def getInputs (self):
""" get a dictionary of input types used in simulation
with distal/proximal specificity for evoked,ongoing inputs
"""
dinty = {'Evoked':False,'Ongoing':False,'Poisson':False,'Tonic':False,'EvokedDist':False,\
'EvokedProx':False,'OngoingDist':False,'OngoingProx':False}
try:
dinty['Evoked'] = usingEvokedInputs(dfile['outparam'])
dinty['EvokedDist'] = usingEvokedInputs(dfile['outparam'], lsuffty = ['_evdist_'])
dinty['EvokedProx'] = usingEvokedInputs(dfile['outparam'], lsuffty = ['_evprox_'])
dinty['Ongoing'] = usingOngoingInputs(dfile['outparam'])
dinty['OngoingDist'] = usingOngoingInputs(dfile['outparam'], lty = ['_dist'])
dinty['OngoingProx'] = usingOngoingInputs(dfile['outparam'], lty = ['_prox'])
dinty['Poisson'] = usingPoissonInputs(dfile['outparam'])
dinty['Tonic'] = usingTonicInputs(dfile['outparam'])
except:
pass
return dinty
'L5_pyramidal' : 'r',
'L2_basket' : 'w',
'L5_basket' : 'b'}
ntrial = 1; tstop = -1; outparamf = spkpath = paramf = ''; EvokedInputs = OngoingInputs = PoissonInputs = False;
for i in range(len(sys.argv)):
if sys.argv[i].endswith('.txt'):
spkpath = sys.argv[i]
elif sys.argv[i].endswith('.param'):
paramf = sys.argv[i]
tstop = paramrw.quickgetprm(paramf,'tstop',float)
ntrial = paramrw.quickgetprm(paramf,'N_trials',int)
EvokedInputs = paramrw.usingEvokedInputs(paramf)
OngoingInputs = paramrw.usingOngoingInputs(paramf)
PoissonInputs = paramrw.usingPoissonInputs(paramf)
outparamf = os.path.join(dconf['datdir'],paramf.split('.param')[0].split(os.path.sep)[-1],'param.txt')
try:
extinputs = spikefn.ExtInputs(spkpath, outparamf)
except ValueError:
print("Error: could not load spike timings from %s" % spkpath)
extinputs.add_delay_times()
alldat = {}
ncell = len(net.cells)
binsz = 5.0
smoothsz = 0 # no smoothing