def __gds_to_row(gds: dict):
gds_id = gds['name']
title = gds['title']
organism = gds['sample_organism']
samples = len(get_samples(gds))
features = gds['variables']
genes = gds['genes']
subsets = len(gds['subsets'])
pubmed = gds.get('pubmed_id', '')
pubmed_id = pubmed
if isinstance(pubmed, list) and len(pubmed) > 0:
pubmed_id = pubmed[0]
return [
' ' if is_cached(gds_id) else '',
gds_id,
pubmed_id,
organism,
samples,
features,
genes,
subsets,
title,
]
def update_cache_indicator(self):
self.table[:, 0] = [
' ' if is_cached(gid) else ''
for gid in self.table[:, self.gds_id_col]
]