from pith import Pith
p = Pith()
l = '8 :&: int :&: TYPE :&: 1 :&: NEW :&: run :&: FIELD :&: 38 :&: int :&: TYPE :&: 1 :&: NEW :&: clone :&: FIELD :&: 291 :&: int :&: TYPE :&: 1 :&: NEW :&: gen :&: FIELD :&: 984 :&: int :&: TYPE :&: 1 :&: NEW :&: frame :&: FIELD :&: 4.21349235547 :&: float :&: TYPE :&: 1 :&: NEW :&: rmsd :&: FIELD :&: protolyze.db.results.Result :&: SOMETYPE :&: 5 :&: OBJECT'
obj = p.read(l)
print dir(obj)
orig = obj.construct_original()
print type(orig)
print dir(orig)
print orig.primary_key()
print obj
for k,v in obj.__dict__.iteritems():
print '\t', k,'=', v
print p.show(obj)
# Test sequences
from pith import Pith
p = Pith(sep="|")
for grp in [(1, 2, 3), [1, 2, 3], {"a": 1, "b": 2, "c": 3}, [42, {"hello": "world"}], {}, {True: False}]:
print type(grp), grp
s = p.show(grp)
print "show:", s
r = p.read(s)
print "read:", r
print "success =", grp == r
from pith import Pith s = "/pscratch/csweet1/lcls/fah/data/PROJ10012/RUN3404/CLONE0/results-001.xtc :&: str :&: TYPE :&: 1 :&: NEW :&: trajectory :&: FIELD :&: 750 :&: int :&: TYPE :&: 1 :&: NEW :&: frame :&: FIELD :&: 1.1131634 :&: float :&: TYPE :&: 1 :&: NEW :&: rmsd :&: FIELD :&: __main__.RMSD_Result :&: SOMETYPE :&: 3 :&: OBJECT" s = "list :&: TYPE :&: 0 :&: NEW" s = "list :&: TYPE :&: 0 :&: NEW :&: _extra_dbcolumns :&: FIELD :&: 3404 :&: int :&: TYPE :&: 1 :&: NEW :&: run :&: FIELD :&: 0 :&: int :&: TYPE :&: 1 :&: NEW :&: clone :&: FIELD :&: 1 :&: int :&: TYPE :&: 1 :&: NEW :&: gen :&: FIELD :&: list :&: TYPE :&: 0 :&: NEW :&: _fields :&: FIELD :&: 750 :&: int :&: TYPE :&: 1 :&: NEW :&: frame :&: FIELD :&: protolyze.db.results.Result :&: SOMETYPE :&: 6 :&: OBJECT" p = Pith(debug=False) print p.read(s)
from pith import Pith
import protolyze.db.results as dbr
DEBUG=False
p = Pith(debug=DEBUG)
r = dbr.Result(run=1,clone=2,gen=3,frame=4)
column_name = 'my_column_name'
column = dbr.DBColumn()
column.set_name(column_name)
column.set_type('float')
column.set_column_kwargs(index=True)
s = p.show(column)
read = p.read(s)
print 'show ', s
print 'original', column
print 'read ', read
print 'recreate', read.construct_original(debug=DEBUG)
# r.value(column, 42)
# shown = r.show()
# print 'shown =', shown
# read = p.read(shown)
# print 'read =', read.construct_original().__dict__