def run_dataset(self):
"""
Read the data from dataset and calculate the accurary of the inference model.
"""
dataset = get_dataset(self.args)
input_names = self.predictor.get_input_names()
input_handle = self.predictor.get_input_handle(input_names[0])
output_names = self.predictor.get_output_names()
output_handle = self.predictor.get_output_handle(output_names[0])
intersect_area_all = 0
pred_area_all = 0
label_area_all = 0
total_time = 0
progbar_val = progbar.Progbar(target=len(dataset), verbose=1)
for idx, (img, label) in enumerate(dataset):
data = np.array([img])
input_handle.reshape(data.shape)
input_handle.copy_from_cpu(data)
start_time = time.time()
self.predictor.run()
end_time = time.time()
total_time += (end_time - start_time)
pred = output_handle.copy_to_cpu()
pred = self._postprocess(pred)
pred = paddle.to_tensor(pred, dtype='int64')
label = paddle.to_tensor(label, dtype="int32")
if pred.shape != label.shape:
label = paddle.unsqueeze(label, 0)
label = F.interpolate(label, pred.shape[-2:])
label = paddle.squeeze(label, 0)
intersect_area, pred_area, label_area = metrics.calculate_area(
pred,
label,
dataset.num_classes,
ignore_index=dataset.ignore_index)
intersect_area_all = intersect_area_all + intersect_area
pred_area_all = pred_area_all + pred_area
label_area_all = label_area_all + label_area
progbar_val.update(idx + 1)
class_iou, miou = metrics.mean_iou(intersect_area_all, pred_area_all,
label_area_all)
class_acc, acc = metrics.accuracy(intersect_area_all, pred_area_all)
kappa = metrics.kappa(intersect_area_all, pred_area_all, label_area_all)
logger.info(
"[EVAL] #Images: {} mIoU: {:.4f} Acc: {:.4f} Kappa: {:.4f} ".format(
len(dataset), miou, acc, kappa))
logger.info("[EVAL] Class IoU: \n" + str(np.round(class_iou, 4)))
logger.info("[EVAL] Class Acc: \n" + str(np.round(class_acc, 4)))
logger.info("[EVAL] Average time: %.3f ms/img" %
(total_time / len(dataset)) * 1000)
def evaluate(model,
eval_dataset,
aug_eval=False,
scales=1.0,
flip_horizontal=True,
flip_vertical=False,
is_slide=False,
stride=None,
crop_size=None,
num_workers=0,
print_detail=True):
"""
Launch evalution.
Args:
model（nn.Layer): A sementic segmentation model.
eval_dataset (paddle.io.Dataset): Used to read and process validation datasets.
aug_eval (bool, optional): Whether to use mulit-scales and flip augment for evaluation. Default: False.
scales (list|float, optional): Scales for augment. It is valid when `aug_eval` is True. Default: 1.0.
flip_horizontal (bool, optional): Whether to use flip horizontally augment. It is valid when `aug_eval` is True. Default: True.
flip_vertical (bool, optional): Whether to use flip vertically augment. It is valid when `aug_eval` is True. Default: False.
is_slide (bool, optional): Whether to evaluate by sliding window. Default: False.
stride (tuple|list, optional): The stride of sliding window, the first is width and the second is height.
It should be provided when `is_slide` is True.
crop_size (tuple|list, optional): The crop size of sliding window, the first is width and the second is height.
It should be provided when `is_slide` is True.
num_workers (int, optional): Num workers for data loader. Default: 0.
print_detail (bool, optional): Whether to print detailed information about the evaluation process. Default: True.
Returns:
float: The mIoU of validation datasets.
float: The accuracy of validation datasets.
"""
model.eval()
nranks = paddle.distributed.ParallelEnv().nranks
local_rank = paddle.distributed.ParallelEnv().local_rank
if nranks > 1:
