sauvegardé")
gc.collect()
def final(year=None, filename="test", check=True):
assert year is not None
temporary_store = TemporaryStore.create(file_name="erfs")
##***********************************************************************/
log.info(u'08_final: derniers réglages')
##***********************************************************************/
#
# loadTmp("final.Rdata")
# # On définit comme célibataires les individus dont on n'a pas retrouvé la déclaration
# final$statmarit[is.na(final$statmarit)] <- 2
# table(final$statmarit, useNA='ifany')
#
import gc
gc.collect()
final = temporary_store['final_{}'.format(year)]
log.info('check doublons'.format(len(final[final.duplicated(['noindiv'
])])))
final.statmarit = where(final.statmarit.isnull(), 2, final.statmarit)
#
# # activite des fip
# table(final[final$quelfic=="FIP","activite"],useNA="ifany")
# summary(final[final$quelfic=="FIP",c("activite","choi","sali","alr","rsti","age")] )
# # activite # actif occup? 0, ch?meur 1, ?tudiant/?l?ve 2, retrait? 3, autre inactif 4
#
# final_fip <- final[final$quelfic=="FIP",]
# final_fip <- within(final_fip,{
# choi <- ifelse(is.na(choi),0,choi)
# sali <- ifelse(is.na(sali),0,sali)
# alr <- ifelse(is.na(alr),0,alr)
# rsti <- ifelse(is.na(rsti),0,rsti)
# activite <- 2 # TODO comment choisr la valeur par d?faut ?
# activite <- ifelse(choi > 0,1,activite)
# activite <- ifelse(sali > 0,0,activite)
# activite <- ifelse(age >= 21, 2,activite) # ne peuvent être rattachés que les étudiants
# })
# final[final$quelfic=="FIP",]<- final_fip
# table(final_fip[,c("age","activite")])
# rm(final_fip)
#
# print_id(final)
# saveTmp(final, file= "final.Rdata")
#
log.info(' gestion des FIP de final')
final_fip = final[["choi", "sali", "alr", "rsti",
"age"]][final.quelfic == "FIP"].copy()
log.info(
set(["choi", "sali", "alr",
"rsti"]).difference(set(final_fip.columns)))
for var in ["choi", "sali", "alr", "rsti"]:
final_fip[var].fillna(0, inplace=True)
assert final_fip[var].notnull().all(
), "Some NaN are remaining in column {}".format(var)
final_fip["activite"] = 2 # TODO comment choisr la valeur par défaut ?
final_fip.activite = where(final_fip.choi > 0, 1, final_fip.activite)
final_fip.activite = where(final_fip.sali > 0, 0, final_fip.activite)
final_fip.activite = where(
final_fip.age > 21, 2,
final_fip.activite) # ne peuvent être rattachés que les étudiants
final.update(final_fip)
temporary_store['final_{}'.format(year)] = final
log.info("final has been updated with fip")
menage_en_mois = temporary_store['menage_en_mois_{}'.format(year)]
menage_en_mois.rename(columns=dict(ident="idmen", loym="loyer"),
inplace=True)
menage_en_mois["cstotpragr"] = np.floor(menage_en_mois["cstotpr"] / 10)
# 2008 tau99 removed TODO: check ! and check incidence
vars = [
"champm",
"cstotpragr",
"ddipl",
"idmen",
"loyer",
"nbinde",
"pol99",
"reg",
"so",
"tau99",
"tu99",
"typmen15",
"wprm",
"zthabm",
]
if year == 2008:
vars.remove("tau99")
famille_vars = [
"m_afeamam", "m_agedm", "m_clcam", "m_colcam", 'm_mgamm', 'm_mgdomm'
]
# if ("naf16pr" %in% names(menage_en_mois)) {
# naf16pr <- factor(menage_en_mois$naf16pr)
# levels(naf16pr) <- 0:16
# menage_en_mois$naf16pr <- as.character(naf16pr)
# menage_en_mois[is.na(menage_en_mois$naf16pr), "naf16pr" ] <- "-1" # Sans objet
# vars <- c(vars,"naf16pr")
# } else if ("nafg17npr" %in% names(menage_en_mois)) {
# # TODO: pb in 2008 with xx
# if (year == "2008"){
# menage_en_mois[ menage_en_mois$nafg17npr == "xx" & !is.na(menage_en_mois$nafg17npr), "nafg17npr"] <- "00"
# }
# nafg17npr <- factor(menage_en_mois$nafg17npr)
# levels(nafg17npr) <- 0:17
# menage_en_mois$nafg17npr <- as.character(nafg17npr)
# menage_en_mois[is.na(menage_en_mois$nafg17npr), "nafg17npr" ] <- "-1" # Sans objet
# }
#
#TODO: TODO: pytohn translation needed
# if "naf16pr" in menage_en_mois.columns:
# naf16pr <- factor(menage_en_mois$naf16pr)
# levels(naf16pr) <- 0:16
# menage_en_mois$naf16pr <- as.character(naf16pr)
# menage_en_mois[is.na(menage_en_mois$naf16pr), "naf16pr" ] <- "-1" # Sans objet
# vars <- c(vars,"naf16pr")
# } else if ("nafg17npr" %in% names(menage_en_mois)) {
# # TODO: pb in 2008 with xx
# if (year == "2008"){
# menage_en_mois[ menage_en_mois$nafg17npr == "xx" & !is.na(menage_en_mois$nafg17npr), "nafg17npr"] <- "00"
# }
# nafg17npr <- factor(menage_en_mois$nafg17npr)
# levels(nafg17npr) <- 0:17
# menage_en_mois$nafg17npr <- as.character(nafg17npr)
# menage_en_mois[is.na(menage_en_mois$nafg17npr), "nafg17npr" ] <- "-1" # Sans objet
# }
# TODO: 2008tau99 is not present should be provided by 02_loy.... is it really needed
all_vars = vars + famille_vars
log.info("liste de toutes les variables : {}".format(all_vars))
log.info(menage_en_mois.info())
available_vars = list(
set(all_vars).intersection(set(menage_en_mois.columns)))
loyersMenages = menage_en_mois.xs(available_vars, axis=1)
