def test_diff_prop_same_name_same_object_diff_value_same_id(self):
do = self.ctx.DataObject(ident=R.URIRef("http://example.org"))
c = DataObject.DatatypeProperty("boots", do)
c1 = DataObject.DatatypeProperty("boots", do)
c('partition')
c1('join')
self.assertEqual(c.identifier, c1.identifier)
def test_asserts_query_multiple(self):
""" Show that setting the evidence with distinct objects yields
distinct results """
r = DataObject(key='relationship')
ar = DataObject(key='aref')
br = DataObject(key='bref')
e = self.ctx.Evidence(key="a", reference=ar)
e.supports(r)
self.save()
e1 = self.ctx.Evidence(key="b", reference=br)
e1.supports(r)
self.save()
e0 = self.ctx.Evidence()
e0.supports(r)
for x in e0.load():
lar = x.reference.one()
lbr = x.reference.one()
# Testing that either a has a result [email protected] and y has nothing or
# y has a result 1999 and a has nothing
if x.idl == e1.idl:
self.assertEqual(lbr.identifier, br.identifier)
elif x.idl == e.idl:
self.assertEqual(lar.identifier, ar.identifier)
else:
self.fail("Unknown object returned from load")
def test_diff_value_diff_id_equal(self):
do = self.ctx.DataObject(ident=R.URIRef("http://example.org"))
do1 = self.ctx.DataObject(ident=R.URIRef("http://example.org"))
c = DataObject.DatatypeProperty("boots", do)
c1 = DataObject.DatatypeProperty("boots", do1)
do.boots('join')
do1.boots('partition')
self.assertEqual(c.identifier, c1.identifier)
def test_cls_object_from_id_type(self):
'''
Calling object_from_id on the class should search for the rdf_type
'''
ctx = Mock()
DataObject.contextualize(ctx).object_from_id(
'http://openworm.org/some_rdf_type')
ctx.resolve_class.assert_called()
def test_same_value_same_id_not_empty_object_property(self):
do = self.ctx.DataObject(ident=R.URIRef("http://example.org"))
do1 = self.ctx.DataObject(ident=R.URIRef("http://example.org"))
dz = self.ctx.DataObject(ident=R.URIRef("http://example.org/vip"))
dz1 = self.ctx.DataObject(ident=R.URIRef("http://example.org/vip"))
c = DataObject.ObjectProperty("boots", do)
c1 = DataObject.ObjectProperty("boots", do1)
do.boots(dz)
do1.boots(dz1)
self.assertEqual(c.identifier, c1.identifier)
def test_diff_value_insert_order_same_id(self):
do = self.ctx.DataObject(ident=R.URIRef("http://example.org"))
do1 = self.ctx.DataObject(ident=R.URIRef("http://example.org"))
print(list(self.context.contents_triples()))
c = DataObject.DatatypeProperty("boots", do, multiple=True)
c1 = DataObject.DatatypeProperty("boots", do1, multiple=True)
do.boots('join')
do.boots('simile')
do.boots('partition')
do1.boots('partition')
do1.boots('join')
do1.boots('simile')
self.assertEqual(c.identifier, c1.identifier)
def test_statements_staged(self):
'''
Statements have the Context included as a regular attribute, so we don't filter
by the property's current context.
The property's `rdf` attribute evals to the context's staged graph, so we get an
"extra" entry from the context
'''
do = self.ctx.DataObject(ident=R.URIRef("http://example.org"))
ctx = Context('http://example.org/ctx/')
do.birds = DataObject.DatatypeProperty(multiple=True)
ctx(do).birds(4)
do.birds(5)
stmts = list(do.birds.statements)
for s in stmts:
print(s.to_quad())
# Split up into 3 asserts so you can actually read pytest' error print-out...
assert stmts[0] == Statement(do, do.birds, PropertyValue(R.Literal(4)),
ctx)
assert stmts[1] == Statement(do, do.birds, PropertyValue(R.Literal(5)),
self.context)
# These statements are not actually equal because statements mints a new Context
# for what it retrieves from the RDF graph (it has to)
assert stmts[2].to_quad() == Statement(do, do.birds,
PropertyValue(R.Literal(5)),
self.context).to_quad()
def test_asserts(self):
"""
Asserting something should allow us to get it back.
"""
e = self.ctx.Evidence(key='WBPaper00044600')
r = DataObject(key="context_data_object")
e.supports(r)
s = list(e.supports.get())
self.assertIn(r, s)
def test_property_get_returns_collection(self):
"""
This is for issue #175.
