def wizardBrowse(gui, var):
if 'file' in var.tags.keys():
seltype="file"
filterExt = var.tags['file']
else:
seltype="folder"
filterExt = ''
files = showBrowseDialog(parent=gui.master, seltype=seltype, filter=filterExt)
if files:
var.setTkValue(', '.join([xmippRelpath(f) for f in files]))
def importImages(log, InputFile, WorkingDir, DoCopy, ImportAll, SubsetMode, Nsubset):
imagesFn = getImagesFilename(WorkingDir)
fnInput = FileName(InputFile)
md = MetaData(InputFile)
#check if micrographs or ctfparam exists
doMic=False
doCTFParam=False
if md.containsLabel(MDL_MICROGRAPH):
doMic = True
if md.containsLabel(MDL_CTF_MODEL):
doCTFParam = True
if fnInput.isMetaData():
inputRelativePath = dirname(relpath(InputFile, '.'))
projectPath = findProjectPath(InputFile)
for id in md:
imgFn = md.getValue(MDL_IMAGE, id)
imgNo, imgFn = splitFilename(imgFn)
imgFn = xmippRelpath(fixPath(imgFn, projectPath, inputRelativePath, '.'))
if imgNo != None:
imgFn = "%s@%s" % (imgNo, imgFn)
md.setValue(MDL_IMAGE, imgFn, id)
#micrograph
if doMic:
imgFn = md.getValue(MDL_MICROGRAPH, id)
imgNo, imgFn = splitFilename(imgFn)
imgFn = xmippRelpath(fixPath(imgFn, projectPath, inputRelativePath, '.'))
if imgNo != None:
imgFn = "%s@%s" % (imgNo, imgFn)
md.setValue(MDL_MICROGRAPH, imgFn, id)
#ctf param
if doCTFParam:
ctfFn = md.getValue(MDL_CTF_MODEL, id)
ctfFn = xmippRelpath(fixPath(ctfFn, projectPath, inputRelativePath, '.'))
md.setValue(MDL_CTF_MODEL, ctfFn, id)
outExt = '.stk'
else:
outExt = '.%s' % fnInput.getExtension()
imagesStk = imagesFn.replace('.xmd', outExt)
writeImagesMd(log, md, ImportAll, SubsetMode, Nsubset, imagesFn, imagesStk, DoCopy)