#
# # Recodage de typmen15: modalités de 1:15
# table(loyersMenages$typmen15, useNA="ifany")
# loyersMenages <- within(loyersMenages, {
# typmen15[typmen15==10 ] <- 1
# typmen15[typmen15==11 ] <- 2
# typmen15[typmen15==21 ] <- 3
# typmen15[typmen15==22 ] <- 4
# typmen15[typmen15==23 ] <- 5
# typmen15[typmen15==31 ] <- 6
# typmen15[typmen15==32 ] <- 7
# typmen15[typmen15==33 ] <- 8
# typmen15[typmen15==41 ] <- 9
# typmen15[typmen15==42 ] <- 10
# typmen15[typmen15==43 ] <- 11
# typmen15[typmen15==44 ] <- 12
# typmen15[typmen15==51 ] <- 13
# typmen15[typmen15==52 ] <- 14
# typmen15[typmen15==53 ] <- 15
# })
#
#
# TODO: MBJ UNNECESSARY ?
#
# # Pb avec ddipl, pas de modalités 2: on décale les chaps >=3
# # Cependant on fait cela après avoir fait les traitement suivants
# table(loyersMenages$ddipl, useNA="ifany")
# # On convertit les ddipl en numeric
# loyersMenages$ddipl <- as.numeric(loyersMenages$ddipl)
# table(loyersMenages$ddipl, useNA="ifany")
# # On met les non renseignés ie, NA et "" à sans diplome (modalité 7)
# loyersMenages[is.na(loyersMenages$ddipl), "ddipl"] <- 7
#
# loyersMenages[loyersMenages$ddipl>1, "ddipl"] <- loyersMenages$ddipl[loyersMenages$ddipl>1]-1
#
log.info("{}".format(loyersMenages.info()))
loyersMenages.ddipl = where(loyersMenages.ddipl.isnull(), 7,
loyersMenages.ddipl)
loyersMenages.ddipl = where(loyersMenages.ddipl > 1,
loyersMenages.ddipl - 1, loyersMenages.ddipl)
loyersMenages.ddipl.astype("int32")
final['act5'] = NaN
final.act5 = where(final.actrec == 1, 2, final.act5) # indépendants
final.act5 = where(final.actrec.isin([2, 3]), 1, final.act5) # salariés
final.act5 = where(final.actrec == 4, 3, final.act5) # chômeur
final.act5 = where(final.actrec == 7, 4, final.act5) # retraité
final.act5 = where(final.actrec == 8, 5, final.act5) # autres inactifs
final.act5 = where(final.actrec == 1, 2, final.act5) # indépendants
final.act5 = where(final.actrec.isin([2, 3]), 1, final.act5) # salariés
final.act5 = where(final.actrec == 4, 3, final.act5) # chômeur
final.act5 = where(final.actrec == 7, 4, final.act5) # retraité
final.act5 = where(final.actrec == 8, 5, final.act5) # autres inactifs
log.info("{}".format(final.act5.value_counts()))
# assert final.act5.notnull().all(), 'there are NaN inside final.act5'
# final$wprm <- NULL # with the intention to extract wprm from menage to deal with FIPs
# final$taxe_habitation <- final$zthabm # rename zthabm to taxe_habitation
# final$zthabm <- NULL
#
# final2 <- merge(final, loyersMenages, by="idmen", all.x=TRUE)
log.info(' création de final2')
del final["wprm"]
gc.collect()
final.rename(columns=dict(zthabm="taxe_habitation"),
inplace=True) # rename zthabm to taxe_habitation
final2 = final.merge(loyersMenages, on="idmen", how="left") # TODO: Check
log.info("{}".format(loyersMenages.head()))
gc.collect()
print_id(final2)
# # TODO: merging with patrimoine
log.info(' traitement des zones apl')
import pkg_resources
openfisca_france_data_location = pkg_resources.get_distribution(
'openfisca-france-data').location
zone_apl_imputation_data_file_path = os.path.join(
openfisca_france_data_location,
'openfisca_france_data',
'zone_apl_data',
'zone_apl',
'zone_apl_imputation_data.csv',
)
apl_imp = read_csv(zone_apl_imputation_data_file_path)
log.info("{}".format(apl_imp.head(10)))
if year == 2008:
zone_apl = final2.xs(["tu99", "pol99", "reg"], axis=1)
else:
zone_apl = final2.xs(["tu99", "pol99", "tau99", "reg"], axis=1)
for i in range(len(apl_imp["TU99"])):
tu = apl_imp["TU99"][i]
pol = apl_imp["POL99"][i]
tau = apl_imp["TAU99"][i]
reg = apl_imp["REG"][i]
if year == 2008:
indices = (final2["tu99"] == tu) & (final2["pol99"]
== pol) & (final2["reg"] == reg)
selection = (apl_imp["TU99"] == tu) & (apl_imp["POL99"] == pol) & (
apl_imp["REG"] == reg)
else:
indices = (final2["tu99"] == tu) & (final2["pol99"] == pol) & (
final2["tau99"] == tau) & (final2["reg"] == reg)
selection = ((apl_imp["TU99"] == tu) & (apl_imp["POL99"] == pol) &
(apl_imp["TAU99"] == tau) & (apl_imp["REG"] == reg))
z = random.uniform(size=indices.sum())
log.info(len(z))
log.info(len(indices))
log.info(len(indices) / len(z))
probs = apl_imp[["proba_zone1", "proba_zone2"]][selection].copy()
log.info(probs)
log.info(probs['proba_zone1'].values)
proba_zone_1 = probs['proba_zone1'].values[0]
proba_zone_2 = probs['proba_zone2'].values[0]
final2["zone_apl"] = 3
final2["zone_apl"][indices] = (1 + (z > proba_zone_1) +
(z > (proba_zone_1 + proba_zone_2)))
del indices, probs
log.info(' performing cleaning on final2')
log.info('{} sali nuls'.format(len(final2[final2['sali'].isnull()])))
log.info("{} individus d'âges nuls".format(len(
final2[final2.age.isnull()])))
log.info("longueur de final2 avant purge : {}".format(len(final2)))
# columns_w_nan = []
# for col in final2.columns:
# if final2[final2['idfoy'].notnull()][col].isnull().any() and not final2[col].isnull().all():
# columns_w_nan.append(col)
# print columns_w_nan
log.info('check doublons : {}'.format(
len(final2[final2.duplicated(['noindiv'])])))
log.info("{}".format(final2.age.isnull().sum()))
# print final2.loc[final2.duplicated('noindiv'), ['noindiv', 'quifam']].to_string()
#TODO: JS: des chefs de famille et conjoints en double il faut trouver la source des ces doublons !