# Initialize parallel environment if not done.
if not paddle.distributed.parallel.parallel_helper._is_parallel_ctx_initialized(
):
paddle.distributed.init_parallel_env()
batch_sampler = paddle.io.DistributedBatchSampler(eval_dataset,
batch_size=1,
shuffle=False,
drop_last=False)
loader = paddle.io.DataLoader(
eval_dataset,
batch_sampler=batch_sampler,
num_workers=num_workers,
return_list=True,
)
total_iters = len(loader)
intersect_area_all = 0
pred_area_all = 0
label_area_all = 0
if print_detail:
logger.info(
"Start evaluating (total_samples={}, total_iters={})...".format(
len(eval_dataset), total_iters))
progbar_val = progbar.Progbar(target=total_iters, verbose=1)
reader_cost_averager = TimeAverager()
batch_cost_averager = TimeAverager()
batch_start = time.time()
with paddle.no_grad():
for iter, (im, label) in enumerate(loader):
reader_cost_averager.record(time.time() - batch_start)
label = label.astype('int64')
ori_shape = label.shape[-2:]
if aug_eval:
pred = infer.aug_inference(
model,
im,
ori_shape=ori_shape,
transforms=eval_dataset.transforms.transforms,
scales=scales,
flip_horizontal=flip_horizontal,
flip_vertical=flip_vertical,
is_slide=is_slide,
stride=stride,
crop_size=crop_size)
else:
pred = infer.inference(
model,
im,
ori_shape=ori_shape,
transforms=eval_dataset.transforms.transforms,
is_slide=is_slide,
stride=stride,
crop_size=crop_size)
intersect_area, pred_area, label_area = metrics.calculate_area(
pred,
label,
eval_dataset.num_classes,
ignore_index=eval_dataset.ignore_index)
# Gather from all ranks
if nranks > 1:
intersect_area_list = []
pred_area_list = []
label_area_list = []
paddle.distributed.all_gather(intersect_area_list,
intersect_area)
paddle.distributed.all_gather(pred_area_list, pred_area)
paddle.distributed.all_gather(label_area_list, label_area)
# Some image has been evaluated and should be eliminated in last iter
if (iter + 1) * nranks > len(eval_dataset):
valid = len(eval_dataset) - iter * nranks
intersect_area_list = intersect_area_list[:valid]
pred_area_list = pred_area_list[:valid]
label_area_list = label_area_list[:valid]
for i in range(len(intersect_area_list)):
intersect_area_all = intersect_area_all + intersect_area_list[
i]
pred_area_all = pred_area_all + pred_area_list[i]
label_area_all = label_area_all + label_area_list[i]
else:
intersect_area_all = intersect_area_all + intersect_area
pred_area_all = pred_area_all + pred_area
label_area_all = label_area_all + label_area
batch_cost_averager.record(time.time() - batch_start,
num_samples=len(label))
batch_cost = batch_cost_averager.get_average()
reader_cost = reader_cost_averager.get_average()
if local_rank == 0 and print_detail:
progbar_val.update(iter + 1, [('batch_cost', batch_cost),
('reader cost', reader_cost)])
reader_cost_averager.reset()
batch_cost_averager.reset()
batch_start = time.time()
class_iou, miou = metrics.mean_iou(intersect_area_all, pred_area_all,
label_area_all)
class_acc, acc = metrics.accuracy(intersect_area_all, pred_area_all)
kappa = metrics.kappa(intersect_area_all, pred_area_all, label_area_all)
if print_detail:
logger.info(
"[EVAL] #Images={} mIoU={:.4f} Acc={:.4f} Kappa={:.4f} ".format(
len(eval_dataset), miou, acc, kappa))
logger.info("[EVAL] Class IoU: \n" + str(np.round(class_iou, 4)))
logger.info("[EVAL] Class Acc: \n" + str(np.round(class_acc, 4)))
return miou, acc
def evaluate(
img_dir,
gt_dir,
num_classes,
ignore_index=255,
print_detail=True,
):
"""
Launch evalution.
Args:
eval_dataset (paddle.io.Dataset): Used to read and process validation datasets.
aug_eval (bool, optional): Whether to use mulit-scales and flip augment for evaluation. Default: False.
scales (list|float, optional): Scales for augment. It is valid when `aug_eval` is True. Default: 1.0.
flip_horizontal (bool, optional): Whether to use flip horizontally augment. It is valid when `aug_eval` is True. Default: True.
flip_vertical (bool, optional): Whether to use flip vertically augment. It is valid when `aug_eval` is True. Default: False.
is_slide (bool, optional): Whether to evaluate by sliding window. Default: False.
stride (tuple|list, optional): The stride of sliding window, the first is width and the second is height.
It should be provided when `is_slide` is True.
crop_size (tuple|list, optional): The crop size of sliding window, the first is width and the second is height.
It should be provided when `is_slide` is True.
num_workers (int, optional): Num workers for data loader. Default: 0.
print_detail (bool, optional): Whether to print detailed information about the evaluation process. Default: True.
Returns:
float: The mIoU of validation datasets.
float: The accuracy of validation datasets.