"""
do = self.ctx.DataObject(ident=R.URIRef("http://example.org"))
do.boots = DataObject.DatatypeProperty(multiple=True)
do.boots(4)
# self.save()
do = self.ctx.DataObject(ident=R.URIRef("http://example.org"))
do.boots = DataObject.DatatypeProperty(multiple=True)
x = do.boots()
l1 = list(x)
print(l1)
b = list(x)
self.assertEqual([4], b)
def test_asserts_query(self):
""" Show that we can store the evidence on an object and later retrieve it """
e = self.ctx.Evidence(key="a")
r = DataObject(key="relationship")
e.supports(r)
self.save()
e0 = self.ctx.Evidence()
e0.supports(r)
s = list(e0.load_terms())
self.assertIn(e.identifier, s)
def test_object_property_diff_value_insert_order_same_id(self):
do = self.ctx.DataObject(ident=R.URIRef("http://example.org"))
do1 = self.ctx.DataObject(ident=R.URIRef("http://example.org"))
oa = self.ctx.DataObject(ident=R.URIRef("http://example.org/a"))
ob = self.ctx.DataObject(ident=R.URIRef("http://example.org/b"))
oc = self.ctx.DataObject(ident=R.URIRef("http://example.org/c"))
c = DataObject.ObjectProperty("boots", do, multiple=True)
c1 = DataObject.ObjectProperty("boots", do1, multiple=True)
do.boots(oa)
do.boots(ob)
do.boots(oc)
do1.boots(oc)
do1.boots(oa)
do1.boots(ob)
self.assertEqual(c.identifier, c1.identifier)
def setUp(self):
super(Issue211EvidenceTest, self).setUp()
self.e1 = self.ctx.Evidence()
self.e2 = self.ctx.Evidence()
c = DataObject(key='23')
self.e1.supports(c)
self.e2.supports(c)
self.evs = self.context.stored(Evidence)()
self.evs.supports(c)
self.expected_ids = set(['777', '888'])
def test_defined_statements_across_contexts_datatype_property(self):
'''
Statements have the Context included as a regular attribute, so we don't filter
by the property's current context
'''
do = self.ctx.DataObject(ident=R.URIRef("http://example.org"))
ctx = Context('http://example.org/ctx/')
do.birds = DataObject.DatatypeProperty(multiple=True)
ctx(do).birds(4)
do.birds(5)
stmts = list(ctx(do).birds.defined_statements)
assert stmts == [
Statement(do, do.birds, PropertyValue(R.Literal(4)), ctx),
Statement(do, do.birds, PropertyValue(R.Literal(5)), self.context)
]
def test_defined_statements_across_contexts_object_property(self):
'''
Statements have the Context included as a regular attribute, so we don't filter
by the property's current context
'''
do = self.ctx.DataObject(ident=R.URIRef("http://example.org/1"))
ctx = Context('http://example.org/ctx/')
do.bugs = DataObject.ObjectProperty(multiple=True)
dp = self.ctx.DataObject(ident=R.URIRef("http://example.org/2"))
ctx(do).bugs(do)
do.bugs(dp)
stmts = list(ctx(do).bugs.defined_statements)
assert stmts == [
Statement(do, do.bugs, do, ctx),
Statement(do, do.bugs, dp, self.context)
]
def test_statements_query_empty(self):
'''
Statements have the Context included as a regular attribute, so we don't filter
by the property's current context.
The property's `rdf` attribute evals to the context's staged graph, so we get an
"extra" entry from the context
'''
do = self.ctx.DataObject(ident=R.URIRef("http://example.org"))
ctx = Context('http://example.org/ctx/')
do.birds = DataObject.DatatypeProperty(multiple=True)
ctx(do).birds(4)
do.birds(5)
stmts = list(Context('http://example.org/ctx/')(do).birds.statements)
assert stmts == [
Statement(do, do.birds, PropertyValue(R.Literal(4)), ctx),
Statement(do, do.birds, PropertyValue(R.Literal(5)), self.context)
]
def test_context_setter(self):
a = DataObject()
a.context = 42
self.assertEquals(a.context, 42)
def test_rdfs_comment_property(self):
a = DataObject(rdfs_comment='Hello')
self.assertIn('Hello', a.rdfs_comment())
def test_context_getter(self):
a = DataObject()
self.assertIsNone(a.context)
def test_DataUser(self):
do = DataObject()
self.assertTrue(isinstance(do, DataUser))
def test_identifier(self):
""" Test that we can set and return an identifier """
do = DataObject(ident="http://example.org")
self.assertEqual(do.identifier, R.URIRef("http://example.org"))
def test_same_value_same_id_empty(self):
do = self.ctx.DataObject(ident=R.URIRef("http://example.org"))
do1 = self.ctx.DataObject(ident=R.URIRef("http://example.org"))
c = DataObject.DatatypeProperty("boots", do)
c1 = DataObject.DatatypeProperty("boots", do1)
self.assertEqual(c.identifier, c1.identifier)
def test_repr(self):
self.assertRegexpMatches(
repr(DataObject(ident="http://example.com")),
r"DataObject\(ident=rdflib\.term\.URIRef\("
r"u?[\"']http://example.com[\"']\)\)")
def test_references(self):
self.e1.reference(DataObject(ident='777'))
self.e2.reference(DataObject(ident='888'))
self.save()
loaded_ids = set(str(x.identifier) for x in self.evs.reference.get())
self.assertTrue(self.expected_ids.issubset(loaded_ids))