# final2 = final2.drop_duplicates(['noindiv'])
final2 = final2[~(final2.age.isnull())]
log.info(u"longueur de final2 après purge: {}".format(len(final2)))
print_id(final2)
#
# # var <- names(foyer)
# #a1 <- c('f7rb', 'f7ra', 'f7gx', 'f2aa', 'f7gt', 'f2an', 'f2am', 'f7gw', 'f7gs', 'f8td', 'f7nz', 'f1br', 'f7jy', 'f7cu', 'f7xi', 'f7xo', 'f7xn', 'f7xw', 'f7xy', 'f6hj', 'f7qt', 'f7ql', 'f7qm', 'f7qd', 'f7qb', 'f7qc', 'f1ar', 'f7my', 'f3vv', 'f3vu', 'f3vt', 'f7gu', 'f3vd', 'f2al', 'f2bh', 'f7fm', 'f8uy', 'f7td', 'f7gv', 'f7is', 'f7iy', 'f7il', 'f7im', 'f7ij', 'f7ik', 'f1er', 'f7wl', 'f7wk', 'f7we', 'f6eh', 'f7la', 'f7uh', 'f7ly', 'f8wy', 'f8wx', 'f8wv', 'f7sb', 'f7sc', 'f7sd', 'f7se', 'f7sf', 'f7sh', 'f7si', 'f1dr', 'f7hs', 'f7hr', 'f7hy', 'f7hk', 'f7hj', 'f7hm', 'f7hl', 'f7ho', 'f7hn', 'f4gc', 'f4gb', 'f4ga', 'f4gg', 'f4gf', 'f4ge', 'f7vz', 'f7vy', 'f7vx', 'f7vw', 'f7xe', 'f6aa', 'f1cr', 'f7ka', 'f7ky', 'f7db', 'f7dq', 'f2da')
# #a2 <- setdiff(a1,names(foyer))
# #b1 <- c('pondfin', 'alt', 'hsup', 'ass_mat', 'zone_apl', 'inactif', 'ass', 'aer', 'code_postal', 'activite', 'type_sal', 'jour_xyz', 'boursier', 'etr', 'partiel1', 'partiel2', 'empl_dir', 'gar_dom', 'categ_inv', 'opt_colca', 'csg_taux_plein','coloc')
# # hsup feuille d'impot
# # boursier pas dispo
# # inactif etc : extraire cela des donn?es clca etc
#
# # tester activit? car 0 vaut actif
# table(is.na(final2$activite),useNA="ifany")
#
# saveTmp(final2, file= "final2.Rdata")
control(final2, debug=True)
log.info(final2.age.isnull().sum())
final2 = final2.drop_duplicates(subset='noindiv')
log.info(' Filter to manage the new 3-tables structures:')
# On récupère les foyer, famille, ménages qui ont un chef :
liste_men = unique(final2.loc[final2['quimen'] == 0, 'idmen'].values)
liste_fam = unique(final2.loc[final2['quifam'] == 0, 'idfam'].values)
liste_foy = unique(final2.loc[final2['quifoy'] == 0, 'idfoy'].values)
#On ne conserve dans final2 que ces foyers là :
log.info('final2 avant le filtrage {}'.format(len(final2)))
final2 = final2.loc[final2.idmen.isin(liste_men), :]
final2 = final2.loc[final2.idfam.isin(liste_fam), :]
final2 = final2.loc[final2.idfoy.isin(liste_foy), :]
log.info('final2 après le filtrage {}'.format(len(final2)))
rectify_dtype(final2, verbose=False)
# home = os.path.expanduser("~")
# test_filename = os.path.join(home, filename + ".h5")
# if os.path.exists(test_filename):
# import warnings
# import datetime
# time_stamp = datetime.datetime.now().strftime('%Y_%m_%d_%H_%M')
# renamed_file = os.path.join(DATA_SOURCES_DIR, filename + "_" + time_stamp + ".h5")
# warnings.warn("A file with the same name already exists \n Renaming current output and saving to " + renamed_file)
# test_filename = renamed_file
data_frame = final2
if year == 2006: # Hack crade pur régler un problème rémanent
data_frame = data_frame[data_frame.idfam != 602177906].copy()
for id_variable in [
'idfam', 'idfoy', 'idmen', 'noi', 'quifam', 'quifoy', 'quimen'
]:
data_frame[id_variable] = data_frame[id_variable].astype('int')
check = False
if check:
check_structure(data_frame)
for entity_id in ['idmen', 'idfoy', 'idfam']:
data_frame = id_formatter(data_frame, entity_id)
set_variables_default_value(data_frame, year)
return data_frame
def create_totals_second_pass(temporary_store = None, year = None):
assert temporary_store is not None
assert year is not None
log.info(u" 5.1 : Elimination idfoy restant")
# Voiture balai
# On a plein d'idfoy vides, on fait 1 ménage = 1 foyer fiscal
indivi = temporary_store['indivi_step_06_{}'.format(year)]
idfoyList = indivi.loc[indivi.quifoy == "vous", 'idfoy'].unique()
indivi_without_idfoy = ~indivi.idfoy.isin(idfoyList)
indivi.loc[indivi_without_idfoy, 'quifoy'] = "pac"
indivi.loc[indivi_without_idfoy & (indivi.quimen == 0) & (indivi.age >= 18), 'quifoy'] = "vous"
indivi.loc[indivi_without_idfoy & (indivi.quimen == 0) & (indivi.age >= 18), 'idfoy'] = (
indivi.loc[indivi_without_idfoy, "idmen"].astype('int') * 100 + 51
)
indivi.loc[indivi_without_idfoy & (indivi.quimen == 1) & (indivi.age >= 18), 'quifoy'] = "conj"
del idfoyList
print_id(indivi)
# Sélectionne les variables à garder pour les steps suivants
variables = [
"actrec",
"age",
"age_en_mois",
"chpub",
"encadr",
"idfoy",
"idmen",
"nbsala",
"noi",
"noindiv",
"prosa",
"quelfic",
"quifoy",
"quimen",
"statut",
"titc",
"txtppb",
"wprm",
"rc1rev",
"maahe",
"sali",
"rsti",
"choi",
"alr",
"wprm",
]
assert set(variables).issubset(set(indivi.columns)), \
"Manquent les colonnes suivantes : {}".format(set(variables).difference(set(indivi.columns)))
dropped_columns = [variable for variable in indivi.columns if variable not in variables]
indivi.drop(dropped_columns, axis = 1, inplace = True)
