backbonefull
bbfull
backbone atoms of :term:`protein` residues, same as selection
``'name CA C O N H H1 H2 H3 OXT and protein'``
sidechain
sc
side-chain atoms of :term:`protein` residues, same as selection
``'protein and not backbonefull'``
""".format(
stdaa = wrapText('indicates the standard amino acid residues: ' +
joinLinks(DEFAULTS['stdaa'], last=', and ', sort=True),
subsequent_indent=' '*6),
)
cats = list(CATEGORIZED)
cats.sort()
for cat in cats:
res = CATEGORIZED[cat]
res.sort()
__doc__ += """
{cat:s}
{res:s}
backbonefull
bbfull
backbone atoms of :term:`protein` residues, same as selection
``'name CA C O N H H1 H2 H3 OXT and protein'``
sidechain
sc
side-chain atoms of :term:`protein` residues, same as selection
``'protein and not backbonefull'``
""".format(
stdaa=wrapText('indicates the standard amino acid residues: ' +
joinLinks(DEFAULTS['stdaa'], last=', and ', sort=True),
subsequent_indent=' ' * 6))
cats = list(CATEGORIZED)
cats.sort()
for cat in cats:
res = CATEGORIZED[cat]
res.sort()
__doc__ += """
{cat}
{res}
""".format(cat=cat,
res=wrapText('residues ' + ', '.join(res),
subsequent_indent=' ' * 6))