"""
intersect_area_all = 0
pred_area_all = 0
label_area_all = 0
image_list, _ = get_image_list(img_dir)
for im_path in image_list:
im_name = osp.basename(im_path)
gt_path = osp.join(gt_dir, im_name)
img = paddle.to_tensor(np.asarray(Image.open(im_path)), dtype='int32')
gt = paddle.to_tensor(np.asarray(Image.open(gt_path)), dtype='int32')
img = paddle.unsqueeze(img, axis=[0, 1])
gt = paddle.unsqueeze(gt, axis=[0, 1])
ori_shape = gt.shape[-2:]
pred = F.interpolate(img, ori_shape, mode='nearest')
intersect_area, pred_area, label_area = metrics.calculate_area(
pred, gt, num_classes, ignore_index=ignore_index)
intersect_area_all = intersect_area_all + intersect_area
pred_area_all = pred_area_all + pred_area
label_area_all = label_area_all + label_area
class_iou, miou = metrics.mean_iou(intersect_area_all, pred_area_all,
label_area_all)
class_acc, acc = metrics.accuracy(intersect_area_all, pred_area_all)
kappa = metrics.kappa(intersect_area_all, pred_area_all, label_area_all)
if print_detail:
print("#Images: {} \nmIoU: {} \nAcc: {} \nKappa: {} ".format(
len(image_list), miou, acc, kappa))
print("Class IoU: " + str(class_iou))
print("Class Acc: " + str(class_acc))
metrics_dict = {}
metrics_dict['#Images'] = len(image_list)
metrics_dict['mIoU'] = miou
metrics_dict['Acc'] = acc
metrics_dict['Kappa'] = kappa
metrics_dict['Class IoU'] = class_iou
metrics_dict['Class Acc'] = class_acc
return metrics_dict
def evaluate(model,
eval_dataset,
aug_eval=False,
scales=1.0,
flip_horizontal=True,
flip_vertical=False,
is_slide=False,
stride=None,
crop_size=None,
num_workers=0):
model.eval()
nranks = paddle.distributed.ParallelEnv().nranks
local_rank = paddle.distributed.ParallelEnv().local_rank
if nranks > 1:
# Initialize parallel environment if not done.
if not paddle.distributed.parallel.parallel_helper._is_parallel_ctx_initialized(
):
paddle.distributed.init_parallel_env()
batch_sampler = paddle.io.DistributedBatchSampler(
eval_dataset, batch_size=1, shuffle=False, drop_last=False)
loader = paddle.io.DataLoader(
eval_dataset,
batch_sampler=batch_sampler,
num_workers=num_workers,
return_list=True,
)
total_iters = len(loader)
intersect_area_all = 0
pred_area_all = 0
label_area_all = 0
logger.info("Start evaluating (total_samples={}, total_iters={})...".format(
len(eval_dataset), total_iters))
progbar_val = progbar.Progbar(target=total_iters, verbose=1)
timer = Timer()
for iter, (im, label) in enumerate(loader):
reader_cost = timer.elapsed_time()
label = label.astype('int64')
ori_shape = label.shape[-2:]
if aug_eval:
pred = infer.aug_inference(
model,
im,
ori_shape=ori_shape,
transforms=eval_dataset.transforms.transforms,
scales=scales,
flip_horizontal=flip_horizontal,
flip_vertical=flip_vertical,
is_slide=is_slide,
stride=stride,
crop_size=crop_size)
else:
pred = infer.inference(
model,
im,
ori_shape=ori_shape,
transforms=eval_dataset.transforms.transforms,
is_slide=is_slide,
stride=stride,
crop_size=crop_size)
intersect_area, pred_area, label_area = metrics.calculate_area(
pred,
label,
eval_dataset.num_classes,
ignore_index=eval_dataset.ignore_index)
# Gather from all ranks
if nranks > 1:
intersect_area_list = []
pred_area_list = []
label_area_list = []
paddle.distributed.all_gather(intersect_area_list, intersect_area)
paddle.distributed.all_gather(pred_area_list, pred_area)
paddle.distributed.all_gather(label_area_list, label_area)
# Some image has been evaluated and should be eliminated in last iter
if (iter + 1) * nranks > len(eval_dataset):
valid = len(eval_dataset) - iter * nranks
intersect_area_list = intersect_area_list[:valid]
pred_area_list = pred_area_list[:valid]
label_area_list = label_area_list[:valid]
for i in range(len(intersect_area_list)):
intersect_area_all = intersect_area_all + intersect_area_list[i]
pred_area_all = pred_area_all + pred_area_list[i]
label_area_all = label_area_all + label_area_list[i]
else:
intersect_area_all = intersect_area_all + intersect_area
pred_area_all = pred_area_all + pred_area
label_area_all = label_area_all + label_area
batch_cost = timer.elapsed_time()
timer.restart()
if local_rank == 0:
progbar_val.update(iter + 1, [('batch_cost', batch_cost),
('reader cost', reader_cost)])
class_iou, miou = metrics.mean_iou(intersect_area_all, pred_area_all,
label_area_all)
class_acc, acc = metrics.accuracy(intersect_area_all, pred_area_all)
kappa = metrics.kappa(intersect_area_all, pred_area_all, label_area_all)
logger.info("[EVAL] #Images={} mIoU={:.4f} Acc={:.4f} Kappa={:.4f} ".format(
len(eval_dataset), miou, acc, kappa))
logger.info("[EVAL] Class IoU: \n" + str(np.round(class_iou, 4)))
logger.info("[EVAL] Class Acc: \n" + str(np.round(class_acc, 4)))
return miou, acc