# see http://stackoverflow.com/questions/11285613/selecting-columns
indivi.reset_index(inplace = True)
gc.collect()
# TODO les actrec des fip ne sont pas codées (on le fera à la fin quand on aura rassemblé
# les infos provenant des déclarations)
log.info(u"Etape 6 : Création des variables descriptives")
log.info(u" 6.1 : Variable activité")
log.info(u"Variables présentes; \n {}".format(indivi.columns))
indivi['activite'] = np.nan
indivi.loc[indivi.actrec <= 3, 'activite'] = 0
indivi.loc[indivi.actrec == 4, 'activite'] = 1
indivi.loc[indivi.actrec == 5, 'activite'] = 2
indivi.loc[indivi.actrec == 7, 'activite'] = 3
indivi.loc[indivi.actrec == 8, 'activite'] = 4
indivi.loc[indivi.age <= 13, 'activite'] = 2 # ce sont en fait les actrec=9
log.info("Valeurs prises par la variable activité \n {}".format(indivi['activite'].value_counts(dropna = False)))
# TODO: MBJ problem avec les actrec
# TODO: FIX AND REMOVE
indivi.loc[indivi.actrec.isnull(), 'activite'] = 5
indivi.loc[indivi.titc.isnull(), 'titc'] = 0
assert indivi.titc.notnull().all(), \
u"Problème avec les titc" # On a 420 NaN pour les varaibels statut, titc etc
log.info(u" 6.2 : Variable statut")
indivi.loc[indivi.statut.isnull(), 'statut'] = 0
indivi.statut = indivi.statut.astype('int')
indivi.loc[indivi.statut == 11, 'statut'] = 1
indivi.loc[indivi.statut == 12, 'statut'] = 2
indivi.loc[indivi.statut == 13, 'statut'] = 3
indivi.loc[indivi.statut == 21, 'statut'] = 4
indivi.loc[indivi.statut == 22, 'statut'] = 5
indivi.loc[indivi.statut == 33, 'statut'] = 6
indivi.loc[indivi.statut == 34, 'statut'] = 7
indivi.loc[indivi.statut == 35, 'statut'] = 8
indivi.loc[indivi.statut == 43, 'statut'] = 9
indivi.loc[indivi.statut == 44, 'statut'] = 10
indivi.loc[indivi.statut == 45, 'statut'] = 11
assert indivi.statut.isin(range(12)).all(), u"statut value over range"
log.info("Valeurs prises par la variable statut \n {}".format(
indivi['statut'].value_counts(dropna = False)))
log.info(u" 6.3 : variable txtppb")
indivi.loc[indivi.txtppb.isnull(), 'txtppb'] = 0
assert indivi.txtppb.notnull().all()
indivi.loc[indivi.nbsala.isnull(), 'nbsala'] = 0
indivi.nbsala = indivi.nbsala.astype('int')
indivi.loc[indivi.nbsala == 99, 'nbsala'] = 10
assert indivi.nbsala.isin(range(11)).all()
log.info("Valeurs prises par la variable txtppb \n {}".format(
indivi['txtppb'].value_counts(dropna = False)))
log.info(u" 6.4 : variable chpub et CSP")
indivi.loc[indivi.chpub.isnull(), 'chpub'] = 0
indivi.chpub = indivi.chpub.astype('int')
assert indivi.chpub.isin(range(11)).all()
indivi['cadre'] = 0
indivi.loc[indivi.prosa.isnull(), 'prosa'] = 0
assert indivi.prosa.notnull().all()
log.info("Valeurs prises par la variable encadr \n {}".format(indivi['encadr'].value_counts(dropna = False)))
# encadr : 1=oui, 2=non
indivi.loc[indivi.encadr.isnull(), 'encadr'] = 2
indivi.loc[indivi.encadr == 0, 'encadr'] = 2
assert indivi.encadr.notnull().all()
assert indivi.encadr.isin([1, 2]).all()
indivi.loc[indivi.prosa.isin([7, 8]), 'cadre'] = 1
indivi.loc[(indivi.prosa == 9) & (indivi.encadr == 1), 'cadre'] = 1
assert indivi.cadre.isin(range(2)).all()
log.info(
u"Etape 7: on vérifie qu'il ne manque pas d'info sur les liens avec la personne de référence"
)
log.info(
u"nb de doublons idfoy/quifoy {}".format(len(indivi[indivi.duplicated(subset = ['idfoy', 'quifoy'])]))
)
log.info(u"On crée les n° de personnes à charge dans le foyer fiscal")
assert indivi.idfoy.notnull().all()
print_id(indivi)
indivi['quifoy_bis'] = 2
indivi.loc[indivi.quifoy == 'vous', 'quifoy_bis'] = 0
indivi.loc[indivi.quifoy == 'conj', 'quifoy_bis'] = 1
indivi.loc[indivi.quifoy == 'pac', 'quifoy_bis'] = 2
del indivi['quifoy']
indivi['quifoy'] = indivi.quifoy_bis.copy()
del indivi['quifoy_bis']
print_id(indivi)
pac = indivi.loc[indivi['quifoy'] == 2, ['quifoy', 'idfoy', 'noindiv']].copy()
print_id(pac)
j = 2
while pac.duplicated(['quifoy', 'idfoy']).any():
pac.loc[pac.duplicated(['quifoy', 'idfoy']), 'quifoy'] = j
j += 1
print_id(pac)
indivi = indivi.merge(pac, on = ['noindiv', 'idfoy'], how = "left")
indivi['quifoy'] = indivi['quifoy_x']
indivi['quifoy'] = where(indivi['quifoy_x'] == 2, indivi['quifoy_y'], indivi['quifoy_x'])
del indivi['quifoy_x'], indivi['quifoy_y']
print_id(indivi)
del pac
assert len(indivi[indivi.duplicated(subset = ['idfoy', 'quifoy'])]) == 0, \
u"Il y a {} doublons idfoy/quifoy".format(
len(indivi[indivi.duplicated(subset = ['idfoy', 'quifoy'])])
)
print_id(indivi)
log.info(u"Etape 8 : création des fichiers totaux")
famille = temporary_store['famc_{}'.format(year)]
log.info(u" 8.1 : création de tot2 & tot3")
tot2 = indivi.merge(famille, on = 'noindiv', how = 'inner')
# TODO: MBJ increase in number of menage/foyer when merging with family ...
del famille
control(tot2, debug = True, verbose = True)
assert tot2.quifam.notnull().all()
temporary_store['tot2_{}'.format(year)] = tot2
del indivi
log.info(u" tot2 saved")
tot2 = tot2[tot2.idmen.notnull()].copy()
print_id(tot2)
tot3 = tot2
# TODO: check where they come from
log.info("Avant élimination des doublons noindiv: {}".format(len(tot3)))
tot3 = tot3.drop_duplicates(subset = 'noindiv')
log.info("Après élimination des doublons noindiv: {}".format(len(tot3)))
# Block to remove any unwanted duplicated pair
control(tot3, debug = True, verbose = True)
tot3 = tot3.drop_duplicates(subset = ['idfoy', 'quifoy'])
log.info("Après élimination des doublons idfoy, quifoy: {}".format(len(tot3)))
tot3 = tot3.drop_duplicates(subset = ['idfam', 'quifam'])
log.info("Après élimination des doublons idfam, 'quifam: {}".format(len(tot3)))
tot3 = tot3.drop_duplicates(subset = ['idmen', 'quimen'])
log.info("Après élimination des doublons idmen, quimen: {}".format(len(tot3)))
tot3 = tot3.drop_duplicates(subset = ['noindiv'])
control(tot3)
log.info(u" 8.2 : On ajoute les variables individualisables")
allvars = temporary_store['ind_vars_to_remove_{}'.format(year)]
vars2 = set(tot3.columns).difference(set(allvars))
tot3 = tot3[list(vars2)]
log.info("{}".format(len(tot3)))
assert not(tot3.duplicated(subset = ['noindiv']).any()), "doublon dans tot3['noindiv']"
lg_dup = len(tot3[tot3.duplicated(['idfoy', 'quifoy'])])
assert lg_dup == 0, "{} pairs of idfoy/quifoy in tot3 are duplicated".format(lg_dup)
temporary_store['tot3_{}'.format(year)] = tot3
control(tot3)
del tot2, allvars, tot3, vars2
gc.collect()
log.info(u"tot3 sauvegardé")
def final(temporary_store = None, year = None, check = True):
assert temporary_store is not None
assert year is not None
log.info(u'08_final: derniers réglages')
# On définit comme célibataires les individus dont on n'a pas retrouvé la déclaration
final = temporary_store['final_{}'.format(year)]
if year == 2009:
final = normalizes_roles_in_entity(final, 'foy')
final = normalizes_roles_in_entity(final, 'men')
if check:
check_structure(final)
final.statmarit.fillna(2, inplace = True)
# activite des fip
log.info(' gestion des FIP de final')
final_fip = final.loc[final.quelfic.isin(["FIP", "FIP_IMP"]), ["choi", "sali", "alr", "rsti", "age"]].copy()
log.info(set(["choi", "sali", "alr", "rsti"]).difference(set(final_fip.columns)))
for var in ["choi", "sali", "alr", "rsti"]:
final_fip[var].fillna(0, inplace = True)
assert final_fip[var].notnull().all(), "Some NaN are remaining in column {}".format(var)
final_fip["activite"] = 2 # TODO comment choisr la valeur par défaut ?
final_fip.activite = where(final_fip.choi > 0, 1, final_fip.activite)
final_fip.activite = where(final_fip.sali > 0, 0, final_fip.activite)
final_fip.activite = where(final_fip.age > 21, 2, final_fip.activite) # ne peuvent être rattachés que les étudiants
final.update(final_fip)
temporary_store['final_{}'.format(year)] = final
log.info("final has been updated with fip")
menagem = temporary_store['menagem_{}'.format(year)]
assert 'ident' in menagem.columns
assert 'so' in menagem.columns
menagem.rename(
columns = dict(ident = "idmen", so = "statut_occupation"),
inplace = True
)
menagem["cstotpragr"] = np.floor(menagem["cstotpr"] / 10)
# 2008 tau99 removed TODO: check ! and check incidence
variables = [
"champm",
"cstotpragr",
"ddipl",
"idmen",
"nbinde",
"pol99",
"reg",
"statut_occupation",
"tau99",
"tu99",
"typmen15",
"wprm",
"zthabm",
]
if year == 2008:
variables.remove("tau99")
famille_variables = ["m_afeamam", "m_agedm", "m_clcam", "m_colcam", 'm_mgamm', 'm_mgdomm']
if 'loyer' in menagem.columns:
variables.append('loyer')
# if ("naf16pr" %in% names(menagem)) {
# naf16pr <- factor(menagem$naf16pr)
# levels(naf16pr) <- 0:16
# menagem$naf16pr <- as.character(naf16pr)
# menagem[is.na(menagem$naf16pr), "naf16pr" ] <- "-1" # Sans objet
# variables <- c(variables,"naf16pr")
# } else if ("nafg17npr" %in% names(menagem)) {
# # TODO: pb in 2008 with xx
# if (year == "2008"){
# menagem[ menagem$nafg17npr == "xx" & !is.na(menagem$nafg17npr), "nafg17npr"] <- "00"
# }
# nafg17npr <- factor(menagem$nafg17npr)
# levels(nafg17npr) <- 0:17
# menagem$nafg17npr <- as.character(nafg17npr)
# menagem[is.na(menagem$nafg17npr), "nafg17npr" ] <- "-1" # Sans objet
# }
#
# TODO: pytohn translation needed
# if "naf16pr" in menagem.columns:
# naf16pr <- factor(menagem$naf16pr)
# levels(naf16pr) <- 0:16
# menagem$naf16pr <- as.character(naf16pr)
# menagem[is.na(menagem$naf16pr), "naf16pr" ] <- "-1" # Sans objet
# variables <- c(variables,"naf16pr")
# } else if ("nafg17npr" %in% names(menagem)) {
# # TODO: pb in 2008 with xx
# if (year == "2008"){
# menagem[ menagem$nafg17npr == "xx" & !is.na(menagem$nafg17npr), "nafg17npr"] <- "00"
# }
# nafg17npr <- factor(menagem$nafg17npr)
# levels(nafg17npr) <- 0:17
# menagem$nafg17npr <- as.character(nafg17npr)
# menagem[is.na(menagem$nafg17npr), "nafg17npr" ] <- "-1" # Sans objet
# }
# TODO: 2008tau99 is not present should be provided by 02_loy.... is it really needed
all_variables = variables + famille_variables
log.info("liste de toutes les variables : {}".format(all_variables))
log.info(menagem.info())
available_variables = list(set(all_variables).intersection(set(menagem.columns)))
log.info("liste des variables à extraire de menagem: {}".format(available_variables))
loyersMenages = menagem[available_variables].copy()
#
# # Recodage de typmen15: modalités de 1:15
# table(loyersMenages$typmen15, useNA="ifany")
# loyersMenages <- within(loyersMenages, {
# typmen15[typmen15==10 ] <- 1
# typmen15[typmen15==11 ] <- 2
# typmen15[typmen15==21 ] <- 3
# typmen15[typmen15==22 ] <- 4
# typmen15[typmen15==23 ] <- 5
# typmen15[typmen15==31 ] <- 6
# typmen15[typmen15==32 ] <- 7
# typmen15[typmen15==33 ] <- 8
# typmen15[typmen15==41 ] <- 9
# typmen15[typmen15==42 ] <- 10
# typmen15[typmen15==43 ] <- 11
# typmen15[typmen15==44 ] <- 12
# typmen15[typmen15==51 ] <- 13
# typmen15[typmen15==52 ] <- 14
# typmen15[typmen15==53 ] <- 15
# })
#
#
# TODO: MBJ UNNECESSARY ?
#
# # Pb avec ddipl, pas de modalités 2: on décale les chaps >=3
# # Cependant on fait cela après avoir fait les traitement suivants
# table(loyersMenages$ddipl, useNA="ifany")
# # On convertit les ddipl en numeric
# loyersMenages$ddipl <- as.numeric(loyersMenages$ddipl)
# table(loyersMenages$ddipl, useNA="ifany")
# # On met les non renseignés ie, NA et "" à sans diplome (modalité 7)
# loyersMenages[is.na(loyersMenages$ddipl), "ddipl"] <- 7
#
# loyersMenages[loyersMenages$ddipl>1, "ddipl"] <- loyersMenages$ddipl[loyersMenages$ddipl>1]-1
#
log.info("loyersMenages \n {}".format(loyersMenages.info()))
loyersMenages.ddipl = where(loyersMenages.ddipl.isnull(), 7, loyersMenages.ddipl)
loyersMenages.ddipl = where(loyersMenages.ddipl > 1,
loyersMenages.ddipl - 1,
loyersMenages.ddipl)
loyersMenages.ddipl = loyersMenages.ddipl.astype("int32")
final['act5'] = NaN
final.act5 = where(final.actrec == 1, 2, final.act5) # indépendants
final.act5 = where(final.actrec.isin([2, 3]), 1, final.act5) # salariés
final.act5 = where(final.actrec == 4, 3, final.act5) # chômeur
final.act5 = where(final.actrec == 7, 4, final.act5) # retraité
final.act5 = where(final.actrec == 8, 5, final.act5) # autres inactifs
log.info("Valeurs prises par act5: \n {}".format(final.act5.value_counts()))
# assert final.act5.notnull().all(), 'there are NaN inside final.act5'
# final$wprm <- NULL # with the intention to extract wprm from menage to deal with FIPs
# final$taxe_habitation <- final$zthabm # rename zthabm to taxe_habitation
# final$zthabm <- NULL
#
# final2 <- merge(final, loyersMenages, by="idmen", all.x=TRUE)
log.info(' création de final2')
del final["wprm"]
gc.collect()
final.rename(columns = dict(zthabm = "taxe_habitation"), inplace = True) # rename zthabm to taxe_habitation
final2 = final.merge(loyersMenages, on = "idmen", how = "left") # TODO: Check
log.info("{}".format(loyersMenages.head()))
gc.collect()
print_id(final2)
# # TODO: merging with patrimoine
log.info(' traitement des zones apl')
import pkg_resources
openfisca_france_data_location = pkg_resources.get_distribution('openfisca-france-data').location
zone_apl_imputation_data_file_path = os.path.join(
openfisca_france_data_location,
'openfisca_france_data',
'zone_apl_data',
'zone_apl',
'zone_apl_imputation_data.csv',
)
apl_imp = read_csv(zone_apl_imputation_data_file_path)
log.info("{}".format(apl_imp.head(10)))
if year == 2008:
zone_apl = final2.xs(["tu99", "pol99", "reg"], axis = 1)
else:
zone_apl = final2.xs(["tu99", "pol99", "tau99", "reg"], axis = 1)
for i in range(len(apl_imp["TU99"])):
tu = apl_imp["TU99"][i]
pol = apl_imp["POL99"][i]
tau = apl_imp["TAU99"][i]
reg = apl_imp["REG"][i]
if year == 2008:
indices = (final2["tu99"] == tu) & (final2["pol99"] == pol) & (final2["reg"] == reg)
selection = (apl_imp["TU99"] == tu) & (apl_imp["POL99"] == pol) & (apl_imp["REG"] == reg)
else:
indices = (final2["tu99"] == tu) & (final2["pol99"] == pol) & (final2["tau99"] == tau) & (final2["reg"] == reg)
selection = (
(apl_imp["TU99"] == tu) &
(apl_imp["POL99"] == pol) &
(apl_imp["TAU99"] == tau) &
(apl_imp["REG"] == reg)
)
z = random.uniform(size=indices.sum())
log.info(len(z))
log.info(len(indices))
log.info(len(indices) / len(z))
probs = apl_imp[["proba_zone1", "proba_zone2"]][selection].copy()
log.info(probs)
log.info(probs['proba_zone1'].values)
proba_zone_1 = probs['proba_zone1'].values[0]
proba_zone_2 = probs['proba_zone2'].values[0]
final2["zone_apl"] = 3
final2.zone_apl.loc[indices] = (
1 + (z > proba_zone_1) + (z > (proba_zone_1 + proba_zone_2))
)
del indices, probs
log.info(' performing cleaning on final2')
log.info('{} sali nuls'.format(len(final2[final2['sali'].isnull()])))
log.info("{} individus d'âges nuls".format(len(final2[final2.age.isnull()])))
log.info("longueur de final2 avant purge : {}".format(len(final2)))
# columns_w_nan = []
# for col in final2.columns:
# if final2[final2['idfoy'].notnull()][col].isnull().any() and not final2[col].isnull().all():
# columns_w_nan.append(col)
# print columns_w_nan
log.info('check doublons : {}'.format(len(final2[final2.duplicated(['noindiv'])])))
log.info("{}".format(final2.age.isnull().sum()))
print_id(final2)
# # var <- names(foyer)
# #a1 <- c('f7rb', 'f7ra', 'f7gx', 'f2aa', 'f7gt', 'f2an', 'f2am', 'f7gw', 'f7gs', 'f8td', 'f7nz', 'f1br', 'f7jy', 'f7cu', 'f7xi', 'f7xo', 'f7xn', 'f7xw', 'f7xy', 'f6hj', 'f7qt', 'f7ql', 'f7qm', 'f7qd', 'f7qb', 'f7qc', 'f1ar', 'f7my', 'f3vv', 'f3vu', 'f3vt', 'f7gu', 'f3vd', 'f2al', 'f2bh', 'f7fm', 'f8uy', 'f7td', 'f7gv', 'f7is', 'f7iy', 'f7il', 'f7im', 'f7ij', 'f7ik', 'f1er', 'f7wl', 'f7wk', 'f7we', 'f6eh', 'f7la', 'f7uh', 'f7ly', 'f8wy', 'f8wx', 'f8wv', 'f7sb', 'f7sc', 'f7sd', 'f7se', 'f7sf', 'f7sh', 'f7si', 'f1dr', 'f7hs', 'f7hr', 'f7hy', 'f7hk', 'f7hj', 'f7hm', 'f7hl', 'f7ho', 'f7hn', 'f4gc', 'f4gb', 'f4ga', 'f4gg', 'f4gf', 'f4ge', 'f7vz', 'f7vy', 'f7vx', 'f7vw', 'f7xe', 'f6aa', 'f1cr', 'f7ka', 'f7ky', 'f7db', 'f7dq', 'f2da')
# #a2 <- setdiff(a1,names(foyer))
# #b1 <- c('pondfin', 'alt', 'hsup', 'ass_mat', 'zone_apl', 'inactif', 'ass', 'aer', 'code_postal', 'activite', 'type_sal', 'jour_xyz', 'boursier', 'etr', 'partiel1', 'partiel2', 'empl_dir', 'gar_dom', 'categ_inv', 'opt_colca', 'csg_taux_plein','coloc')
# # hsup feuille d'impot
# # boursier pas dispo
# # inactif etc : extraire cela des donn?es clca etc
#
# # tester activit? car 0 vaut actif
# table(is.na(final2$activite),useNA="ifany")
#
# saveTmp(final2, file= "final2.Rdata")
control(final2, debug = True)
temporary_store['final2'] = final2
log.info("Nombre de personne d'âge NaN: {} ".format(final2.age.isnull().sum()))
final2 = final2.drop_duplicates(subset = 'noindiv')
log.info(' Filter to manage the new 3-tables structures:')
# On récupère les foyer, famille, ménages qui ont un chef :
# On ne conserve dans final2 que ces foyers là :
log.info('final2 avant le filtrage {}'.format(len(final2)))
print_id(final2)
liste_fam = final2.loc[final2['quifam'] == 0, 'idfam'].unique()
log.info("Dropping {} famille".format((~final2.idfam.isin(liste_fam)).sum()))
final2 = final2.loc[final2.idfam.isin(liste_fam)].copy()
if check:
check_structure(final2)
temporary_store['final2bis'] = final2
liste_foy = final2.loc[final2['quifoy'] == 0, 'idfoy'].unique()
log.info("Dropping {} foyers".format((~final2.idfoy.isin(liste_foy)).sum()))
final2 = final2.loc[final2.idfoy.isin(liste_foy)].copy()
liste_men = final2.loc[final2['quimen'] == 0, 'idmen'].unique()
log.info(u"Dropping {} ménages".format((~final2.idmen.isin(liste_men)).sum()))
final2 = final2.loc[final2.idmen.isin(liste_men)].copy()
log.info('final2 après le filtrage {}'.format(len(final2)))
print_id(final2)
rectify_dtype(final2, verbose = False)
# home = os.path.expanduser("~")
# test_filename = os.path.join(home, filename + ".h5")
# if os.path.exists(test_filename):
# import warnings
# import datetime
# time_stamp = datetime.datetime.now().strftime('%Y_%m_%d_%H_%M')
# renamed_file = os.path.join(DATA_SOURCES_DIR, filename + "_" + time_stamp + ".h5")
# warnings.warn("A file with the same name already exists \n Renaming current output and saving to " + renamed_file)
# test_filename = renamed_file
data_frame = final2
temporary_store['final3'] = data_frame
assert not data_frame.duplicated(['idmen', 'quimen']).any(), 'bad ménages indexing'
if year == 2006: # Hack crade pur régler un problème rémanent
data_frame = data_frame[data_frame.idfam != 602177906].copy()
for id_variable in ['idfam', 'idfoy', 'idmen', 'noi', 'quifam', 'quifoy', 'quimen']:
data_frame[id_variable] = data_frame[id_variable].astype('int')
gc.collect()
if check:
check_structure(data_frame)
temporary_store['final4'] = data_frame
assert not data_frame.duplicated(['idmen', 'quimen']).any(), 'bad ménages indexing'
gc.collect()
for entity_id in ['idmen', 'idfoy', 'idfam']:
log.info('Reformat ids: {}'.format(entity_id))
data_frame = id_formatter(data_frame, entity_id)
assert not data_frame.duplicated(['idmen', 'quimen']).any(), 'bad ménages indexing'
log.info('Dealing with loyer')
if 'loyer' in data_frame.columns:
assert 'loyer' in data_frame.columns
data_frame.loyer = data_frame.loyer * 12.0
log.info('Set variables to their default values')
set_variables_default_value(data_frame, year)
print_id(data_frame)
temporary_store['input_{}'.format(year)] = data_frame
return data_frame
def invalide(temporary_store = None, year = None):
assert temporary_store is not None
assert year is not None
log.info(u"Entering 07_invalides: construction de la variable invalide")
# # # Invalides
# # #invalide = caseP (vous), caseF (conj) ou case G, caseI, ou caseR (pac)
# # loadTmp("final.Rdata")
# # invalides <- final[,c("noindiv","idmen","caseP","caseF","idfoy","quifoy")]
# # invalides <- within(invalides,{
# # caseP <- ifelse(is.na(caseP),0,caseP)
# # caseF <- ifelse(is.na(caseF),0,caseF)
# # invalide <- FALSE})
# # # Les "vous" invalides
# # table(invalides[,c("caseF","quifoy")],useNA="ifany")
# # invalides[(invalides$caseP==1) & (invalides$quifoy=="vous"),"invalide"] <- TRUE
# #
log.info(u"Etape 1 : création de la df invalides")
log.info(u" 1.1 : déclarants invalides")
final = temporary_store['final_{}'.format(year)]
if "invalide" in final:
# on drop les colones inv et alt au cas ou on aurait déjà lancé le step07
final.drop(["invalide", "alt"], axis = 1, inplace = True)
invalides_vars = [
"caseF",
"caseP",
"idfoy",
"idmen",
"noindiv",
"quifoy",
]
aah_eec_variables = ["rc1rev", "maahe"]
aah_eec = False
if set(aah_eec_variables) < set(final.columns):
aah_eec = True
invalides_vars += aah_eec_variables
assert set(invalides_vars) < set(final.columns), \
"Variables {} are missing".format(set(invalides_vars).difference(set(final.columns)))
invalides = final.xs(invalides_vars, axis = 1).copy()
invalides['invalide'] = False
invalides['alt'] = False
for var in ["caseP", "caseF"]:
assert invalides[var].notnull().all(), 'NaN values in {}'.format(var)
# Les déclarants invalides
invalides.loc[(invalides['caseP'] == 1) & (invalides['quifoy'] == 0), 'invalide'] = True
log.info(u"Il y a {} invalides déclarants".format(invalides["invalide"].sum()))
# Les personnes qui touchent l'aah dans l'enquête emploi
if aah_eec:
log.info(u"Inspecting rc1rev")
log.info(invalides['rc1rev'].value_counts())
invalides.loc[invalides.maahe > 0, 'invalide'] = True
invalides.loc[invalides.rc1rev == 4, 'invalide'] = True # TODO: vérifier le format.
# TODO: invalides.rc1rev.astype("str") voir mai mahdi pour pendre en compte 14 24 etc
log.info(u"Il y a {} invalides qui touchent des alloc".format(invalides["invalide"].sum()))
print_id(invalides)
# # # Les conjoints invalides
# #
# # #men_inv_conj <- invalides[c("idmen","caseF","quifoy")]
# # #men_inv_conj <- rename(men_inv_conj, c("caseF"="invalide"))
# # #table(men_inv_conj[men_inv_conj$inv==1 ,c("invalide","quifoy")],useNA="ifany")
# # # Il y a des caseF suir des conjoints cela vint des doubles d?clarations TODO: shoumd clean this
# # #toto <- invalides[invalides$caseF==1 & invalides$quifoy=="conj","idmen"]
# # #load(indm)
# # #titi <- indivim[(indivim$ident %in% toto) & (indivim$persfip=="vous" |indivim$persfip=="conj") ,c("ident","noindiv","declar1","declar2","persfip","quelfic")]
# # #titi <- titi[order(titi$ident),]
# # foy_inv_conj <- invalides[,c("idfoy","caseF","quifoy")]
# # foy_inv_conj <- rename(foy_inv_conj, c("caseF"="invalide"))
# # table(foy_inv_conj[ ,c("invalide","quifoy")],useNA="ifany")
# # # On ne garde donc que les caseF des "vous"
# # foy_inv_conj <- foy_inv_conj[foy_inv_conj$quifoy=="vous",c("idfoy","invalide")]
# # table(foy_inv_conj[ ,c("invalide")],useNA="ifany")
# # invalides_conj <- invalides[invalides$quifoy=="conj",c("idfoy","noindiv")]
# # invalides_conj <- merge(invalides_conj, foy_inv_conj, by="idfoy", all.x=TRUE)
# # table(invalides_conj$inv) # TODO en 2006 On en a 316 au lieu de 328 il doit y avoir de idfoy avec caseF qui n'ont pas de vous because double déclaration'
# # invalides[invalides$quifoy=="conj",c("idfoy","noindiv","invalide")] <- invalides_conj
# # table(invalides[,c("invalide","quifoy")],useNA="ifany")
# # rm(invalides_conj,foy_inv_conj)
# On récupère les idfoy des foyers avec une caseF cochée
log.info(' 1.2 : Les conjoints invalides')
idfoy_inv_conj = final.idfoy[final.caseF].copy()
inv_conj_condition = (invalides.idfoy.isin(idfoy_inv_conj) & (invalides.quifoy == 1))
invalides.loc[inv_conj_condition, "invalide"] = True
log.info(u"Il y a {} invalides conjoints".format(len(invalides[inv_conj_condition])))
log.info(u" Il y a {} invalides déclarants et invalides conjoints".format(invalides["invalide"].sum()))
# Enfants invalides et garde alternée
# #
# # loadTmp("pacIndiv.Rdata")
# # foy_inv_pac <- invalides[!(invalides$quifoy %in% c("vous","conj")),c("invalide","noindiv")]
# # foy_inv_pac <- merge(foy_inv_pac, pacIndiv[,c("noindiv","typ","naia")], by="noindiv",all.x =TRUE)
# # names(foy_inv_pac)
# # table(foy_inv_pac[,c("typ","naia")],useNA="ifany")
# # table(foy_inv_pac[,c("typ")],useNA="ifany")
# # foy_inv_pac <- within(foy_inv_pac,{
# # invalide <- (typ=="G") | (typ=="R") | (typ=="I") | (typ=="F" & (as.numeric(year)-naia>18))
# # alt <- (typ=="H") | (typ=="I")
# # naia <- NULL
# # typ <- NULL})
# #
# # table(foy_inv_pac[ ,c("invalide")],useNA="ifany")
# # table(foy_inv_pac[ ,c("alt")],useNA="ifany")
# # invalides$alt <- 0
# # foy_inv_pac[is.na(foy_inv_pac$alt),"alt"] <- 0
# # invalides[!(invalides$quifoy %in% c("vous","conj")),c("noindiv","invalide","alt")] <- foy_inv_pac
log.info(u" 1.3 : enfants invalides et en garde alternée (variables inv et alt)")
pacIndiv = temporary_store['pacIndiv_{}'.format(year)]
# print pacIndiv.type_pac.value_counts()
log.info(pacIndiv.type_pac.value_counts())
foy_inv_pac = invalides[['noindiv', 'invalide']][~(invalides.quifoy.isin([0, 1]))].copy()
# pac = pacIndiv.ix[:, ["noindiv", "type_pac", "naia"]]
log.info("{}".format(len(foy_inv_pac)))
log.info("{}".format(pacIndiv.columns))
foy_inv_pac = foy_inv_pac.merge(
pacIndiv[['noindiv', 'type_pac', 'naia']].copy(),
on = 'noindiv',
how = 'left',
)
foy_inv_pac['invalide'] = (
foy_inv_pac['type_pac'].isin(['G', 'R', 'I']) |
(
(foy_inv_pac.type_pac == "F") & ((year - foy_inv_pac.naia) > 18)
)
)
foy_inv_pac['alt'] = ((foy_inv_pac.type_pac == "H") | (foy_inv_pac.type_pac == "I"))
del foy_inv_pac['naia']
del foy_inv_pac['type_pac']
foy_inv_pac['alt'] = foy_inv_pac['alt'].fillna(False)
log.info("{}".format(foy_inv_pac['invalide'].describe()))
invalides.loc[:, 'alt'] = False
invalides.loc[~(invalides.quifoy.isin([0, 1])), ["alt", "invalide"]] = foy_inv_pac[["alt", "invalide"]].copy().values
invalides = invalides[["noindiv", "invalide", 'alt']].copy()
invalides['alt'].fillna(False, inplace = True)
log.info(invalides.invalide.value_counts())
# invalides = invalides.drop_duplicates(['noindiv', 'invalide', 'alt'], take_last = True)
del foy_inv_pac, pacIndiv
# Initialisation des NA sur alt et inv
# invalides[is.na(invalides$inv), "invalide"] <- 0
# table(invalides[,c("alt","invalide")],useNA="ifany")
#
# final <- merge(final, invalides[,c("noindiv","invalide","alt")], by="noindiv",all.x=TRUE)
# table(final[, c("invalide","alt")],useNA="ifany")
log.info('Etape 2 : Initialisation des NA sur alt et inv')
assert invalides.invalide.notnull().all() & invalides.alt.notnull().all()
final.set_index('noindiv', inplace = True, verify_integrity = True)
invalides.set_index('noindiv', inplace = True, verify_integrity = True)
final = final.join(invalides)
final.reset_index(inplace = True)
del invalides
log.info("{}".format(final.invalide.value_counts()))
control(final, debug = True)
temporary_store['final_{}'.format(year)] = final
log.info(u'final complétée et sauvegardée')
